KEGG   Osmerus eperlanus (European smelt): 134034682
Entry
134034682         CDS       T10927                                 
Symbol
vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oep00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134034682 (vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oep03019]
    134034682 (vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oep04812]
    134034682 (vim)
   04147 Exosome [BR:oep04147]
    134034682 (vim)
Messenger RNA biogenesis [BR:oep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     134034682 (vim)
Cytoskeleton proteins [BR:oep04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     134034682 (vim)
Exosome [BR:oep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134034682 (vim)
  Exosomal proteins of other cancer cells
   134034682 (vim)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 Tropomyosin DUF7491 BLOC1_2 HALZ AdoHcyase TPR_MLP1_2
Other DBs
NCBI-GeneID: 134034682
NCBI-ProteinID: XP_062335181
LinkDB
Position
15:complement(5683463..5690567)
AA seq 459 aa
MLSNRSTTTRQPSSYKRMFGGERPAMARSTFSSRQYSSPVRSSRMSYSVSSAPPSIFASK
TTRLRSSAPMPRLSSDNVDFALSDAINMEFKANRTNEKAEMIHLNDRFANYIDKVRFLEQ
QNKILIAELEQLKGKGTSRIGDLYEDEMRELRRQVDQLTNEKARVEVDRDNLGDDIERLR
EKLQEEMLQKEEAEHNLQSFRQDVDNASLARLDLERKVESLQEEIIFLRKVHDEEVADLH
AQMHEQHVQIDMDVVKPDLTTALRDVRLQYETLANKNMQDSEDWYKSKFTDLTEAAARNT
DAIRQAKQDANEYRRQVQVLTCDVEALKGTNESLERQMRELEETFGLEAANYQDTIIRLE
DDIRNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITTPMPNFSSFNLRES
MVEARPMIDSLSKKVLIKTIETRDGHVINESTQNHDELE
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgttgagcaaccggtcaaccaccacccggcaaccctcctcctacaagaggatgttcggc
ggagagcgtcccgcaatggcccggtcgactttctcaagccgccagtactcgagccccgtg
cgctcctccaggatgtcctatagtgtgtcctccgcgccgcctagcatcttcgcatccaag
actacccgtctccgtagcagtgccccaatgccccgactttcatcggataatgttgacttc
gctctctcggatgccatcaacatggagttcaaagccaacaggaccaacgaaaaagcggag
atgatacatctcaacgacaggttcgccaactatatcgacaaggtgcgatttctggagcag
cagaataagattttgatcgcggagctggagcagctcaaagggaaaggaacgtcccgcatc
ggggacctatacgaggatgagatgagagaactacggcggcaggtggaccagctgacaaat
gagaaagctcgggtcgaagtggaccgggacaacctgggggacgacatagagcggctcaga
gaaaaacttcaggaggaaatgctgcagaaagaggaggcagaacataacctacagagcttc
agacaggatgtggacaacgcctccctggcccgcctggacctggagaggaaggtggagtct
ctacaggaggagatcatcttcctcaggaaggtgcatgatgaggaggtcgctgacctgcat
gctcagatgcacgagcagcatgttcagatagacatggacgtggtcaagcctgacctgacc
accgctctgagggatgtccggctgcagtacgagactctggccaacaagaacatgcaggat
tccgaggactggtacaagtcaaagttcaccgacctgactgaggcggcggcgcgcaacacc
gacgccattcgccaggccaagcaggatgccaacgagtacaggcgtcaagtgcaagtcctc
acctgcgacgtggaagccctcaaaggaacgaacgagtctctggaacgacagatgagggag
ctggaggagaccttcggcctggaggcggctaactaccaggacaccatcatccgtctggag
gatgacatccgcaacatgaaggacgagatggcccgccacctcagggagtaccaggacctg
ctcaacgtcaagatggccctggacatcgagatcgccacctacaggaaacttctggaggga
gaggagagcagaattaccactcctatgcccaacttctcttctttcaacctgagagaatcc
atggtggaggctcggccaatgattgacagcctgtccaaaaaggttctgatcaagactatt
gagaccagagatggacatgtcatcaatgagtcgacccagaatcatgatgagcttgagtga

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