Osmerus eperlanus (European smelt): 134034682
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Entry
134034682 CDS
T10927
Symbol
vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134034682 (vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134034682 (vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134034682 (vim)
04147 Exosome [BR:
oep04147
]
134034682 (vim)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
134034682 (vim)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
134034682 (vim)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134034682 (vim)
Exosomal proteins of other cancer cells
134034682 (vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Tropomyosin
DUF7491
BLOC1_2
HALZ
AdoHcyase
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
134034682
NCBI-ProteinID:
XP_062335181
LinkDB
All DBs
Position
15:complement(5683463..5690567)
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AA seq
459 aa
AA seq
DB search
MLSNRSTTTRQPSSYKRMFGGERPAMARSTFSSRQYSSPVRSSRMSYSVSSAPPSIFASK
TTRLRSSAPMPRLSSDNVDFALSDAINMEFKANRTNEKAEMIHLNDRFANYIDKVRFLEQ
QNKILIAELEQLKGKGTSRIGDLYEDEMRELRRQVDQLTNEKARVEVDRDNLGDDIERLR
EKLQEEMLQKEEAEHNLQSFRQDVDNASLARLDLERKVESLQEEIIFLRKVHDEEVADLH
AQMHEQHVQIDMDVVKPDLTTALRDVRLQYETLANKNMQDSEDWYKSKFTDLTEAAARNT
DAIRQAKQDANEYRRQVQVLTCDVEALKGTNESLERQMRELEETFGLEAANYQDTIIRLE
DDIRNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITTPMPNFSSFNLRES
MVEARPMIDSLSKKVLIKTIETRDGHVINESTQNHDELE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcaaccggtcaaccaccacccggcaaccctcctcctacaagaggatgttcggc
ggagagcgtcccgcaatggcccggtcgactttctcaagccgccagtactcgagccccgtg
cgctcctccaggatgtcctatagtgtgtcctccgcgccgcctagcatcttcgcatccaag
actacccgtctccgtagcagtgccccaatgccccgactttcatcggataatgttgacttc
gctctctcggatgccatcaacatggagttcaaagccaacaggaccaacgaaaaagcggag
atgatacatctcaacgacaggttcgccaactatatcgacaaggtgcgatttctggagcag
cagaataagattttgatcgcggagctggagcagctcaaagggaaaggaacgtcccgcatc
ggggacctatacgaggatgagatgagagaactacggcggcaggtggaccagctgacaaat
gagaaagctcgggtcgaagtggaccgggacaacctgggggacgacatagagcggctcaga
gaaaaacttcaggaggaaatgctgcagaaagaggaggcagaacataacctacagagcttc
agacaggatgtggacaacgcctccctggcccgcctggacctggagaggaaggtggagtct
ctacaggaggagatcatcttcctcaggaaggtgcatgatgaggaggtcgctgacctgcat
gctcagatgcacgagcagcatgttcagatagacatggacgtggtcaagcctgacctgacc
accgctctgagggatgtccggctgcagtacgagactctggccaacaagaacatgcaggat
tccgaggactggtacaagtcaaagttcaccgacctgactgaggcggcggcgcgcaacacc
gacgccattcgccaggccaagcaggatgccaacgagtacaggcgtcaagtgcaagtcctc
acctgcgacgtggaagccctcaaaggaacgaacgagtctctggaacgacagatgagggag
ctggaggagaccttcggcctggaggcggctaactaccaggacaccatcatccgtctggag
gatgacatccgcaacatgaaggacgagatggcccgccacctcagggagtaccaggacctg
ctcaacgtcaagatggccctggacatcgagatcgccacctacaggaaacttctggaggga
gaggagagcagaattaccactcctatgcccaacttctcttctttcaacctgagagaatcc
atggtggaggctcggccaatgattgacagcctgtccaaaaaggttctgatcaagactatt
gagaccagagatggacatgtcatcaatgagtcgacccagaatcatgatgagcttgagtga
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