Osmerus eperlanus (European smelt): 134034713
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Entry
134034713 CDS
T10927
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134034713 (smarcd3b)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134034713 (smarcd3b)
PBAF complex
134034713 (smarcd3b)
GBAF(ncBAF) complex
134034713 (smarcd3b)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134034713
NCBI-ProteinID:
XP_062335254
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Position
15:11608341..11633094
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AA seq
505 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PTPVMEPSRKRPAPSQQVQQQAVQNRSRKKPVGFPGANEMPARQMDMRDAQSDPTLGSNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDP
IVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQEA
VSRYFYCKIQQRRQELEQALAVRNT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccgtctggagcgcggatgccccaccagggg
gctcccatgggccccccaggccccccgtacgggggcagccctgcagtgcggcccggcctg
cccacccccgttatggaacccagccgcaagagacccgccccctcccagcaggtccagcag
caggctgtccagaaccgctccaggaagaagcctgtgggattccctggagccaatgagatg
ccggcgaggcagatggacatgagagatgcccaatcagatcccacgctcggatcaaatgcc
aagcggaggaaaatggcagacaagattcttccacaaaggatccgtgagctggtcccagag
tcccaggcctacatggacctgctggcctttgagaggaagctagaccagaccatcatgagg
aagcgggtggacatccaggaggccctgaagagacccatgaaacaaaagcgtaaactgcgt
ctgtacatctccaacaccttcaaccctgccaagcccgatgctgacgactcagatgggagc
attgcatcctgggagttgcgtgttgagggaaagctgctagatgatcctgggaagctgaag
aggaagttctcctcgttcttcaagagcctggtgatcgagctggataaagacctgtacgga
cccgacaaccacctggttgagtggcaccgtacgcccaccacacaggagacggacggtttc
caggtgaagaggcccggagacgtgagcgtgcgctgcaccctcctgctgatgctggactac
cagccccctcagttcaagctggacccacggctggcacgtctgctgggcattcacacccag
acccgctcctgtatcatccaggctctctggcagtacgtcaagaccaacaagctacaggac
tcccacgacaaggagtacatcaactgtgacaagtacttccagcagatctttgactgcccc
cgactgaagttctcagagatccctcagcgcctcaccaacctcctcctgccccccgacccc
atcgtcatcaatcacgtcatcagtgtggaccctaacgatcagaagaagacagcctgctat
gacatcgacgtggaggtggaggaccccctgaaaagccagatgagcagcttcctgctctcc
acagccaatcagcaggagatcgcctccctggacaacaagatccacgagaccatcgagtca
atcaaccagctgaagatccagagggatttcatgctcagcttctccagagatcccaagggc
tacatccaggactggctcaaatctcagagcagagacctgaagcttatgacggatgtggtt
gggaacccagaggaggagaggagggcggagttttaccacgagccctggtcccaggaggca
gtgagccgctacttctactgcaagattcagcagaggagacaggagctggagcaggccttg
gctgtgagaaacacctaa
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