Osmerus eperlanus (European smelt): 134034721
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Entry
134034721 CDS
T10927
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134034721 (ptbp2a)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134034721 (ptbp2a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
134034721
NCBI-ProteinID:
XP_062335267
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All DBs
Position
15:5202971..5212774
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AA seq
519 aa
AA seq
DB search
MDGDVAVGVKRGSDELLSSSLYNSPNSGMSSISDGTSNGSDSKKPRVEEAPPSRVLHIRK
LPNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMETEEAAMTMVNYYLTVTPNVRNVP
VFIQYSKHTELKTDAGNQRTQAVLQAVSAVQSGGTPTSGSALSESALTAASSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQAKLALDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPAGDGQPAMDPSAFTKDSNSLLGKIPGAL
SPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLNEEMITPQSLFTLFGVYGDCQRVKILY
NKKDSALIQMADANQAQLAMSHLNGQKMYGKVIRVALSKHQTVALPRDGLDDQGLTKDFT
NSPLHRFKKPGSKNFQNIFPPSITLHLSNIPQDVTEEDLRLLFSNAGGTVTAFKFFQDHK
MALLQMSAVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcagttggtgtgaagaggggctcggatgagctgttgtcaagcagc
ctctacaacagtcccaactctggcatgagcagtatcagtgacgggacgtccaacggcagc
gacagcaagaagccgcgagtggaggaggccccgccctcgcgcgtcctccacatccgcaag
ctgcccaacgaggcgtccgagacggaggtcatcgccctggggctgcccttcgggaaggtc
accaacatcctcacgctgaagggcaagaaccaggccttcctggagatggagacggaggag
gcggccatgaccatggtcaactactacctgaccgtgacccccaacgtgcgcaacgtgccc
gtgttcatccagtactccaaacacacagagctgaagacggacgcggggaaccagaggacc
caggcagtgctgcaggcggtgtcggccgtccaatcaggcggcacacccacctcaggctcc
gccctgagcgagagtgccctgacggcagcctccagccccgtcctcaggatcatcatcgac
aacatgttctaccccgtcaccctggacgtgctgcagcagatcttctccaagtttggcacg
gtgatgaagatcatcacgttcaccaagaacaaccagttccaggccctgctgcagttcagc
gagcctgttaacgcacagcaggcaaagctggctctggacggccagaacatctacaactca
tgctgcaccctgcgcatcgacttctccaagctggtcaacctgaacgtcaagtacaacaac
gacaagtcccgggactacacaagaccagacctgcctgccggggacggccagcccgccatg
gacccctcagccttcaccaaggactccaactccctgctcggtaagatcccaggtgccctc
agccccctgaacgctgccgccgccgcagccgcggccgccggccgagtggccctgtctgga
cactccggctccagcggagtcttgttggccagcaacctgaacgaggagatgatcacgccc
caaagtctctttactctcttcggcgtgtacggggactgccagcgggtcaagatcctgtac
aacaagaaggacagcgcgctcatccagatggccgacgccaaccaggcccagctagccatg
agccacctgaacggtcagaagatgtacggtaaggtgatccgggtggccctgtccaagcac
cagacagtggccctgccccgcgacggcctggacgaccagggcctcaccaaggacttcacc
aactcccccctgcaccgcttcaaaaagcccggctccaagaacttccagaacatcttcccc
ccctccatcacgctccacctctccaacatccctcaagacgtgacggaagaggacctccgg
ctgctcttctccaacgccggcggcactgtgacagccttcaagtttttccaggaccacaag
atggctctcctgcagatgtctgctgtggaggaggccatccaggccctgatcgacctacac
aactacaacatgggaggcaaccagcacctgagggtctccttctccaagtccaccatctga
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