Osmerus eperlanus (European smelt): 134034755
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Entry
134034755 CDS
T10927
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134034755 (zeb1b)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
134034755 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-met
zf-H2C2_5
RodZ_C
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
134034755
NCBI-ProteinID:
XP_062335316
LinkDB
All DBs
Position
15:complement(10217548..10264818)
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AA seq
1126 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVANYGNVVEGASDSDDEDKLHIVEEEGSLPDGADCDSNLHE
EERNGDRWDEVREGCGSDGEDAGSTDALVEEMLQQGDTAVIYPEAPEEEPRQGTPEASSH
DENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKSEDNFSCSQCSYTFTYRTQLER
HMTAHKAGREQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKKRF
SHSGSYSSHISSKKCVSLITVNGRPRSGAKTQAQSPAMPSSPAALRTQTRDKPEHGKPLQ
EQLPLNQIKSEPLDYEYKPAMVVSPTGVNGVFNGGGVAAPLQGAVQAVVLPTVGLVSPIS
INLADLQNVLKVAVDSNMIRQVLENNAKGQPGAGPLHSQQQLISAISLPIMGQDGNAKII
INYSLDPAQAQAQLTAQNLKKEPLAPASAQIHLQAHPEACKGQKLPEDLTVRLSREREAK
EETKMEEKTTSTCLLCDDCPGGLDTLHALKHCKKEGLRIKGRGLDQSESAIAALLADGDL
CPDQPKNLLSLLKAYFALNAAPTKEELSKISNSVSLPTHVVKKWFDKMQEGQISLGAPTP
PSEAEDEGDGFIPEGTTALLSAETPVRAQVSPAEATQAEVDGASVSPTSPSPLNLTAGGP
VPAEPPQGAEGPLDLSLPKPTREEAQRAAARAKLHPSSSRRSAQQDEPLNLTCIKKEPGT
SPVPFYASLPSANPINIMTTQLPTLVTITDPSRVPCLRTLTTTTKQAILIPQLTYTYTTT
ASNPAANQMQDKTVLLNGIKEERQDTSSEGVSTLEEQNDSDSAPPRKKMRKTESGMYACD
LCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGK
RFSHSGSYSQHMNHRYSYCKKEAQGGGGGQDSPEEEGDTAADMVLSVGEVQSDSRATSPP
SHLDSDERGSSAREDEDSEEEEEEEDMETTAGGLDEGVLDMDEIQVVKIGEEGGEEEEEE
EEGEEGGQNGEDMEEEGVEQVVVGGDGEEEEVEREERDEEVDTRQGEGQENTKKGEEAQV
ESEKSVVEDYDVIKEDEGATNGNSEKNTVFEDKNQTPGEKEEGDTK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgtt
gcaaactacggcaatgtggtggagggtgcgtcggattcggatgacgaggacaagctgcac
atcgtggaggaggagggcagtctgccggacggggcggactgtgacagcaacctccacgag
gaagaacgcaacggggaccgctgggacgaagtgagggaggggtgcggctcagacggcgag
gatgcgggcagcacagacgccctggtggaagagatgctgcagcagggcgacacagccgtc
atttacccagaagccccggaggaggagccgcggcagggcacgcccgaggccagcagccac
gacgagaacggcactccagactcgttctcccagctcctcacctgcccctactgtgcacgg
ggctacaagcgctactcctctctgaaggagcacatcaagtaccgccacgagaagagcgag
gacaacttcagctgctcccagtgcagctacaccttcacctaccgcacgcagctggagagg
cacatgacggcccacaaggctggacgagagcagagacacgtgacacagtcagggggcaac
cgcaaattcaagtgcactgaatgtggaaaggcttttaaatacaagcaccacctgaaggag
cacctacgtatccacagcggagagaaaccctacgagtgctccaactgcaaaaaacgtttc
tcccactccggctcctacagctcgcacatcagcagcaagaagtgtgtcagcctcatcaca
gtcaacggacgacccagatcgggagccaagacccaggcccagtccccggccatgccctcc
tcaccggccgccctccggacacagacccgggacaagccggagcacggcaagcccctgcag
gagcagctgcccctcaaccagatcaagagcgagccactggattacgagtacaagcctgcc
atggtggtttccccaacgggggtcaacggggtcttcaacggggggggcgtggctgctcct
ctccagggtgcggtccaggcagtggtcctgcccaccgtgggcctggtgtcgcccatcagc
atcaacctggccgacctccagaacgttctgaaggtggcagtggacagtaacatgatccgg
caagttctggagaacaacgccaagggccagccgggcgcggggccgctgcactcccagcag
cagctcatctctgccatcagcctgcccatcatggggcaggacggcaacgccaagattatc
atcaactacagcctggaccctgcccaagcccaggcccagctcacagcccagaacctgaag
aaggagcccctggccccggcctcagcccaaatccacctccaggctcaccctgaggcctgc
aagggtcagaaactccctgaggatctgactgtgaggctgtcgagagagagagaagcaaag
gaggaaaccaagatggaggagaagaccactagcacctgtctgttgtgtgacgactgtccc
ggcggactggacacacttcacgccctcaagcactgcaagaaggagggcctcaggatcaag
ggcagaggcctggaccaatcagagtccgccatcgccgccctgctcgccgatggtgacctc
tgtccagaccagcccaagaacctgctctccctcctcaaggcgtactttgccttaaacgct
gcgcccactaaggaggaactgtccaagatctccaactccgtcagcctccccacccacgtg
gtcaagaagtggttcgacaagatgcaggaggggcagatctcgctgggggctcccaccccg
ccctctgaggcggaggatgagggggacggctttattccggagggtaccaccgccctcttg
agcgctgagacccctgttcgggcacaggtcagcccggccgaggccacccaggcagaggtc
gatggcgccagtgtcagccctacctccccctcgccactgaacctgaccgccggggggccg
gtcccggctgagcccccccagggtgccgagggacccctggacctgtcgctaccaaagccc
accagagaggaggcgcagagggctgcggccagggccaagctccacccctcctcctcccgc
cggtcggcccagcaggacgagcccctcaacttgacctgcatcaagaaggagcctggcacc
agccccgtccccttctacgccagcctgccaagtgccaaccccatcaacatcatgaccact
cagctgcccacgctcgtgaccatcactgacccgagccgggtgccctgcttgcggacgctc
acgaccaccaccaaacaggccatcctcatcccccagctgacatacacctataccactacg
gccagcaatccggcagccaatcagatgcaggacaagactgtgcttctcaacggcatcaag
gaggagaggcaggacaccagctcggagggcgtgtccacgctggaggagcagaacgactcg
gactccgcccctcccaggaagaagatgaggaagacggagagcggcatgtacgcctgcgac
ctgtgtgacaagatcttccagaagagcagctccctgctgagacacaaatacgaacacaca
gggaaaaggccccatgagtgtggcatctgcagaaaggccttcaagcacaagcaccacttg
atagaacacatgcgcctccactcaggagagaagccctaccagtgcgacaagtgcggcaag
cgcttctctcactccggctcctactcccagcacatgaaccaccgctactcctactgcaag
aaggaggcgcagggcggcggaggtgggcaggacagcccggaggaggagggcgacaccgcc
gccgacatggtcctgagcgtcggggaggtgcagtcagacagccgggccacctcgcctccc
tcccacctggactcagacgagcgaggcagcagcgccagggaggacgaggatagtgaggag
gaggaggaggaggaggacatggagacgacggcaggggggctggacgagggcgtcctagac
atggatgagatacaggtagtgaagataggggaggaaggaggggaggaggaggaggaggag
gaggaaggagaagaggggggtcagaatggagaggacatggaagaggagggggtggaacag
gtggtggtggggggagatggggaggaggaggaggtggagagggaagagagggatgaagag
gtagatacaaggcagggggaggggcaggagaacactaaaaaaggtgaggaagcacaggtg
gaatcagagaagagtgtggtggaggactatgatgtcatcaaagaggatgaaggtgcaaca
aatggaaacagtgaaaaaaacacggtttttgaagacaagaaccagactccaggagagaag
gaagaaggagacacaaaataa
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integrated database retrieval system
