Osmerus eperlanus (European smelt): 134034906
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Entry
134034906 CDS
T10927
Symbol
spata13
Name
(RefSeq) uncharacterized protein spata13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
134034906 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134034906 (spata13)
Membrane trafficking [BR:
oep04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
134034906 (spata13)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_2
SH3_9
PH_5
Motif
Other DBs
NCBI-GeneID:
134034906
NCBI-ProteinID:
XP_062335589
LinkDB
All DBs
Position
15:14243435..14258737
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AA seq
1322 aa
AA seq
DB search
MRRAGQKDGALSNSEDSLSCLPSSIADPGFPSLVRPLSDIYPLQGHVEQSPPPSRLPACG
ADVQPLNPDPHRINGLSRMNVLNSAAWPGPVTGHPEAKPYSSRIMKLFSNQRKSTLSGQS
GAPEMPSSLQGSSGTQAWPGLLGPGVLGSFKKLRSSVLQGIQNRGTANQDGQSAPEAHQD
RANGVVSTNLDPGQENGANQLASQFVAISPYGSENEEEEEEEGGLQRNTRFSQSIRRAYG
AGRILLLDTGQGKQPGSLDRGVTINQKPTLGSGSEANLHSEEGGGGNANILSRLSRSADN
LHLFKSQLRRKATYPPSPPSPPSPASPTLPAPPSPQPGCPGPPGADCPPGDEGAAGCPSV
EQRGRWRSPLRAKGHMLKLVGSVTDLTVRRRPSPSPSPSPTSPLSPLSRLHDDYSRRTPC
LPAGDRQRRPSPGRTRPDKRPLSTVSLDHAPSVHPPPPEHPASLPHPQDDATFLHQVLIS
PVPTDAGRGPDLTSDFPTLDQPIVTPSPPSAQAQGASLGEESAPQEGLGDGRGAGRHAPP
ALRGPPCGDQEESTSQADECIWTRPDPDPDDPNTTRDLQRREVLLQDDASPPANGFPQSP
TSLEAAGAPETPAATETPSSSSVNPRRRAGRTRPRPISDYGQLVSRKYSIPEEEAELQPE
ERTTNGTAKQDYKSNGGAMQMEGPEGFSMNGDVQRGRRRPMSVIGGVDLFCTPGTEERED
RLPSLLSRPPVPSHQVPPYRAVSARFRPSTFSQSTPIGLDRLGRRKLHRVLSEGGHEAVQ
DDSVSEEDGSFDELTDVTPYLQSGVELSALNEWIGSGIAVYAEALWDHVTMEEQELAFKA
GDVIRVLDASHKDWWWGMGGDREAWFPSSFVRVRVNQDEDSGGESMENAVDLDPVPRETH
STQHREQMRTNVIKEIMNTERIYIKHLRDICEGYIRQCRKHPSMFTEPQLKTIFSNIEDI
YKFQRQFLKDLEKKYNKEEPHLSEIGECFLLQGEGFSIYSEYCNTHPAASGELHRLMKLG
RYKHFFEACRLLQQMIDISISGFLLTPVQKICKYPLQLGELLKYTPKDHSDHSGVSDAYE
AMKNVASLINESKRRLESVDALAHWQVAILHWEGADILERSSELIHSGELTRTVRQGKTQ
QRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDQTEVVELPDGKDPDLGLNLRNALRLRH
AATLESLGVLCCRKTQDKQRWLQAFARERHRVKEDQEMGIKISEAQRKQAIFNARKSKKG
KMKTIGYSGSIPPHQQSLHPLHQRHVTVPTSVPQQQVFTLAEPKRKPSHLWYTFTRNAFF
KK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggcaggacagaaggatggagccttgtctaacagtgaggattccctctcctgc
cttccctcctccatagctgacccaggcttccccagcctggtccgccccctcagtgacatc
taccctctccagggacacgtggagcagtccccgcccccgtcccggctgcctgcgtgcggg
gctgatgtgcagccgctgaaccctgacccacacaggatcaacgggctgagcaggatgaat
gtgctgaacagtgccgcctggcccggccctgtcacaggccaccctgaagccaagccctac
agctccaggatcatgaagctcttctcgaaccagaggaagagcaccctctctgggcagagt
ggggctcctgagatgccctcctcccttcagggcagcagcgggacccaggcctggccgggc
ctgctgggcccgggggtcttgggctccttcaagaagctccgctcctcagttctccagggc
attcagaaccgagggacagccaatcaggatggacagtccgccccggaagcccatcaggac
agggccaatggtgtcgtttcgaccaatcttgacccagggcaggagaatggagccaatcaa
ctagcctcacagtttgtcgcaataagtccctatggctcagagaatgaggaggaggaggaa
gaggaaggagggttgcagaggaacacgcgtttctcccagagtatccggcgagcgtacgga
gcagggcgcatcctgctgctcgacacgggacaggggaaacagccggggagtttggaccgg
ggcgtcacgatcaatcagaagccgaccctggggtcgggatcagaggccaacctccactca
gaggagggtgggggcgggaacgcgaacattctgagccgactgagcaggagcgctgacaac
ctgcacctcttcaagagccagctgagacgcaaggccacctaccctccctcgcccccctcc
cctccctcgcccgcctcccctaccttgcccgcccctccctcgccccagccaggctgccca
gggccccccggggccgactgtcccccaggcgatgagggggcagccggctgcccgtccgtg
gagcagaggggccgctggaggagtcccctgagggccaagggccacatgctgaaactggtg
ggcagcgtgacggacctcacggtccgccgcagacccagcccctcccccagcccctccccc
acctcccccctgtcgccgctcagccgtctccacgacgactactcccgccgcaccccgtgc
ctgcccgccggcgaccgccagcgccggccgtctcctggcaggacccgaccggacaaacgg
ccgctgtccaccgtcagcctcgaccacgcgcccagcgttcaccctccccctccagaacac
cctgcgtcgctgccccacccccaggacgacgccaccttcctgcaccaggtcctcatcagc
cccgtccccacggatgctggcagaggaccagacctcacctctgacttccctactctggat
cagcccatagtgaccccctctcccccgagcgcccaggcccagggagcctccctgggggag
gagagcgcccctcaggagggcctgggagacgggcggggagcggggcgccatgcccctcca
gccctccgggggccgccctgcggagaccaggaggagagcacctcacaagctgatgagtgt
atatggaccagaccagacccagacccagatgatccgaatactacgcgagacctccagagg
agggaagtcctccttcaggacgatgcctctcctcctgctaacggcttcccacaatccccc
acatcactcgaggcagctggcgccccggagacgcccgcagccacggaaacgccgtcctct
tcgtctgtcaatcccagaaggagggcggggcgaacaaggcctcggccaatctctgactac
ggccagctggtgtccaggaagtactccattcctgaggaggaggcggagctgcaacctgag
gagaggactacaaatggaacagccaaacaggactacaaaagcaatggcggagccatgcag
atggagggcccggagggattcagcatgaacggggatgtccagagagggaggagacgcccg
atgtctgttattggaggagtcgacctgttttgtacgcccggtaccgaggagagagaggac
cggctcccctcgctcctgtcccggcccccagttccctcccaccaggttcccccctacagg
gccgtctctgccaggttccgcccctccaccttctcccagagcacccccatcggactggac
cgcctgggaagacgcaagctgcacagagtcctgagcgagggcggccatgaggctgtgcag
gacgacagcgtgagcgaagaagacgggagcttcgacgagctcacagacgtcactccctat
ctgcagtctggggtggaactgtccgctctaaatgagtggattggctcgggcattgctgtg
tatgcggaggcgctgtgggaccatgtgaccatggaggagcaggaactggccttcaaggct
ggggatgtgatccgcgtgctggatgcctcccacaaggactggtggtggggtatgggagga
gaccgtgaggcctggttcccctccagctttgtcagggtgcgtgtaaaccaggacgaggac
tctgggggagagagtatggagaacgctgtggacctggaccccgtccccagagaaacacac
agcacccagcacagggagcagatgaggaccaacgtcatcaaagagattatgaacacagag
cgcatctacatcaaacacctcagagacatctgtgagggttacatccgccagtgtcggaaa
cacccgagcatgttcactgaaccgcagctgaagaccatcttcagcaacatcgaggatatt
tacaagttccagaggcagttcctcaaagacctggagaagaaatacaacaaggaggagccc
catctgagcgagataggagaatgtttcctcctccagggagaaggtttctccatctactct
gaatactgtaacacccaccctgctgcgtccggagagctgcaccgcctcatgaagctgggc
cgctacaagcacttcttcgaggcgtgccgtctcctccagcagatgatcgacatttccatc
tctggcttccttctcactcccgtccagaagatctgcaagtaccccctgcagcttggagag
ctgctcaaatacacccccaaagaccacagcgaccacagcggagtgagcgacgcgtacgag
gcgatgaagaacgtggcgagcctaatcaacgagagcaagaggaggctggagagcgtggac
gccctcgctcactggcaggtggccatccttcactgggagggagctgacatcctggagcgt
agctcggagctgatccactccggggagctgacccgcacggtgcggcagggcaagacgcag
cagcgcagcttcttcctgttcgaccaccagctggtgttctgcaagaaggacgtgctgagg
cgcgacctgctgcactaccgcggccggctggacatggaccagacggaggtggtggagctg
cccgacggcaaagacccggacctgggcctgaacctgcggaacgccctgcgcctccgccac
gctgccaccctggagagcctgggcgtgctgtgctgcaggaagacccaggacaagcagagg
tggctgcaggccttcgccagggagagacacagggtcaaggaggaccaggagatgggtata
aagattagcgaagcgcagaggaaacaggcgatcttcaatgcaagaaaatccaaaaaaggg
aaaatgaagacaattggctactctggttctatcccgccccaccaacaatccctgcacccg
ctccatcaacgacatgttaccgtgccaaccagtgtgcctcaacaacaggtgttcacattg
gctgagcccaagcggaagccatcacacctgtggtacaccttcacccgcaacgcctttttc
aagaaataa
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