Osmerus eperlanus (European smelt): 134035034
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Entry
134035034 CDS
T10927
Symbol
rttn
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
oep Osmerus eperlanus (European smelt)
Brite
Cilium and associated proteins [BR:
oep03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134035034 (rttn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134035034
NCBI-ProteinID:
XP_062335801
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Position
15:13166255..13192264
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AA seq
2237 aa
AA seq
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MEIRSLIRKIGHSLLEIRVRALKSIICKLDHFLLSISDVVQERMLFVLLLEWFNFPEVPM
QEEVLQLLKTLSKHETGAQMLRDVGAVEFFTQLSPNVEPELRNVVDGIVDQLFHLPDLFT
AGPTVSSQEQAVMTSTFPPEQSAPTVGYFQSGKPNQADIPPQRKAVSNTVRCLKFSTFPW
LTLTTTDRHILSSNESSLRSNNHNLVRTTCELLRDVIMQDFPAEIFLQRPSIVQNLLSLL
RLGEGEAGYLRLQAVSCLRQLSVALRTRLRFHRDPSFYSAKQDPVSQNSSMSYSQDVRGT
QVQRSLASSPGAECSPRPSVVGRTGQRASGDGQDGDAASSSGSSRGAGGGSQALRQSPQS
PAEAAQLELPDLGAEDVLELQLQQLSLPQFAVTTMEHAIPLLRTDGVRVFQRVLELLCET
LVLLGDSVCELVWEDHSLVGMDLAKKLQSSVAEMGEILRYHQSCPADSPPGCLLHHRMAY
VGTAVFSIRLLQTVLPLEKASENLPESTAAVLLPLCLDRPFSLVFPSMHEAAVAYLEQVN
SDGHALYRRVTRAALWMESTCAFLKETQAEGEKNWLELLELADQAVEGLPFHQHLPIIKE
CINICSNLWKIDQASPLLKTESQKVFLKLLSHPLLPVKTETYSCTLTVVKDCLWVQNKSK
PGSSVCAGVRFLLHARVLYEISAFGLQDPAEKVNAAAKDILLFLLKGRLMMTASTWDRFN
EALYPVIPILQSYADTEDALGNCVLLISEVSKLGRDDLVPNTTRLRAALRLLFTKQQTVR
VKAVEQLVSYLASDEALALATLPSIFCLSRTLDITLDSSNRSFLKAESVEKLFAILTSDS
VDSTLRRSAAEQLAVVLQDTAMHPVLKSLGVADTVTSFITESVSGDVKGPGSLLEPCVCI
LRKLVFADRSLRHRLAEQNGLLLALLRATLLIKENGGDVRELAALMCLLLFDEIATVDTW
CDKAGTSSLSPFSLPVSVLRRYNLPFQSASHHAVSPHCSVLPPSADLLSLPPARHALQLA
WNSAWHSGIDNLLEERSSMADFHSDLILSEAQVLLLRATHLPSGLQDCIQAIVMAAGHRS
VTSAVSRLRLYRLTDRLALMHAHTPGFRNTLSSLTWQPAIARFLQVQPACMEDERLLVDI
VAFLNGHFEQPCPESEREDQDLRWIMELLLNQETNSLLAPLLGTQPHTHAQTQAQTQAQT
QAQTQAQTQGESEEVRNLLHQRLQRELTSFFNTLLRRLQHTTDRLCLTMAGPFESQLAMR
LLQSLRVSDAPRFYGLPSLERTLLGMVHLTARPGWSSQCHSLEPHALRLKYLSGLLEVLS
SFYVEWGGNSMSFMGKGVTKNAIICLLHLSHEMIAEGKDKDFISQWSLGHEAGSEEPSGS
QLGLAWLIPLWVDRDPEVRFASLGVGSSLSCLPSGCHALCASCHNVSGGLWGTLLNILLD
RQESSMVRREAAFILQNLLVMPMPANADEAKDSPWQNPCVHDEASGVSLVGLPALQALLY
HCQFFQHLSLMASACYRGRYTFPLQPPPPAPAPSPQDGHEAEDSLNLWRSCAPAAQDQSR
ASGSLSTSSTLLLPGGSRPHSPAATYSSGTAQDTPASRLMAQGQSDTDTSNSVMSQDSRL
GDPSAEACAIVTPDLLSALCSLLHNLLAVLPDFTLGALQHSQLLQSLASLVDSRAIERCV
SELRSSHTPPGDREDIRSQVLTLLQYLSSYCKLLQTCVVISKELIGQADFLKPLLTNVFA
VLTLDNKDLDVPVQAAVSVCWTDLLTLLATLVRRDGFKAHPSVCAVLGPSWLAFTDTLSV
CVDHSELPLHVAALDFLCVLLSEEAHRRSLKVTPMTPHPVTPISEALNGAPGGQMCELLL
QSFEKRSFQDPVKKLSARALAALLACSPTAQDHAAKAGLMDSCVEQLKQSQAQLQLESVR
PGRAVPRRKEESYMREVKMAAEILRNCLYHNDECKAVATDARLAAVLQALWPWLLGDDSA
MEAALELLCVYTASCTAACSALCSTGGVGVAPGPRGAGSLMHLVMRLASGLASDLSLVQR
LAFSLLANLAVSRDCRGILHKSHFLQGFLAVPVPKAGGGKAGGLLGLWLRLLVCLTQGED
GQLNVLRLNGALELLADVAGQHRHGNRPLAADAILILHNVCFSSANKPRLLANDKAMKVL
VSCLDSKDTDIQSMGASALWALLHNNQKAKTTLKCPSVRFLVDEAYAATKKDAEKKQNPI
NAYLLKCLESLSQLLNT
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atggagatacgatctctcattaggaaaattggtcattctttgttggagatcagagttcgt
gctctgaagagcatcatatgtaaactggaccatttcctattgtccatttctgatgtggtc
caagagagaatgctattcgtccttctcctggaatggtttaactttcctgaggtgccaatg
caagaggaggtccttcaactgctgaaaacactatctaagcatgagacaggagcccagatg
ctgagagatgttggggcagtggagtttttcacacaactctcccccaacgtggagcccgag
ttaaggaatgttgtcgatggcatcgtcgaccagctgtttcatctgcctgatctgttcact
gcgggtccgactgtctcctcccaagaacaggctgtgatgacctctacattccccccagag
cagagtgctccaacagttggttacttccagagcggcaagccaaaccaggcagacattcca
ccacagagaaaagcagtgagtaacactgtgagatgcttaaagttttctacattcccttgg
ctgactttgaccactacagaccgacacatactgtcatccaatgagagctctttgaggagt
aacaaccacaacctggtccgtaccacatgcgagctcctgcgtgatgtcatcatgcaggac
ttcccagctgagatcttcctccagagacccagcatagtccagaaccttctgtccctctta
aggctgggtgagggggaggcaggctacttacgcctgcaggccgtgtcctgcctgcgacag
ctcagtgtggctcttagaaccagactgcgcttccatcgagaccccagcttctactcggca
aagcaagatccagtgtcccagaactcgtccatgtcctactcccaggacgtccgtgggacc
caggtccagcgctccttggcctcctctcctggggcggagtgctcacccaggccctcggtc
gtgggccgcacaggccagagggccagcggggacggccaggacggcgacgccgcctccagc
agcggcagctctcgtggagctggaggaggctcccaggccttgaggcagagcccccagtct
cctgcggaagctgcccagctggagctgcctgacctgggggcagaggacgtgttggagctg
cagctgcagcagctcagcttgccccagttcgcagtcaccaccatggagcacgccataccc
ctgctcaggacagatggtgtgcgtgtgttccagcgtgtgttggagcttttgtgtgagacc
ttagtgctgctgggggacagtgtgtgtgagctggtctgggaagaccacagcctggtggga
atggatctggcaaagaagctgcagagcagtgttgccgagatgggagagatcctgagatat
caccagagctgtccagccgatagtcctcccggctgcctgctccaccaccggatggcctac
gtaggcacggccgtgttcagcatcaggctcctgcagaccgtcctgcctctggagaaagcc
agtgagaacctcccagagagcactgcggccgtcctcctccctctctgcctggacaggccc
ttcagcctggtgtttcccagcatgcacgaggcggccgtggcgtacctggagcaggtgaat
tcggacggccacgccctctaccggagggtgacccgtgcggctctctggatggagtccacc
tgtgccttcctcaaagagacgcaggctgagggggagaagaactggctggagctcctggag
ctggcagaccaggccgtagaggggcttccatttcaccagcacctgcccatcatcaaggag
tgcataaacatctgctccaacctgtggaagattgaccaggccagcccgttactaaaaaca
gagagtcagaaggtgtttctcaagctcctgtcccacccccttctcccggtgaagactgag
acctactcctgcaccctgactgtggtcaaggattgtctgtgggttcagaataagtccaag
cctgggtcatcagtctgcgctggggtccgcttcctgcttcatgcaagagtcctctatgag
atcagtgcctttggcctccaggacccagcggagaaggtgaatgcggctgccaaggatatc
ctgctgttcctgctgaaagggagattgatgatgacagcctccacctgggatagattcaac
gaggcactttacccagtcatccctatactgcagagttatgcagacacagaggatgcgctg
ggaaactgtgtgctgctgataagtgaagtgtcaaagctggggagagacgacctggtgcca
aacaccaccaggttgagagcagcgctccggctcctcttcactaaacagcagacggtgaga
gtgaaagcggtggagcagctggtctcctacctggccagtgatgaggccctggccctggcc
acactaccctccatcttctgcctcagcagaaccctggacatcaccctggacagcagcaac
aggtctttccttaaggccgagtccgtggagaagctgtttgccatcttgacctctgacagc
gtggactccaccctgcgcaggtcagctgccgagcagctggccgtcgtcctgcaagacaca
gccatgcaccctgtgctgaagagtctaggagtggccgacacagtcacgtccttcatcaca
gagagcgtcagcggggacgtgaagggcccaggcagcctgctggagccctgtgtgtgtatc
ctgaggaagctggtgtttgcagaccgctccctgaggcacaggctggcagagcagaacggt
ctgctcctcgctctgctgagggctacactgctcattaaggagaatggaggagatgtgcgc
gagttggctgctttaatgtgcttgctgctctttgatgagatagccacggtagacacatgg
tgtgacaaagcgggcacgtcgtctctctcgcccttctctctccctgtgtcagtactacgc
aggtacaatctcccatttcaatctgcctcccatcatgcggtcagcccccactgctcagtc
ctgcccccctctgctgacctgctgtccctccccccagcccgacacgccctgcagctggcc
tggaactctgcatggcactctgggatagacaacctcctggaggaacgcagcagcatggcc
gacttccacagtgacctcatcctatcagaggcgcaggtactgttgctccgggcaacgcac
ctccccagcggcctgcaagactgcatccaggccatcgtcatggcggcgggacacaggtct
gtgacctctgctgtgtccaggctccgcctctaccggcttactgataggctggccctcatg
cacgcccacacaccgggcttccggaacacactgagttcactcacctggcagccggccatc
gcaaggtttctgcaggtgcagccagcatgcatggaggacgagaggttgctggtggacatt
gtagcgtttctgaacggccacttcgagcagccttgtcctgagtctgagagggaggaccag
gatctgcgctggatcatggagctactcctgaaccaggaaacaaactccctgctggcccct
ctgctgggcacgcagccccacacacacgctcagacgcaggctcagacgcaggctcagaca
caggctcagacgcaggctcagacgcagggggagtctgaggaggtgaggaacctgcttcac
cagagactccagagagaactcacctccttctttaacacactgctgcgccgcctccaacac
accaccgacaggctgtgtctgactatggcaggcccgtttgagagccagttggccatgcgt
ttgctccagagcctgcgcgtgtcggacgccccacgcttctatgggctgcccagcctggag
aggactctgctgggcatggtccacctgacggcccggcctggctggagctcccagtgccac
tcactggaaccccacgcgctccgtctcaagtacctcagcggcctgctagaggtcctctcc
tccttctacgtggagtgggggggcaactccatgtccttcatggggaaaggagtcaccaag
aatgcaatcatctgcctgctgcatctgtcccatgagatgatcgcagagggcaaggacaag
gacttcatttcccagtggtctttggggcatgaggcgggttctgaggagcccagtgggtct
cagttgggtctggcttggctcattcctttgtgggtagaccgagacccagaggtgaggttt
gccagtctgggggtgggctcctccctgtcctgtctacctagtgggtgccatgctctgtgt
gccagctgccacaacgtcagtgggggcctgtggggtaccctgctcaacatcctgctggac
cgacaggagagcagcatggtccgcagagaggcagcatttatcctgcaaaatctgttggtg
atgcccatgcctgccaacgcagacgaggccaaagactccccctggcagaacccgtgtgtt
catgacgaggcatccggggtgtccttggtgggcctgcctgcccttcaagccttgctctac
cactgccagttcttccagcacctctcccttatggcctccgcgtgctaccgtggacgctac
accttccccctgcagccccccccccctgcccccgcccctagcccacaggacgggcacgag
gcggaggactctctgaacctgtggaggtcctgtgctcctgctgcccaagaccaaagcagg
gcctctggctccctgtccacctccagcactctgctcctacctggggggtccagacctcac
tcccctgcagccacctactcctctgggactgcccaggacacacctgccagcagacttatg
gctcaaggccagagtgacacagataccagcaactctgtcatgtcccaggattcccggcta
ggcgacccctcagccgaggcctgtgccatcgtgacccctgacctcctgtcagcactgtgc
agcctcctacacaacctgctggccgtccttccagacttcaccctcggagcgctgcaacac
agccagctcctccaatcgctggccagtctggtggactcgagggccatagagcgctgtgtg
tctgagctgaggagctcccacaccccccctggagacagggaggacatcaggagtcaggtt
ctcaccctgctccagtacctgtccagctactgcaagctgctgcagacgtgtgtcgtgatc
agcaaggagctgattggtcaggctgacttcctcaaaccgctgctgaccaatgtctttgct
gtcctcacgctcgataacaaagacttggacgtgcctgtccaggctgcggtgtctgtgtgc
tggacagacctgttgacgctcctggctacgctggttaggagggacggcttcaaggctcat
ccatctgtctgcgctgtgctgggaccaagctggctagcattcacagacacgttatctgtg
tgtgtggatcactcggagctccctctccacgtggcggcgctcgacttcctgtgtgtgctg
ctctctgaggaggctcacagacgctccctaaaggtcacccccatgaccccgcaccctgtg
acgcccatctcggaggccctgaacggcgcccccggtggccagatgtgtgaacttctccta
cagagctttgagaagaggtccttccaggacccggtgaagaagctgagtgccagagccctg
gcagccctgctggcctgcagccccacagctcaggaccacgcagctaaggccggcctgatg
gacagctgtgtggagcagctgaagcagagccaggcccagctgcagctggagtctgtgagg
ccgggcagagcagttcccaggaggaaggaggagagctacatgagggaggttaagatggct
gccgaaatcctcaggaattgtctttaccacaacgacgagtgcaaagctgtggctactgat
gctcgcctcgccgccgtgctgcaagctctctggccctggctcctgggggacgactctgcc
atggaggcagcgctggaactgctgtgtgtttacaccgccagctgcactgcagcatgcagt
gctctgtgcagtactggtggtgtgggtgtggctcctggccctagaggagctggctccctc
atgcacttggtgatgaggctggcctcagggctggcctctgatctcagcctggtccagagg
ctggccttctccttgctggccaacctggctgtgtctcgagactgcaggggcattctgcac
aagagtcatttcctgcagggcttcctggctgttccagtccccaaggcaggcggggggaag
gcggggggtctgctggggctgtggctgcgcctgctggtgtgcctgacgcagggcgaggac
ggccagctgaacgtcctcaggctcaacggagctctggaactgctggccgacgtcgccggg
cagcatcgccacggcaacaggccgctggcggccgacgccatcctcatcctccacaacgtc
tgtttcagctcggccaacaagccccgcctcctcgccaacgacaaggcgatgaaagtgttg
gtttcctgcctggacagtaaagacacagatatccagtccatgggggcctcagccctgtgg
gccctcctccacaacaaccagaaagccaaaaccactttgaagtgtccttcagtcagattc
ctggtcgatgaggcctacgctgccactaagaaagatgcagagaaaaagcaaaaccctata
aatgcctacttgctgaagtgccttgaaagcttgtcccagttgttgaatacctga
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