Osmerus eperlanus (European smelt): 134035073
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Entry
134035073 CDS
T10927
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04217
Necroptosis
oep04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134035073
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134035073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134035073
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
134035073
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
134035073
Multi subunit type E3
LUBAC complex
134035073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
UBA
Zn_ribbon_RanBP
zf-B_box
ANCHR-like_BBOX
UBA_7
Motif
Other DBs
NCBI-GeneID:
134035073
NCBI-ProteinID:
XP_062335867
LinkDB
All DBs
Position
15:complement(9222238..9230490)
Genome browser
AA seq
1105 aa
AA seq
DB search
MSSSVREFEDVRRRAESRLSISGLAQDVKADVQTMANVPLPLSEKYSHIKAKTMVMENAT
RASRQENLESLSKLFKALSILEKYGCNLTSPCRPKFWRSVKHNNPVFRTTVDAAQGGRAV
LYLYGYTNQQPDGLSFPEDVTDPDVEKVAAVTVEVMTLRLELDMMIKGAHPHPEAFIEII
PSLSQEDEVVSDAVVILPGEEGGERQKDHLHPTAPLKSTTHTAGECNLCGGVPTLLCPSC
ASTPFCDSCDHLYHRHPSRANHKRERIQDAMKDTCSICGTAPVSTHCSTCIQKLCLNCDR
LFHSHPDRGDHDRTMVSTVKPQGAAASPSFSSWECGHCTTVNPVQAVLCGTCERPRLANA
ASSGEEDLLQSPSNTEWQCKSCTVMNQGTSVLCEVCERPRLATRPPVTPVAFPSLASGLP
GEGATEVRGPKWICQVCTYQNSKPSVGCEMCNSPCKDPAVAKSLLSPKKDLSPPRLKPLP
APRDNDDLKRQETMREQGLALVSQIREGEKRGVTPEEVYASLRVSGGSSVNPCDWLQSEL
PHLLDEICAMAASVQQNYKTEHPGMQDNTEKDDGGIPGTLGCGAPGAGIQLSRAEAKQAW
LAAGGDTEKAVRQLLRDRQAKIKELRSMGFREVSQCEEALRQSGGEVRGALSLLQRPLLE
PFHQRIWTNQPEALLDPKDPDKQKLCRRLLALYDLPSWGRCELALSLLQEPDAQYSLEDV
VQAVRESQDRDFLRRLLNKTCPCCYDVFPHSKMQSLTSCQCAVCHHCFKQHFTVAIRDKH
IRDMVCPICQEPDINNPQHLDSYFSTLDIQLKGCLERDVYDLYHKKLTEHTLMMDPKFLW
CCHCTFGFIFDGELKVTCPGCHKSFCAQCKKPWEVQHKDLSCEQFQRWKKENDPEYQKQG
LTGFLRDNGITCPQCKFQYVLSRGGCMHFTCVQCAHQFCSGCNNPYYTTKCKTGECKLAG
LHAHHPRDCLSYLRDWDPERLQTLLQRNVVEFNTDPPNGTQTDECGVMEQKDEGGQQTDS
HCGIKTKQGHAGLCEKHYKEYLVSLINGHSLDPAVLYDVKEVEVACARYEVDHQRVEAEE
DQACHARLLKKLMEVPLGENVPRKK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcagtccgcgagtttgaggatgtgcgaaggagagcggagtctcgcctgtcc
atctcaggattagcccaggacgtgaaggctgatgtccagaccatggccaacgttcccctg
cctctctccgagaagtacagccacatcaaagctaagaccatggtgatggagaatgccaca
cgggccagcagacaggagaatctagaatccctgagcaaactatttaaagctctgagtatc
ctagaaaagtatggctgcaacctgacaagcccctgcagacccaagttctggcgcagtgtc
aagcacaacaaccccgtttttaggaccactgtggacgctgcccagggcggacgagccgtc
ctgtatctctacggctacaccaatcagcagccggatggcctcagcttcccagaagatgtc
acagatccagatgtggagaaggtggcagccgtgacagttgaggtcatgaccctgcgcctg
gagctggatatgatgatcaagggtgcacatcctcatccagaggccttcatagagatcatc
ccatcacttagccaagaggacgaggtggtgtctgatgctgtagtcatcctccccggagag
gagggaggggagaggcagaaggaccacctgcacccaacggctcctctaaaatccaccaca
cacacagctggtgagtgtaacttatgtgggggtgttccaactctcctttgcccctcctgt
gcatctaccccattctgtgattcatgtgaccacctctaccaccgccacccctccagagcc
aatcacaagagagagagaatacaggatgccatgaaagacacctgttccatctgtggtacg
gcccccgtctccacccactgcagcacgtgcattcagaagctgtgcctgaactgtgacaga
ctgttccattctcacccggacaggggggaccacgaccgaacgatggtcagcacagtcaag
ccacaaggagctgctgccagcccttcattctcctcgtgggagtgtgggcactgcaccacg
gtcaacccagtgcaagccgtgctgtgcgggacctgcgagcgacctcgcctggccaacgct
gcctccagtggagaggaggacctgttgcagtcaccctccaacacagagtggcagtgcaag
agctgtacggtgatgaaccagggaaccagcgtgctgtgcgaggtgtgtgaacgcccccgc
ctggccacccggccccccgtcaccccggtggccttcccttcgctggcctcaggactcccg
ggagagggtgcaacagaggttcgtggtccaaagtggatatgccaagtctgcacttaccag
aattccaaaccttcggtggggtgcgagatgtgcaactcgccatgcaaagacccggccgtg
gccaagtccctcctgtctcccaaaaaggacctgagtccaccccggttgaagcccctcccc
gcgcccagggacaacgacgacctcaagagacaggagaccatgagggagcaggggctggct
cttgtcagtcaaatacgggagggggagaagaggggcgtcacccctgaagaagtgtacgcg
tctctccgcgtctccgggggcagcagcgtgaacccctgcgactggctgcagtcggagctc
ccccacctgctggatgagatctgcgccatggctgcttcggtccagcagaactacaaaacg
gagcatcctgggatgcaggataacaccgagaaggacgacggagggattcccgggacgctt
ggttgcggggctcctggggcggggatccagctgtccagagccgaggccaagcaggcgtgg
ttggcagcagggggcgacactgagaaagcagtacgacagctgctcagagacagacaggcc
aagatcaaggagctgcggtccatggggttccgcgaggtgtcccagtgtgaggaggccctg
aggcagagtgggggggaggtgcgaggggctctgtccctgctgcagcgccccctactggag
ccctttcaccagcgcatctggaccaaccagccagaggccctgctagaccccaaggacccg
gacaaacagaagctgtgcaggcgcctgctggcgttgtacgacctgcccagctgggggcgc
tgtgagctggccctgtccctgctgcaggagcccgacgcccagtactccctggaagacgtg
gtccaggccgtgagggagtcccaggaccgagacttcctgcgcaggctgctcaacaagacg
tgcccctgctgctacgacgtgttcccacacagcaagatgcagtcgctcacctcctgtcag
tgtgcggtgtgccaccactgtttcaagcagcacttcacggtggcaataagggacaagcac
atcagggacatggtgtgtcccatctgccaggagcccgacatcaacaatccccagcatctg
gacagttacttctccactctggacatccagctgaagggctgcctggagcgtgacgtgtat
gatctctatcacaagaagctgacggagcacacgctgatgatggaccccaagttcctgtgg
tgctgtcactgcacgtttggcttcatctttgacggagagctcaaagtcacctgtccaggc
tgccacaagagtttctgtgcccagtgcaaaaaaccttgggaggtccagcacaaggacctg
tcctgcgagcagttccaacggtggaagaaggagaacgacccagagtaccagaagcagggc
ctgactggcttcctgagagacaacggcatcacctgtcctcagtgcaagttccagtatgtc
ctgtccagaggaggctgcatgcacttcacctgtgtccagtgcgcacatcagttctgcagc
ggctgcaacaacccctactatactactaagtgtaagacaggcgagtgtaaactcgcgggg
ctccacgctcaccacccacgtgactgtctgtcctacctccgagactgggatcccgagaga
cttcagaccctgctacagagaaacgtcgttgagtttaacactgatccccctaatggaacc
caaactgatgagtgtggagtgatggagcagaaggacgagggaggccagcagactgactcg
cactgcggcatcaagactaagcagggccatgccgggctgtgcgagaaacactacaaagag
tatctggtcagcctcatcaatggacactcgctcgaccccgccgtgctgtatgatgttaaa
gaggtggaggtggcctgcgcgaggtatgaagtggaccaccagcgagtggaggctgaggag
gaccaggcatgccatgctcgcttgctaaagaaactgatggaagtccctctcggagaaaat
gttccacggaagaaatga
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integrated database retrieval system
