Osmerus eperlanus (European smelt): 134035092
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Entry
134035092 CDS
T10927
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03271
Virion - Rotavirus
oep04145
Phagocytosis
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04514
Cell adhesion molecule (CAM) interaction
oep04517
IgSF CAM signaling
oep04518
Integrin signaling
oep04530
Tight junction
oep04810
Regulation of actin cytoskeleton
oep04820
Cytoskeleton in muscle cells
oep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
134035092 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134035092 (itgb1a)
04514 Cell adhesion molecule (CAM) interaction
134035092 (itgb1a)
04517 IgSF CAM signaling
134035092 (itgb1a)
04518 Integrin signaling
134035092 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134035092 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134035092 (itgb1a)
04530 Tight junction
134035092 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134035092 (itgb1a)
04810 Regulation of actin cytoskeleton
134035092 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134035092 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134035092 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134035092 (itgb1a)
04515 Cell adhesion molecules [BR:
oep04515
]
134035092 (itgb1a)
04090 CD molecules [BR:
oep04090
]
134035092 (itgb1a)
Membrane trafficking [BR:
oep04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
134035092 (itgb1a)
Exosome [BR:
oep04147
]
Exosomal proteins
Proteins found in most exosomes
134035092 (itgb1a)
Cell adhesion molecules [BR:
oep04515
]
Integrins
Integrin beta subunits
134035092 (itgb1a)
CD molecules [BR:
oep04090
]
Proteins
134035092 (itgb1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
134035092
NCBI-ProteinID:
XP_062335889
LinkDB
All DBs
Position
15:15496064..15515412
Genome browser
AA seq
805 aa
AA seq
DB search
MDLKILLLSTLLGFICDSSAQQEGNECIKGNARYCGECIQVGAKCGWCTDPDFLKQGEAT
STRCDEIESLKKRGCAAAKIEDPRGKQNILRNKAVTSRSKGGVKLKPEDITQIQPQKLSL
VLRSGEPQTFNVKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTRLMLEMSKITSDFK
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLNLTEDGKQFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGSTIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLEDNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVSMTYQAHCKNGVVNEGESGRKCSNISIG
DEVSFNIGVTSKGCPKQTDPSKSEVIKIKPLGFTEELEITLSFICECDCHKDRIPKSELC
HNGNGTYECGACKCNEGRIGRQCECSTNEVSSEDMDKNCRKDNGTDICSNNGDCVCGTCE
CKKRENPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRMCICDANWTGSACDCSLGTS
TCLASNKQICNGRGTCECGTCKCTDPKFQGPTCEICPTCPGVCAEHKECVQCKAFGTGEK
KDNCERDCSYFNLIKVKDRDMLPQPGQAFPLMHCKERDANDCWFYYTYAVNNNTEKEVHV
VETLDCPSGPPIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT
QENPIYKSPINKFQNPNYGRKAAVL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaaatacttctgctatccacgttgttgggatttatttgcgacagcagtgct
cagcaagaggggaacgagtgcatcaagggcaacgccaggtactgcggggagtgtatccag
gtcggagccaaatgtggatggtgtacagacccagactttctgaaacagggtgaggccacg
tcgacgcggtgcgatgagattgaatctctgaagaagaggggctgcgccgccgccaagatc
gaagacccccgcggcaagcagaatatcctccgaaacaaggccgtgaccagccgcagtaag
gggggagtgaagctgaagccggaagacatcacccagatccagccccagaagctcagcctc
gtcctcagatctggtgagccccagactttcaacgtgaagttcaaacgggccgaggattac
cccatcgacctttattacctcatggacctgtcctactccatgaaggacgatctggagaac
gtgaagaacctggggacccgcctgatgctggagatgtcaaagatcacctccgacttcaaa
ataggcttcggctcgtttgtggagaagacggtgatgccgtacatcagcacaaccccggcc
aagctgctgaacccgtgcaccggggaccagaactgcaccagccctttcagctacaagaac
gtgctcaacctcacagaggacggcaagcagttcaacaccctggtgggccaacagcagatc
tcaggcaacctggactctcctgaggggggcttcgacgccatcatgcaggtggccgtctgc
gggtccaccatcggttggaggaacgttactcgtctgctggttttctccacagacgccggc
tttcacttcgctggcgatggcaagctaggtggcatcgtcctgcccaacgatgggaaatgc
cacctggaggacaacatgtacaccatgagccactactatgactacccctcgatcgctcac
ctggttcagaagctgagtgacaacaacatacagaccatctttgctgtcactgaggagttc
cagcctgtgtacaaggagctgaagaacctcattcctaagtctgcagtgggaacactgtct
gctaactccagcaacgtcatcaacctgattatcgatgcgtacaactctctctcctctgag
gtgattctggagaacagcaagcttcccgagggcgtgagcatgacgtaccaggcccactgc
aagaacggcgtggtcaacgagggcgagagcggacggaaatgctccaacatctccatcggc
gacgaggtgtcgttcaacatcggcgtgacgtcgaagggctgtcccaagcagactgaccca
agcaagtctgaggtgatcaagatcaagccgctgggcttcactgaggagctggagatcact
ctgagcttcatctgcgagtgcgactgccacaaagaccgcatccccaagagcgagctctgc
cacaacggcaatggcacctacgagtgtggcgcctgcaagtgtaacgaggggcggatcggc
aggcagtgcgagtgcagcaccaacgaggtgtccagtgaggacatggacaagaactgccgc
aaggacaacggcacggacatctgcagcaacaacggagactgtgtgtgtggaacctgcgag
tgcaagaagagggagaaccctgaggagcgctacagcggaaagttctgcgagtgtgacaac
ttcaactgtgaccgctccaacaacaagctgtgtggaggccacgggcgctgtgagtgcagg
atgtgtatctgcgacgccaactggaccggcagcgcctgcgactgctccctgggcacctcc
acctgcctggcctccaacaagcagatctgtaacggccgaggcacctgcgagtgcggcacc
tgcaagtgtacagaccccaagttccagggccccacctgcgaaatctgccccacctgcccc
ggagtgtgtgcggaacacaaggagtgtgtccagtgcaaggcctttgggactggagagaag
aaggacaactgtgagagagactgtagctacttcaacctgatcaaggtgaaggaccgcgac
atgctgccccagccaggccaggccttccccctcatgcactgcaaggagagggacgccaac
gactgctggttctactacacatacgccgtcaacaacaacaccgagaaggaggtgcacgtg
gtggagacgctggactgtccctccggcccaccgatcatccccatcgtggcgggtgtggtg
gcgggcatcgttctgattggcttagccctgctgctcatctggaagctgctcatgatcatc
cacgacaggagggagttcgccaagtttgagaaggagaagatgaacgccaagtgggacacg
caagagaatcctatatacaagagtcctattaataagttccagaatccaaactatgggcgt
aaagctgcagttctataa
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integrated database retrieval system
