Osmerus eperlanus (European smelt): 134035188
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Entry
134035188 CDS
T10927
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134035188 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oep03032
]
134035188 (pola1)
Enzymes [BR:
oep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134035188 (pola1)
DNA replication proteins [BR:
oep03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
134035188 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
DUF4829
Motif
Other DBs
NCBI-GeneID:
134035188
NCBI-ProteinID:
XP_062336084
LinkDB
All DBs
Position
15:10665193..10698692
Genome browser
AA seq
1459 aa
AA seq
DB search
MAPVSNPEKDMDNPDGAEGDDCGLAMSRSRREKKEKVGRKSALEQLRKAKRGEKVKYEVE
DFSSVYEEVDEEQYCRMVRERQDDDWIIDDDGTGYVEDGREIFDEELADDIVEKSKKGKA
GAKGANSQKNVKKAAVTKPNSIKSLFMNSNVKKPAEKDVDLSKDDLLGDLLQDLHSEKAS
ILSPPPIVTLKKKKSLGSPINPFSVKPQNPKESPSGLGSKVKMCRLAPTRLAAKVPSRPP
PSTAAPVEKRGKMEAEEEEVDASLQFDEVDFDEPMEMGAEELSVKEETEPESMAQVKVEV
KAEPQDPVPLSSLTGGSWGQEEEGEAPAEVQVDPSSLPLVEGPEGELMFRFYWLDAFEDQ
YSQPGVVYLFGKVWIQSAKAYVSCCVAVKNIERTMYFLPREYKVNTKTGEVSDTPVGMMD
VYQEFNELSEKFKIMKFKSKKVERSYAFEIPDVPTQSEYLEVRYSAESPALPSDLKGATF
SHVFGTNTSSLEHFLLSRKIRGPCWLDVKTPQLNSQSVSWCKVEALAIRSDLVCVVKDLA
PPPLTIMSISLKTVQNPKTHHNEIVSLAALVHHNFHLDKAPPRPPFQTHFCVVSKPSDCI
FPYDFKEAIKKKNGKVEIAATERTLLGFFLAKMHKIDPDVLVGHDIFGFDLEVLLQRIAF
CKVPHWSKMGRLRRANMPKLGGRSGFAEKSATCGRLVCDVEISAKELIRCKSYHLTELAA
QVLKTERATISPENIKNLYSDSPHLLYLLELNWTDARLILQIMCELNVLPLALQITSIAG
NVLSRTLMGGRAERNEFLLLHAFHEKNYIVPDKPSFKKAQQDLIEGEEDGNAGKGKRRKK
AAYAGGLVLDPKVGFYDRFVLLLDFNSLYPSIIQEFNICFTTVTREAQSSRKKTEEEQEQ
IPEIPEQGLEMGILPREIRKLVERRKQVKGLMKQQDLNPDLYMQYDIRQKALKLTANSMY
GCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIMINTNSNTLEE
VYKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPQADGRYSTKQELKGL
DIVRRDWCDLAKECGNYVIGQILSDQSRDAIVENIQRHLVEVGERVASGAVELSQYEIHK
ALTKDPQDYPDKKSLPHVHVALWINTQEGRRVKAGDTVSYVICQDGSSLGPSQRAYALEQ
LQKQAGLSLDTQYYLAQQVHPVVGRICEPIEGIDGVLIATWLGLDPSQFRTQVQHQREEE
GEGFVGAAAQLTDEERFRDCERFTLACPRCRADNVYDNVFDGADVKAEPSLLRCCHVPCE
GRPISHPVNICNKLLLDIRRHVKKYYSGWLVCEDQACQNRTRRLPVSFSRHGPTCPACTK
ATLRPEYSEKALYNQLCFYRFIFDWDHALASGKGKSINAHDAAKDVYKKLKEVPDRALAA
SGYSDVDLAKLFQAFASLK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtgtcaaacccagaaaaggacatggacaacccggacggtgcagaaggtgac
gactgtggtctggcgatgtctcgctccagaagggaaaagaaagagaaggttgggaggaaa
tcggctctggagcagctcaggaaagccaagaggggggagaaggttaaatatgaggtggaa
gacttttcgagtgtgtatgaagaggtggacgaggagcagtactgtcggatggtgcgggag
agacaggatgatgactggatcattgacgatgatgggacaggttacgtggaggacgggagg
gaaatctttgatgaggaattggcggatgacatcgtggagaaaagcaaaaaaggtaaagct
ggagctaaaggagcaaactcccaaaagaatgtgaagaaggcagctgtcaccaaacccaac
agcatcaagagtctcttcatgaacagcaatgtcaagaagcctgcagagaaagatgttgac
ctgtccaaagatgacctactaggggaccttctgcaggacttgcattcggagaaagcatca
attctgtcaccaccgccgatcgtcacactgaagaaaaaaaagtcacttggttctcccata
aaccctttctctgtcaaacctcaaaacccaaaggagtcaccctcgggcttggggtcaaag
gttaagatgtgtcgtctggcccccactcgcttggcagccaaggtgccctcccgcccccca
ccctctactgctgcccccgtggagaagagaggaaagatggaggcggaggaagaggaggtg
gatgccagtctgcagtttgatgaggtagactttgatgagccaatggagatgggagcagag
gagctgtcggtcaaagaggagacggagcctgagtcgatggctcaggtcaaagttgaggtg
aaggcggagcctcaggacccggtcccactgtcaagcctgacgggggggtcgtggggtcaa
gaggaagagggcgaggccccagcggaggtgcaggtcgaccccagcagcctcccattggtc
gaggggccagagggagagctcatgttccgtttctattggctggatgccttcgaggaccaa
tacagccaaccaggcgtggtctacctgtttgggaaggtctggatccagtcagccaaggcc
tacgtcagctgctgcgtggccgtcaagaacatcgagaggactatgtacttcctgccccga
gaatataaggtgaacactaagacgggggaggtgtcggacactccggttgggatgatggac
gtgtaccaggagttcaacgagctctctgaaaaattcaaaatcatgaagttcaagtccaag
aaagtagagaggagctacgcttttgagattcctgacgtgcctacgcagagcgagtacctg
gaagtccgctactctgctgagtcaccagctctgccctccgacctgaagggggcgacgttc
tcccatgtgtttggtaccaacacctccagcctggagcactttctcctcagcaggaagatc
agaggaccctgctggctggatgtcaagaccccacagctgaacagccaatcagtgagctgg
tgcaaggtggaggcgctggccattaggagtgacctggtctgcgtggtcaaagatctggcc
ccgcccccactcaccatcatgtccatcagcctgaagactgtgcagaaccccaaaacccac
cacaacgagattgtgtccctggctgccctggtccaccataacttccacctggacaaggcc
cccccgcgccccccattccagacacacttctgtgtggtcagtaaacccagcgactgcatc
ttcccttacgacttcaaagaagccatcaagaagaagaacggtaaggtggagatcgccgcc
actgagaggactctgctgggtttcttcctggccaagatgcacaagattgacccggacgtg
ctggtgggtcacgacatctttggcttcgacctggaggttctgctccagaggatcgccttc
tgcaaggtcccccactggtccaagatgggccgtctgaggagggccaacatgcccaaactg
gggggccgcagtggcttcgctgagaagagcgccacctgtggccggctggtgtgcgacgtg
gagatctcagccaaggagctgattcgctgcaagagctaccacctgaccgagttggctgca
caggtcctgaagactgagagggccaccatctccccggagaacatcaagaacctctacagt
gactctcctcacctcctgtacctgctggagctaaactggacagacgctcgtctcatcctg
cagatcatgtgtgagctgaacgtgctgcctctggccctgcagatcaccagcatcgcaggc
aacgtcctgtcgcgtacgctgatgggggggcgtgcagagaggaacgagtttctgctgctg
cacgccttccacgagaagaactacatcgttcctgacaagccctcctttaagaaggcccag
caagacctgattgagggagaggaggatggaaacgcagggaaagggaagcgaaggaagaag
gcagcctacgctggtggtctggtgctggaccccaaagttggtttctatgacaggtttgtg
ttgctgctggacttcaacagtctgtacccgtccatcatccaggagttcaacatctgcttc
accacagtcacccgagaggcccagagctctcgcaagaagacagaggaggagcaggagcag
atcccagagatcccagagcagggcctggagatgggcatccttccccgggagatcaggaag
ctggtggagcgcaggaagcaggtgaagggcctgatgaagcaacaggacctcaaccctgac
ctctacatgcagtatgacatcagacagaaggctctgaagctaactgctaacagcatgtac
ggctgcctggggttcagctacagccgcttctatgccaaaccactggccgccctggttaca
cacaagggcagagagattctgatgcacaccaaagatatggtccagaagatgaacctggaa
gtgatctacggcgacactgactccatcatgatcaacaccaacagcaacactctggaggag
gtgtacaagctgggcaacaaggtgaaggcggaggtgaacaagctgtacaagctgctggag
atcgacatcgacggcgtgttcaagtccctgctgctgctgaagaagaagaagtatgccgcc
ctggtggtggagccacaggccgacgggcgctacagcaccaagcaggagctgaagggcctg
gacatcgtgcgcagggactggtgcgacctggccaaggagtgtggcaactacgtgatcggt
cagatcctgtcggaccagagccgtgacgccatcgtggagaacatccagcgtcacctggtg
gaggtgggggagagggtggccagcggggccgtggagctcagccagtacgagatccacaag
gccctgaccaaggacccccaggactacccagataagaagagtctccctcatgtccacgtt
gccctgtggatcaacacccaggaggggcggcgtgtcaaagctggagacaccgtctcctat
gtcatttgccaggacggctcgtccctggggcccagccagagggcctacgccctggagcag
ctccagaagcaggccggcctcagcctggacacacagtactacctggcccagcaggtgcac
cccgtggtgggccgcatctgcgagcccatcgagggcatcgacggggtcctcatcgccacc
tggctgggcctggacccatcccagttccggacccaggtgcagcaccagagggaggaggag
ggggagggctttgtgggcgcggccgcccagctgacagacgaggagcggttcagggactgt
gagaggttcaccctggcctgcccgcgttgccgtgctgacaacgtctacgacaacgtgttc
gacggcgcggatgtgaaagcagagcccagcctgctgcggtgctgccacgtgccctgtgag
gggcgccccatcagccaccccgtcaacatctgcaacaaactgctgctcgacatccggcga
cacgtcaagaagtactatagtggctggctggtgtgtgaggaccaggcctgtcagaaccgg
acccggaggcttcccgtctccttctcccgccacgggcccacctgccctgcctgtaccaaa
gctactctccgacccgagtactctgagaaggccctctacaaccagctgtgcttctacaga
ttcatcttcgactgggatcacgcgctcgccagtgggaaaggaaagtctatcaatgcccat
gatgcggcgaaggacgtttataagaagttaaaggaggttccagaccgcgccctggctgcc
agtggctactccgacgtcgacctggccaagctgttccaggccttcgcctcccttaagtaa
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