Osmerus eperlanus (European smelt): 134035216
Help
Entry
134035216 CDS
T10927
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134035216 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134035216 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oep00536
]
134035216 (shha)
Peptidases and inhibitors [BR:
oep01002
]
Cysteine peptidases
Family C46: hedgehog family
134035216 (shha)
Glycosaminoglycan binding proteins [BR:
oep00536
]
Heparan sulfate / Heparin
Morphogens
134035216 (shha)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hom_end_hint
Intein_splicing
Vint
VldE
MjaV
Motif
Other DBs
NCBI-GeneID:
134035216
NCBI-ProteinID:
XP_062336132
LinkDB
All DBs
Position
15:complement(8836488..8843586)
Genome browser
AA seq
416 aa
AA seq
DB search
MLLTKFVVGFICLSLVSSVMGCGPGRGYGRRRHPKKLLPLTYKQYIPNVAEKTLGASGRY
EGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGIKL
RVTEGWDEDGHHSMESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVHYESKAHIH
CSVKAENSVAAKSGGCFPGSASVTLQDGSRKSVKDLKVGDKVLAANTEGELVYTDFIMFI
DQDSTTRRMFYVIETKEATQKITLTAAHLLFVVSNSTTDLHTMSAVYASKVKPGQKLVVF
DDSHNQLKSVTVERIYMKEYEGSFAPVTVQGTVVVDQVLASCYAVIEDHNLAHWALAPVR
FSYWLSSLLFAKDYTEPNATVHKDGVHWYSKILYQLGTWLLDSHSIHPLGMSIISS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgacaaaattcgttgtgggtttcatctgcttgtccttggtgtcctctgtgatg
ggctgtggaccaggcagaggctacgggaggagaagacatccgaagaagcttttacctctg
acgtacaagcagtatatcccaaacgtcgcggagaagaccctaggggcaagtggcagatac
gaaggcaagatcacacggaactccgagcgatttaaagaactgactccaaattacaatacc
gacattatattcaaggatgaagagaacacaggtgcggacaggcttatgactcagagatgt
aaagacaagctgaactcgctggccatctctgtcatgaaccagtggcccgggataaagctg
cgcgtgacagagggttgggacgaggacggacaccattccatggagtcgctccactacgag
ggaagggcagtggatatcaccacgtctgacagagacaagagcaaatacggcacgctctcc
agacttgcggtggaagccggattcgactgggtccactacgagtccaaagcccatattcac
tgttccgtcaaagcagaaaactctgtagctgcgaaatcgggaggctgcttcccaggttct
gcatcagttacccttcaagatggaagtaggaagtctgttaaagatctcaaagttggcgac
aaagtgctggctgccaacaccgagggggagctcgtttacaccgatttcatcatgttcatt
gaccaagattcgacaaccagaagaatgttttacgtgatagagactaaagaagcgactcag
aaaattaccctcactgctgcgcatctcctctttgttgtcagcaactcaacgactgacctg
cacacgatgtcagcagtatatgccagcaaagtcaaacctgggcagaagttggtggtattt
gatgattcacataaccaactcaagtctgtgacagtggaacggatttacatgaaagagtac
gaagggtcatttgctccagttactgtacaaggaaccgtcgtggtggaccaagtgcttgcg
tcgtgttacgcagtaattgaagaccacaacttggcgcactgggccctcgcgccagttcgg
ttcagctactggctttcttctttgcttttcgctaaagactacaccgagcccaacgccacc
gtgcacaaggacggagtgcactggtattctaagattctatatcaattaggaacgtggctc
ttggacagtcactcgatccatccacttgggatgtcaataatctccagttga
DBGET
integrated database retrieval system
