Osmerus eperlanus (European smelt): 134035918
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Entry
134035918 CDS
T10927
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04514
Cell adhesion molecule (CAM) interaction
oep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134035918 (lrrc4ba)
04517 IgSF CAM signaling
134035918 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134035918 (lrrc4ba)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
NGL family
134035918 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_9
LRR_14
LRR_1
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
134035918
NCBI-ProteinID:
XP_062336463
LinkDB
All DBs
Position
2:complement(23910695..23939058)
Genome browser
AA seq
734 aa
AA seq
DB search
MRIATVTSLPCPSPLLLLAQLLLWLLLLNPEGMEAASPCPGHCTCSNQASRVICTRQNLD
QVPESISINTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTMVPTQAFEYLSKLRELWLRNNPIETLPGYAFNRVPSLRRLDLGELRKLSFI
SEAAFVGLLNLRYLNLGMCGLKDIPHLTALVRLEELELSGNRLEIIRPGSFQGLVSLRKL
WLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHLLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCMV
TNSAGNTTATAVLNVTAADVSVNYTYFTTVTVETSESTGEEDSALRAINATFIRIPAPTP
SGHLWQGGLPTTASSLAGGWSPASPRATRPTFTVSVTEPGYSGLDDVMKTTKIIIGCFVA
ITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGGGGRGGGGGGGLSGGSSVQ
QGGGGVGGGQSMRLHHPEIVNLPNLARAEHLNHYYKAHHFNNNIMGLGLGSGLGLNNNNN
PSPCSLGPSTPLSCSQGPPSAGGATPTAGSLPSPVPLPQTGLHSSLKGLMGKNPQIQPLL
FKNGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacggtgaccagccttccctgcccctcccccctcctcctattggctcag
ctgctcctctggctcctcctcctcaaccctgagggcatggaggcggcctcgccctgcccc
ggtcactgcacctgctccaaccaggccagcagggtcatctgcaccagacagaacctggac
caggtgcccgagagcatctccatcaacacacgatacctcaacctgcaggagaactccatc
caggtcatcaagtcggacaccttcaagcacctgcgacacctggagatcctgcagctgtcc
aagaaccacatccggcagatcgaggtgggggcgttcaatggcctccccaacctcaacacc
ctggagctgttcgacaaccgcctcaccatggtccccacgcaggccttcgagtacctcagc
aagctaagggagctatggctacggaacaaccccatcgagacgctgccgggctacgccttc
aaccgcgttccctcgctgcggcgcctggacctgggcgagctccggaagctcagcttcatc
tccgaggcggccttcgtggggctgctcaacctgcgctacctgaacctgggcatgtgcggg
ctgaaggacatccctcacctcaccgccctggtgcgcctggaggagctggagctgtcgggg
aaccgcctggagatcatccgccccggctccttccagggcctggtgtcgctgcgcaagctg
tggctcatgcactcgcaggtgtccgtcattgagcgcaacgcctttgacgacctgaagaac
ctggaggagctcaacctgtcccacaactccctgcactcgctgcctcatgacctgttcacc
ccgctgcacctcctggagagggtccacctcaaccacaacccctgggtgtgcaactgcgac
gtgctgtggctcagctggtggctgaaggagacggtgcccagcaacaccacctgctgcgcc
cgctgccacgccccgccgggcctgaaggggaagtacatcggcgagctggaccagagccac
ttcacctgctacgccccggtcatcgtggagccgcccaccgacctcaacgtgaccgagggc
atggcggctgagctgaagtgccgcacggggacgtccatgacgtcggtgaactggatcacg
cccaacggcaccctgatgacgcacggctcgtaccgggtccggatctccgtcctgcacgac
ggcacgctcaacttcaccaacgtcacgctgcgcgacacgggccagtacacctgcatggtg
accaactcggccggcaacaccacggccaccgctgtgctgaacgtcaccgccgccgacgtc
agcgtcaactacacctacttcaccaccgtcaccgtggagacctccgagtccacgggggag
gaggattcggcgctgagggccatcaacgccaccttcatccgcatccccgcccccaccccc
tccgggcacctgtggcaggggggcctccccaccaccgcctcctccctggcggggggctgg
tcgcccgcctccccccgggccaccaggcccaccttcaccgtgtccgtcaccgagccgggg
tactccggcctggacgacgtgatgaagaccaccaagatcatcatcggctgcttcgtggcc
atcaccttcatggcggcggtaatgctggtggtcttctacaagctgcgcaagcagcaccag
ctgcacaagcaccacgggcctgcccgcgccatcgagatcatcaacgtggaggacgagctg
gggggcggggggcgcggcggcgggggcggcgggggcctctcagggggctccagcgtgcag
caggggggcgggggggtgggaggggggcagagcatgaggctgcaccaccctgagatcgtc
aacctgcccaacctggcgcgggcggagcacctcaatcactactacaaggcccaccacttc
aacaataacatcatgggcctgggtctgggctctggcctgggcctcaacaacaacaacaac
ccctcgccctgctccctggggccgagcacgcccctctcctgctctcagggacccccctcc
gccggcggggccacgcccacggccggctccctgccctcccctgtccccctgccccagaca
ggtcttcacagctccctgaagggcctgatggggaagaaccctcagatccagccgctgctt
ttcaaaaacggctcaaaggagaacgtgcaagagactcagatctga
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