Osmerus eperlanus (European smelt): 134035983
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Entry
134035983 CDS
T10927
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134035983 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134035983 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134035983 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
oep03029
]
134035983 (rb1cc1)
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134035983 (rb1cc1)
Membrane trafficking [BR:
oep04131
]
Autophagy
Autophagosome formation proteins
ULK complex
134035983 (rb1cc1)
Mitochondrial biogenesis [BR:
oep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134035983 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
134035983
NCBI-ProteinID:
XP_062336605
LinkDB
All DBs
Position
16:complement(2867466..2879826)
Genome browser
AA seq
1607 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQVKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSVENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDTAYINYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRNSYRESIEKSSSSPGKDSDETEEDDKSTDS
VLCPSESQRSSNRPACVSAPGTTPPGPSEGQETNDMTDSSGLRAALQEEDAPERANPPSF
NVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLAECRDTIAKLDNQNMKAIKG
LEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIML
TNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELLERVR
VVDALSTVPQMYCLAVVEVVRRKIFIGHYRQWASALVKDGKRLYEAEKYKRETFGKLFRR
SFLRNRLFRGLDSWPPTSFCTRKPRRFDYELPDISLGDLQYLKTCCPTEVQPFLRVPNIC
DFEPLNQHVHMLHQLVQAAQSMDDMSQTITDLLSEQRASCSQSAQRSTAVTPRSESTPGP
ATSTSSKTPTSLSLQGLPCQPLPVPVPTIQEDLSPDSIDAQTFDFETIGHPNMDPVLQQG
SLDLDSLAESPESDFMSAVNEFVIEENLTSPQPVSDPTSPEMMVESLYSSVINAIDSKRI
QDTTTLERENSKMAALKLSIEKYRSAAEDSQSNLRSVKDDLYRFRGLVLKEQRDFSFALK
TMTMEVCGLVDNIRQRREDELREQHQSQLLSLQRGHEEQLLTLTQENQLNQNIVRDVQRA
VLELEGLLERKQKELAQLEGEKERWAQAETSLAERANDLEQKIGEQAAEIQTLVSSRDFL
AVQLERLDGEIERVQEKLREELLGAERARLRELEDRLRGEHQALLEDLTARNQEALEGLF
ADNRAKLGEVTQLHAAALGERDARLTELEGRAGDLEAELALKKAEAEDARVLCKEAERER
AGAVKAAVEAETLALGEELAGLNQQLQARNEEYEAGLAEVRALMRLEKDHCISELVDRQE
KESALLRDQLSVLERRARDAETEHGEKLEKLRRDLEQQTEALLRDKDEELRSLQEQERHT
MTVISDLQAENHQLSKRLEQDAARQYVEREEALKTASPDAFKDLQRQKEETEGRLLDQIR
RLENELQERQSSERAPGLALQAEAGAGAPLSLDSALQERLMQETASLHSQLELLERRKNE
EMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEKLRNVTQQQEKDKGLIETLSEDR
ASVMQEKKQLEEELNRLRNTALVSSAYFTPNPLTMESAGAAAGAEACLSEPFPDPDRLAS
VAAIRDEDKVDSAVEASMVTVHDNILMMSEEKQRILLLERTLHMKEEENKRLNQRLMSQS
MSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLTALDLKPAS
GTTRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtacgtgttccaggtcaacaacggcagcacgttgacatttgacactgagctt
gctgtccaaactgtgttggacctcaaacatgccatccaggtcaagtataaaatagcaacc
caacatcaagtcctggttgtgaatggaggggagtgcatggttgctgagaggcgggtctgc
agctacagtgctggcactgataccaaccccatattcctattcaacaaagagatgatcttg
tgtgatcgggcgccaacaattcccaagactactttctcagttgagaatgagatggagctg
aaggtggaagagtccctgatgatgccggcagtctttcacaccgttgcctcacgaacacaa
cttgctgtggaaatgtttgaagttgccaagaaactttgctccttttgtgaacgcctggtt
cacgatgaacacctccaacaccaaggttgggctgccatcatggctaacctggatgactgt
accctgtcttatcagaagctactctggaagtttgacacagcgtacattaattatcaacag
gactttgaggacatcaaattgaaactcactaaactggggacagcagtctcagtcatggct
aagattccgctgctcgagtgtttgacccggaacagctacagagaaagcattgagaagtct
agctcgagcccagggaaggattccgacgagacggaggaggacgacaagtccacagactct
gtcctctgcccctctgagtcccagaggagctccaaccgacctgcctgtgtgtctgctccc
gggacaacaccacctgggcccagcgaaggtcaggagaccaatgatatgacagacagcagc
gggctgagggcagccctgcaggaggaagatgctccggagagggccaaccctccctccttc
aacgtcaccttgctggactggatcaatgtacaagaccggcccaatgacgtcgaatcagtc
gtcaggaagtgctttgactctatcaataggcttgacccacggatcatacaacccttctta
gcagaatgtcgtgacacgattgccaaactggataatcagaacatgaaggctatcaagggc
ctagaggacaggctgtacgcgctagaccaaatgattgcgagctgtaaaaagttggtgaac
gaacaaaaggaacttgctcagggatttctggccaatcagaagcgggctgaaaaccttaag
gatacgtcggttcttcctgacttatgcctcagccacgccaaccagctgatgatcatgctg
accaaccaccggaagctactggacatcaaacagaagtgcaccactgccaaacaggagctt
gcgaacaacctacaagttcgtctcaaatggtgctgctacgtgatgctccacgcggaccag
gatggggagaagctccaggccctgctgaggctgctgacggagctcctggagagggtgcgg
gtggtggacgccctgagtaccgtgccccagatgtactgcctggctgtagtggaggtggtc
aggaggaaaatcttcataggccactacagacagtgggccagtgctctagtaaaagatggg
aagcgcctctatgaagcggaaaagtataaaagggaaacgttcgggaagctattcaggagg
tcctttctcagaaaccgcctgtttcgagggctggattcctggcctccaacgtcgttctgt
acacgaaagcccaggaggtttgactatgagcttccagacatctcccttggcgacctgcag
tatctcaagacctgttgtcccacagaagtgcagcccttccttagggttccaaacatttgt
gactttgagcctttgaaccagcatgtgcatatgcttcaccagctggtccaagctgcacag
agcatggacgacatgtctcagaccatcaccgacctgcttagcgaacaaagggcgtcgtgt
agccagagtgctcagagatccacagccgtgaccccgcggtctgaaagcacaccgggcccg
gccacctctacctcctccaagacccccacctccctcagtcttcagggactcccctgccag
cccctcccggttcccgtccccaccatccaggaggacctctccccggacagcattgacgcc
cagaccttcgactttgagaccatcggccaccctaacatggaccctgtccttcaacaaggc
tccctagacttggactccctggccgagagtccagaatccgacttcatgtcggccgtcaac
gagtttgtgatcgaggagaatctgacctccccccagcctgtcagcgaccccacaagcccc
gagatgatggtggagtccctgtattcgtcggtcatcaacgccatcgacagcaagcgcatc
caggacaccaccacgctggagagggagaattccaagatggctgccctgaagctgagcatc
gaaaagtaccgctcggccgccgaggactcccagtccaacctgaggagcgtgaaagacgac
ctgtaccgcttccggggcctggtgctgaaggagcagcgtgacttcagctttgccctgaag
accatgaccatggaggtctgtggcctggtggacaacatccgacagagacgcgaggacgag
ttgagggagcagcaccagagccagctcctgtctctccagagaggccacgaggagcagctc
ctcaccctgacccaggagaaccagctcaaccagaacatcgtcagggacgtgcagcgggcc
gtgctcgagctggagggcctgttggagcgcaagcagaaggagctggctcagctggagggg
gagaaggagcgctgggcccaggccgagacgagcctcgccgagagggcgaacgacctggag
cagaagatcggcgagcaggccgcggagatccagaccctcgtctcctccagggattttctg
gccgtccagctggaacgtctagacggggagatcgagcgtgtccaggagaagctccgcgag
gagctcctgggcgccgagcgggcccggctgcgggagcttgaagacaggctgagaggggag
caccaggccctgctggaggacctcactgcccggaaccaggaggcgctggagggcctgttc
gctgacaaccgggccaagctcggcgaggtgacccagctccacgcagccgccctcggagag
agggacgcccggctgacggagctggagggccgcgccggcgacctggaggccgagctggcc
ctcaagaaggctgaggcggaggacgcgagggtgctctgcaaggaggctgagcgggagcgg
gcgggggcggtgaaggccgccgtggaggcagagaccctggctctgggcgaggagctggcg
ggcctcaaccagcagctgcaggccaggaacgaggagtacgaggcgggcctggccgaggtg
agggccctgatgcgtctggagaaggaccactgcatctcagagctggtggaccgacaggag
aaggagagcgccctgctccgagaccagctgtccgtgctggagcgccgcgcccgggatgcc
gagactgagcacggggagaaacttgagaagctccgccgtgacctggagcaacagacggag
gctctgctccgagataaagatgaggagctgaggagcttgcaggagcaggagcgacacacg
atgactgttatcagcgacttgcaggccgagaaccaccagctctccaagagattagagcag
gacgcagcgcggcagtacgtggagagagaggaggccttgaagaccgcatcaccagatgcc
tttaaagacttacagcgtcaaaaggaggagacagaggggagactgttagatcaaattaga
cgacttgaaaacgagctgcaagaaagacaatcctcggagagggcgccggggctggccctg
caggcagaggccggggcaggggcccccctctccctggactcggcccttcaggagcgcctg
atgcaggagacggcctcgctgcacagccagctggagcttctggagaggaggaagaacgag
gagatgcagaacttgaagacctcgctcatagcagagcagcagacgaacttcaacactgtt
ctgacgcgagagaagctgaagaaggagcaaatcatcaacgagctcacggagaaactccga
aacgttacccagcaacaggagaaggacaaaggtctgattgagactctgtctgaggaccga
gctagcgtcatgcaggagaagaaacagcttgaggaagagctgaaccggctacgcaacacc
gccctggtctcctcggcctacttcacccctaaccccttaaccatggagtctgccggggcc
gcggccggggctgaggcctgcctgtcggagcccttccctgacccagacagactggcttct
gttgcagccatcagagatgaggacaaggtggattcagcagtggaggccagcatggtgacc
gtacatgataatatcctaatgatgtcagaagagaaacaacgaatactgttacttgaaagg
actttacatatgaaggaagaagaaaacaaacgcctcaatcagagactgatgtctcagagc
atgtcatctgtgtcatcacggcactcagagaagattgccatcagagatttccaggtgggc
gatttggtcctcatcatcttggatgagaggcacgacaactatgtgttgttcaccgtcggt
cccactctctacttccttcattcagagtctctcactgcactggacctcaaaccagcatca
gggacaacaaggcggccatgggttcttgggaaagtgatggagaaggaatattgtcaggca
aaaaaggctcagaacaggttcaaggttccgctgggcacaaagttctacagagtgaaagct
gtaccatggaacaagaaagtataa
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integrated database retrieval system
