Osmerus eperlanus (European smelt): 134036076
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Entry
134036076 CDS
T10927
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134036076 (lrrc8da)
Ion channels [BR:
oep04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
134036076 (lrrc8da)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_5
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
134036076
NCBI-ProteinID:
XP_062336806
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Position
16:complement(3870472..3875938)
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AA seq
852 aa
AA seq
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MMFTLTEVASLNDIQPTYRILKPWWDVFMDYLGVVMLMLAIFAMTMQITKDQVACLPCLE
RAEQTACSNSFTTQSPLESAPSAASRTTMVSAPLPTKDLPDSAVHEIHVTHTQTAMKAER
IIGQPEPTGVRTNLDYQQYIFVNQMCYHVALPWYSKYFPYLTLIHTIVLMVSSNFWFKYP
KTSSKIEHFVSILGRCFESPWTTKALSETACEDSEENKQRLTGTSSAPKQMSSEGKEGSN
DSPSTPMLAGVKFSADKPLTEIPSMTILDKKDGEQAKALFEKVRKFRAHVEDSDFIYKLY
VAQTVVKTFKFILILSYTSTFMASIDFQHVCTPEKEFKNLTGYSQFICTHNMAFMLKKLL
ISYMALIMIYGMVCLYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQY
DQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVSRNAQDQQELHLFMLSGLPNAV
FDLTDLEVLKLELIPEVRFSAKLSQMTSLQELHLCHCPAKVEQTAFGFLRDHLRCLYVKF
TDVAEIPAWVYLLRSLRELNLVGNLSSENNKMIGLESLRDLRHLKTLYLKSNLTKMPSNL
TELSPHLIKLVVHNDGTKLLVLNSLKKMTNLAELELHNCELERIPHAIFSLTNLQELDLK
SNSIRTIEEVISFQHLKRLTCLKLWHNKIITIPASIGQVKCLESLHLSHNKLETLPTALF
HLPKLRHLDISHNSITVIPPDVGLLQNLQHLAINSNKIEILPKQLFRCTKLKVLCLANNG
LSTMPETVGQLVQLTQLELRGNCLDRLPTQLGNCRLLRKNGLIVEDHLFDALPVEVKESM
SRETNVSFASGL
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttacactgacagaggtagcctcgttaaatgacatccagccaacctaccgcata
ctgaagccatggtgggatgtgttcatggactacctgggggtggtcatgctcatgttggct
atcttcgccatgacgatgcagatcacgaaggaccaggtggcttgcctgccttgcctggag
cgggcggagcagacggcatgttcaaattccttcaccacacaaagtccactggaaagtgca
ccatcggctgccagcaggaccacaatggtttctgccccactgcccacaaaagatctacca
gacagtgctgtccatgagattcacgtcactcacacgcaaactgccatgaaagctgagaga
ataattggacaacccgagccaacgggggtcagaactaatttagattatcaacagtacatt
tttgtcaaccaaatgtgttaccatgttgccttgccctggtactccaagtacttcccttac
ctcactcttatccataccattgtgcttatggtcagcagcaacttctggtttaagtaccca
aagacaagttcaaagatagagcactttgtgtccattttgggccggtgctttgaatctcct
tggactacaaaggctctgtctgaaacagcttgtgaggactctgaggagaataaacagaga
ctgacaggcacttcttcagcaccaaaacagatgtcatcagaaggtaaagaagggagtaat
gacagcccatctactcctatgcttgctggagtgaaattttcggcagataagcccctcact
gaaatcccaagcatgaccatcctggacaaaaaagatggagagcaggctaaagctcttttt
gaaaaagtgaggaaatttcgtgctcatgtggaggacagcgattttatctacaagctttat
gtagcccagacagttgtcaaaacgttcaagttcattttgatcttgtcctacacatcaacc
ttcatggcatctattgattttcagcatgtatgtacacctgaaaaagaatttaagaattta
accggatactctcagtttatttgcacacacaacatggcttttatgctaaaaaagcttctt
attagctacatggctctcataatgatctatgggatggtatgtttgtatactcttttttgg
ttgttcaggcgaccccttaaagagtactcatttgagaaggtcagagaggagagcagcttt
agtgacattcctgatgtcaagaatgactttgccttcctcttacacatggttgatcagtat
gaccagctgtattccaaacggtttggcgtattcctctctgaggtcagtgaaaataaactg
agagaaatcagtttgaatcatgaatggacttttgagaaactgagacaacttgtaagccga
aatgcccaagaccagcaggagcttcatcttttcatgctctctggtctccccaatgcagtg
tttgacctcaccgatctggaagtgcttaaactggaactgattccagaggtcaggttctca
gcaaagctctcacaaatgactagtttgcaggagctacatctctgccactgccctgccaaa
gtggagcagacagcattcggctttcttcgtgaccatctccgctgcctttatgtgaagttc
acagatgttgctgagattcctgcatgggtttatctattgagaagcttaagggagcttaac
ttagttgggaatttaagctctgaaaataacaaaatgattggacttgagtcccttagagat
ttaagacatctcaagacattgtacctgaagagcaacctcaccaaaatgccctcaaacctc
actgagctgtctcctcacctgattaaacttgtggtgcacaacgatggtacaaaacttttg
gttctaaacagccttaagaagatgacaaacctagctgagctggagctgcacaactgtgaa
ttggagaggatcccccatgctatttttagcttgacaaaccttcaagagctggacctcaaa
tccaacagtattcgcaccatcgaggaagtcatcagctttcagcacctcaaaagattgact
tgcctgaaactgtggcataacaaaatcataaccattccagcatccataggccaggtcaaa
tgtttggagtcattgcacctctcccataacaaactggagaccctccccacagcccttttc
catctccccaagctccggcacctggacatcagtcataactccatcacagtgatccctcca
gatgtaggtctgctgcagaatctccagcacctcgccatcaactcaaacaagatagagatc
cttcccaaacagctgttccggtgtacgaagctgaaggtcttgtgtctggcaaacaatggc
ctttccacaatgcctgagactgtaggccagctggtgcagctcacccagctggagctgaga
gggaattgtctagaccgcctgcccacacaactggggaattgtcgccttcttcgtaaaaac
ggcctcattgttgaggaccacctttttgacgctttgcctgtggaggtaaaagagagtatg
agtcgggaaaccaatgtgtcctttgctagtggcttatag
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