Osmerus eperlanus (European smelt): 134036087
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Entry
134036087 CDS
T10927
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134036087 (hfm1)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134036087 (hfm1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Meiosis-specific proteins
Others
134036087 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
134036087
NCBI-ProteinID:
XP_062336822
LinkDB
All DBs
Position
16:complement(3841626..3852731)
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AA seq
1489 aa
AA seq
DB search
MLDPEDCSLSLESLFFEGPVVHKVKPLCQEVRHWQLEPPPSNSQIPSTQDIQREAESLSY
SFSQKSKKFLPPLKRVEGSDKFTIRNTHFPNIDDGKEPGEEDRYSPWEVEAKSYRGSSET
PQDSCHVLETRSFPPLRRSLFKPPSGQVSNSEETDVSSDHRSQPRPREQTFLHHQVAMAT
ELQPVSQSAAVPRPLPGLGPPAAGGPPQPMQEKGTKKAHVLPMTPQPLHIQGSSGAGVLR
PVSEIPAKFRSVFKEFPFFNYVQSKALDDVLYTSKNFVACAPTGSGKTVLFELAITRLLM
ETSEPWRNVKAVYMAPIKALCSQRYEDWKQKFGPLGLSCKELTGDTEIDDFFEIQDAHII
MTTPEKWDSMTRKWRDNCLLQLVRLFLIDEVHVVKDKTRGATLEVVVSRMKTVHAYRISE
NPQADLSMRFVAVSATIPNIADIADWLCDSGGPATCLEMDESHRPVKLRKVVLGFPCSSN
QTEFKFDLSLNYKMANIIQTYSDHKPSLVFCSTRKGVQQSATVLAKDARFIMSIEHKQRL
TKYANSIQDSKLRDLVLVGVGYHHAGVDMSDRKCIEEAFTMGDLPVLFTTSTLAMGVNLP
AHLVVVKSTMHYIGGSCEEYSEADMLQMIGRAGRPQFDSSATAVIMTKSQTKDKYMQFMN
GAEIIESSLHGHLVEHLNAEIVLHTISDVHMALDWIRSTFLYIRALKNPKHYGFSSDLDR
RGIEAKLQELCLKNLNSLASIDLVTMDEDVNIKATEGGRLMARYCVAFDTMKEFSKVSGT
ETLPEMIELLARGKEFSDVQLRVNEKRTLNTLNKDKNRITIRYSMEGKIKNNEMKVNCLI
QAQLSSIPIQEFGLTQDTAKIFRNGVRISKCLAEFLNQRSKTGFSALLSALILAKCFRAK
LWENSPYVSKQLEKIGLTLSTALVNAGLTTFNKIEQTNARELELIVNRHPPFGNQIRESI
IGLPKYEASLEQLPRYSVATAEIVVTVNLKNREDLLSKRTAPDHHYVTLLIGDCDNNVVF
LQKLSDSMLLKSGSWSKKIEVAKASKGDEISVNLISSEYVGLDIQQKFSAFYSGAKRFGA
EPMEPPPPGMQRALTSHQRAQGSGPRAQPPAPQAGAAAQGRNATSICETEKGLSEPDPGK
RQCNHFCKNKDLCGHDCCKVGVPRVMKRPVNPGSSFSTYLRDLKNRSDALAETPVKRLKM
RTCGDSESVNMQRFSYKPKPTLPSVSRYHSAQSVESAEEFATTQELAYQESFDNEYGDYL
EDIYETMGVEKEAVPAIQTPALSQSVPVWSEPADHTENRGYAESPSTGSGNDSSFFSSLH
TPNVNFDLGDEWDDWDDFDEENLVHASEMPCTAKTLAVDRSKSIGYSTPLPPIQAQLKPR
FTMTSTPVRPVVIPEMSVTPPPVRPHHQASAPWNHHDKKAFSETTVNAPTLPFSKPSDIE
TVSSGGRFDFFSKKTDIIPNNKNVTGNTRTQVEDNREVEAFLGIFDGIF
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgttggaccctgaagactgcagcctgtccttagaaagccttttctttgaagggccagtt
gtgcacaaagtaaagccactttgtcaagaggtaaggcattggcagttggaaccccctccc
tccaactcccagattccatcgactcaggacattcagagagaggcagagagtttatcatac
agtttctctcagaagtctaagaaatttctcccaccactgaaaagagtagaaggcagtgac
aaattcaccatcagaaatacacattttccaaacattgatgatggcaaagagcctggggag
gaagacaggtatagcccctgggaggtcgaagctaagagttacagaggtagcagtgaaacc
ccacaggattcctgtcatgtgctggagacgagaagtttcccccctctaaggagaagtttg
ttcaaacccccaagcgggcaggtatcgaacagcgaagaaacagacgtgagcagcgaccac
agaagccagccaaggcccagagaacaaactttccttcaccaccaggttgccatggcgaca
gagcttcagccggtgagccagtcagctgctgtccctaggcccctcccaggtctgggcccg
cctgcagcgggaggtcccccacagccgatgcaggaaaaggggacaaagaaggctcatgtt
ctacccatgacaccccagcccctccacattcaaggtagttctggggctggagtgctccgt
ccagtgtctgaaatccctgcaaagttcagatctgttttcaaggagttcccttttttcaac
tatgtccagtctaaagccctggatgatgtcctttacacaagtaagaactttgtggcttgt
gccccaactggctctggtaaaacagtgctgtttgagctagccatcacccgattactgatg
gagacctcagagccctggagaaatgtcaaagctgtatacatggcccccatcaaagctttg
tgcagccagcggtatgaagattggaaacagaagtttggacctctggggcttagctgcaag
gagttgacaggagacacagaaatcgatgacttctttgagattcaggatgcccacatcatt
atgactacaccagaaaaatgggacagcatgaccaggaagtggagggataactgcctgttg
cagttggtccgactctttctgattgatgaggtccatgtggtgaaggacaagactcgtgga
gccacactggaggtggtggtgagtaggatgaaaacagtccacgcctacaggatctctgag
aacccccaggcagacctctcgatgaggttcgtggccgtctctgccaccattcccaacatc
gcagacatagctgactggctctgtgactctggaggccctgctacctgtctggagatggac
gagagccaccggccggtcaaactgaggaaggtggtgctgggctttccctgcagcagcaac
cagacagagttcaagtttgacctgtcgctcaactacaagatggccaacatcattcagacc
tactcagaccataagccttctcttgtgttttgctccaccaggaagggagttcagcagtcg
gccactgtcctggccaaggatgccagattcatcatgagcatcgagcataagcagaggttg
acaaagtatgcaaactccatccaagattctaaactcagagatctggtgctggtgggcgtt
ggttaccaccatgccggagttgatatgtcagacaggaagtgcattgaagaggccttcacc
atgggagacctgcctgtactgttcaccaccagcacacttgctatgggcgtgaacttgccc
gcccacttggtggtggtcaagtctaccatgcattacatcgggggctcctgcgaggagtac
agcgaggccgacatgctgcagatgattggtcgagccggccggccgcagtttgattcctcg
gcaactgcagtgatcatgaccaagtcccaaaccaaagacaagtacatgcagttcatgaat
ggggcagagatcatagagagcagcttgcatggtcacctggtggagcacctgaatgctgag
atcgtcctccacaccatctctgacgtccatatggccctggactggattcgctccaccttc
ctctacatccgagccctgaagaaccccaaacactacgggttttccagtgatctggacaga
cgtggaattgaagccaaattgcaagagctctgtttgaagaacctcaactcgctggcgtcc
atagacctggtcaccatggatgaagatgtcaacatcaaagctacagagggaggcaggctg
atggcgagatactgtgtagccttcgacaccatgaaggagttcagcaaagtgtctggaaca
gagaccttacctgagatgattgaactgctggcaaggggcaaagagttctctgatgtgcag
ctgagagttaatgagaagagaactctgaacactctaaacaaggacaagaacaggatcacc
atcaggtattccatggaaggaaaaatcaaaaacaacgaaatgaaagtgaactgcttgatt
caggctcagctgagctccatccctatccaggagtttgggctcacccaggatacagcaaaa
atcttcagaaatggagtcagaatcagcaaatgtttggcagagttcctaaaccagcgctcc
aagaccggcttctctgctcttctcagcgccctgatcctggccaagtgtttcagggctaag
ctgtgggagaactcaccctacgtttcaaagcaactggagaaaataggattgaccctctcg
actgccctggtgaatgctggcctcaccaccttcaacaagatcgagcaaaccaacgccaga
gaactggagctgattgtcaacagacatcctccatttggcaaccaaatcagagagtccatc
atcggtctccccaagtatgaagctagtttggagcagcttccgagatacagcgttgccact
gccgagatcgtggtgacggtcaacctgaagaaccgtgaggatcttctgtctaagaggaca
gctcccgaccaccactatgtcaccctgctgattggggactgtgacaacaacgtggtcttc
ctgcaaaaactctcagactcgatgctgttgaaatctggcagttggtccaagaagatagag
gtcgcaaaagcttcaaaaggagatgagatcagtgtgaatctgatcagctcagaatacgtg
ggactggacattcagcagaagttcagtgccttctattctggagcaaagaggttcggagct
gaacctatggagccccctccacctgggatgcagagagccctgaccagccatcagagagcc
cagggctcagggcccagagcccagcccccagctccacaggctggggcggctgcacagggg
aggaatgccacatccatatgtgagacagaaaagggcctctcagaaccagatcctggcaaa
aggcagtgcaaccacttttgcaaaaacaaggatctgtgtggccatgactgctgcaaagtt
ggagtgcccagggttatgaagaggcctgtgaaccctgggtcgagtttctccacctacctt
agagacttgaagaataggagcgatgcgctggctgagactcctgtcaagcgcctcaagatg
agaacgtgtggtgacagtgagtctgtgaatatgcagcggttctcatataaacccaagccg
accctacctagtgtcagcaggtaccacagtgctcagagtgtagaatcagcagaggagttt
gctacaactcaagaactggcatatcaggaaagctttgacaatgagtatggtgactaccta
gaagatatctatgagaccatgggtgtagagaaggaggcggttccagctatccaaacccct
gccctgtcacaaagtgtccctgtgtggagtgaaccagctgaccacactgagaacagaggt
tacgctgagagtcccagcactggttctggcaacgacagcagcttcttctcgtcactgcac
accccgaacgtgaactttgacctgggagatgaatgggatgactgggatgactttgacgag
gagaacttggtacatgctagtgagatgccctgcactgccaaaacactggcagtggaccgc
agcaagtcaataggctactcaacaccacttcctcccattcaagcacaactgaaaccacgc
ttcactatgactagtaccccagtaaggccagttgttattccagagatgtcagtaacccct
cctccagtcagaccacaccaccaggcatccgcaccgtggaatcaccatgacaagaaagcc
ttcagtgaaacaacagtaaatgcaccaactctgccgttttccaaaccgagtgacatagaa
acagtctcctcaggaggaaggtttgatttcttctccaagaagactgacattatccctaac
aataaaaatgtgactggaaataccaggactcaagtagaagacaacagagaagtagaggcc
ttccttggaatctttgatggaatcttttag
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integrated database retrieval system
