Osmerus eperlanus (European smelt): 134036135
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Entry
134036135 CDS
T10927
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b isoform X1
KO
K06485
integrin alpha 6
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04382
Cornified envelope formation
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04514
Cell adhesion molecule (CAM) interaction
oep04518
Integrin signaling
oep04810
Regulation of actin cytoskeleton
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134036135 (itga6b)
04514 Cell adhesion molecule (CAM) interaction
134036135 (itga6b)
04518 Integrin signaling
134036135 (itga6b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134036135 (itga6b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134036135 (itga6b)
04810 Regulation of actin cytoskeleton
134036135 (itga6b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134036135 (itga6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134036135 (itga6b)
04515 Cell adhesion molecules [BR:
oep04515
]
134036135 (itga6b)
04090 CD molecules [BR:
oep04090
]
134036135 (itga6b)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134036135 (itga6b)
Exosomal proteins of breast milk
134036135 (itga6b)
Cell adhesion molecules [BR:
oep04515
]
Integrins
Integrin alpha subunits
134036135 (itga6b)
CD molecules [BR:
oep04090
]
Proteins
134036135 (itga6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
134036135
NCBI-ProteinID:
XP_062336904
LinkDB
All DBs
Position
16:9273059..9286190
Genome browser
AA seq
1085 aa
AA seq
DB search
MELRRILYVYSLSFVFILEWSRLSAFNLDTVNVIQKTGDPGSLFGFSLAMHRQLKPVDKR
MLLVGSPKAKALKGQIAQVTGGLYNCDITSSSSCKRVEFDNTEDPTKESKENQWMGVTVN
SQGPGGKIVTCAHRYEIRRFVKTLQEARDITGRCYVMSQDLTFSSSEDNGNWRFCEGRGR
GHELYGYCQQGISAAFTKDYHYLIFGAPGVYNWKGMVRIEQKNTTLLEMGIYDDGPFEVG
GENSQSPDLVPVPSSSYLGFSLDSGKSLTKKGHLTIVAGAPRAHHSGSVLLLKKDSDEGN
MLVPEYFLQGEGLASSFGYDLTVVDLNGDGWEDIVVGAPQYFEKDGEVGGAVYAYVNKGG
VWDKIKPTRIDGPRDSMFGLAVENIGDLNQDGFQDIAVGAPYDNNGKGNVYIYHGTANGI
NTKPTQILAGQPNMKLFGYSLAGNMDLDLNSYPDLAVGSLSDSVLVYRARPVVNIEKLVT
IKPKELDLTKKNCGDKICLEVEACFSYTANPKTYNPGLVVEYSFTVEGERKKQGLPSRVT
FSTQSNTDPGYKSTGQLSLSVQGKKECIIQKLTLQDNIKDKLRGIPIDVSVEIQKSNRRR
RQSSLPQLPPILDSNTPITAEVNFLKEGCGSDNKCQSNLKMEYRFCSKEHNKDVFIPLAI
KDGVPVVSLSDPKDIALEITVTNKNGDDAYEAALIASFPPSLSYSASRSTGERQVSCVAN
TNGSQTDCDLGNPFKKDSEVTFYIILSTGGISLDVTELEIDLKLKTTSEQQKMEMVKAKA
KVEIELLLSITGQAQPSQVSFSGVVRGESDMKTESDIGSAIRFQFKVSNLGKPLKSFGTA
SLIIQWPKETTDGKWLLYLMKVDSSGLGQVNCSPQKEINHLKTVKEEPSTTIRKRRAIED
TNQEGSIALLTDQRKYATLSCGSGATCVELRCPLQDFDSNAHLTLHSRLWNSTFLEEFSK
LNYLDLLVKATLHIEGTAQNVVLKNSDTQVRLTVFPERRAAQLGGMPWWIILVAILLGLL
LLGLLVFLLWKCGFFKRSKYDHSVPSYNAVRIAKGERHVKPAKNKHGSLEKKPWMTNWKE
NHSYS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaggcggatactgtacgtctactctctgtcatttgtttttatcctggaatgg
agtcgattgtcagcattcaacctggacaccgtgaatgtcatccaaaagactggagacccc
gggagccttttcgggttttctctcgcaatgcacaggcagttgaagccggttgataaaaga
atgttgcttgttggatcaccgaaggccaaggccctaaagggtcaaatagcacaggtgact
ggagggctatacaactgtgacatcacatcctcttcctcctgcaagagggtggagtttgac
aatacagaggaccctactaaagaaagtaaggagaatcagtggatgggcgtgacagtgaac
agtcaaggaccagggggcaagattgtgacctgcgcccaccgatacgaaatccgtcgcttc
gtgaaaacgctccaggaggctcgtgacatcaccgggcgctgctacgtgatgagccaggac
ctgaccttttcctcatccgaggacaatgggaactggcgcttctgcgaggggcgtgggcgc
ggccatgagctgtacggctactgtcagcagggcatatctgccgctttcaccaaagactac
cactacctcatatttggggctcctggagtatacaactggaaaggtatggtgcgtattgag
cagaagaacaccactctattggagatgggtatctatgacgacggaccctttgaggtgggg
ggtgagaacagtcaaagtcccgaccttgtccctgtcccgtccagcagctacctgggtttc
tctctggactcagggaagagcctaaccaagaaaggtcacctgaccattgttgctggggcc
ccgagagcccatcacagtgggtcagtgttgttgctaaagaaagattcggatgagggcaac
atgctggtgcctgagtacttcctgcagggggaggggctagcgtcctcgtttggttacgat
ctcaccgtggtggacttgaacggagatggttgggaggacattgtggtgggagcccctcag
tactttgagaaggacggagaggtgggcggagccgtttatgcgtacgtcaacaagggagga
gtctgggataagataaagcctaccaggatagacgggcctcgggattccatgtttggattg
gctgttgaaaacattggagacttaaaccaagatggctttcaggacatagctgttggggct
ccctacgacaataacgggaaaggaaatgtttatatctaccatggcactgctaatgggatc
aacaccaagccaacacagattctggcaggacagccgaatatgaaactgtttggctactcc
ctggcagggaacatggacctggacttaaactcctacccagacctggctgttggttcactc
tccgactctgtgctggtctacagggctcgaccagtcgttaacatagaaaagcttgtcaca
atcaagccaaaggagcttgacctcactaagaagaactgtggtgacaaaatctgtctggag
gtggaggcttgcttctcctacacagccaaccccaagacctacaaccctggactagtggtg
gagtattcctttacagtggagggtgagcggaagaagcaaggtcttccttctagagtcacc
ttctccacacagtctaatactgaccctggttataagtccaccggacagctcagtctcagt
gtccagggcaagaaggagtgcatcattcagaaactcactctgcaggacaacatcaaggac
aagctgaggggaatcccgattgacgtttccgtggagatacagaagtccaatcggagacgg
aggcagagctccctccctcagctgccgcccatcctggactccaacactcccatcaccgct
gaggtgaatttcctgaaggaaggctgtggcagtgataataagtgtcagagtaacttaaag
atggagtaccgtttctgttctaaagaacacaacaaagatgtcttcattccactagctatt
aaggatggagttccagtggtctcccttagtgacccgaaggatatcgccctagagatcact
gtgaccaataagaatggagatgatgcctacgaggctgctctgattgcctccttccccccc
tccctgtcctactccgcctcccgctccactggtgagcgtcaggtgtcctgcgttgcaaat
acgaatggctctcagacggactgtgacctggggaacccattcaagaaagactctgaggtg
accttctacattatcctaagtacaggaggcatctctctcgatgtcacagagctagagatc
gacctgaaactgaaaacgacaagtgagcagcagaaaatggagatggtcaaagccaaggcc
aaggtggagattgagctgctgctgtctatcacagggcaggcccagccctcccaggtatcc
ttcagtggagtcgtgagaggtgaaagtgacatgaagacagagagtgacatcggcagcgcc
attaggttccagttcaaggtatccaacctagggaagcctttgaaatcttttggcacagca
tccctcatcatccaatggccaaaggagacgaccgatgggaagtggctcttgtacctgatg
aaggtggactcatcaggtctgggtcaagtcaactgctctccgcagaaagagatcaaccac
ctcaaaacagtcaaagaggagccaagcaccacgataaggaagaggcgtgccatagaggac
acaaaccaagagggatccatagcactgctgactgaccagaggaaatacgcaactctgtcg
tgcggcagcggtgcgacgtgtgtggagcttcgctgccccctgcaggactttgacagtaat
gcacacctcacgctccactctcgcctgtggaacagcaccttcctggaggagttttccaag
ctcaactatctggatctgctggtgaaggctactctccatattgaaggcacggcccagaac
gttgtcctgaaaaactccgatactcaggtgaggctgacggtgttcccagagcgccgtgcg
gcccagctgggaggcatgccatggtggatcatcctggtggccattctgctgggcctgctc
ctgctgggcctgctggtcttcctgctctggaagtgtggcttttttaagcgttccaaatat
gaccacagtgttcccagttacaatgccgtgcggatcgcgaagggggagaggcatgtaaaa
ccagcaaagaacaaacatggcagcctggagaagaagccctggatgaccaactggaaggag
aaccacagctactcctaa
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