Osmerus eperlanus (European smelt): 134036213
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Entry
134036213 CDS
T10927
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134036213 (ptbp2b)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134036213 (ptbp2b)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
134036213
NCBI-ProteinID:
XP_062337028
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All DBs
Position
16:15232273..15245177
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AA seq
537 aa
AA seq
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MDGDVAVGVKRGSDELNLYSSSPNSVTANGGDSKKLRVEERAESPPSRVLHIRKLPSEVS
ETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQFS
NHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDPGALDSLAPAPSPVLRIIIDNMFYPV
TLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQAKLSLDGQNIYNSCCTLRI
DFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPNMAGLSKDSSSLLGTPSGMVGPYS
GGGAYGSSLSLSQGGGTISPLSAAAAAAAAAGRVALSGHSGVSGVLLASNLNEEMITPHS
LFTLFGVYGDVQRVKILYNKKDSALIQLADGNQAQLAMSHLNGQKMYGKIIRVTLSKHQT
VALPRDGLDDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSSTLHLSNIPEDVTEEDISLL
FSNAGGTVKAFKFFQDHKMALLQMSTVEEAIQGLIDLHNYDMGSNHHLKVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgtggcagttggcgttaagagaggctcagacgaactgaacctctacagc
agcagccccaactctgttacagccaacggcggcgacagcaagaagctgagggtggaggag
cgtgccgagagccccccctcccgcgtgctccacatccgcaagctccccagcgaggtgtct
gagaccgaggtcatcgccctgggcctgcccttcggcaaggtcaccaacatcctgatgctg
aaggggaagaaccaggccttcctggagctgggcaccgaggaggccgccgttaccatggtg
aactactacacggccgtcacgcctcaggtgcggaacgttcccgtgttcatccagttctcc
aaccacaaggagctgaagaccgacagcgccctcaaccagagggcccaggcggtgctccag
gcggtgtcggcggtgcaggaggggggctcccctagctctgaccccggggccctggacagc
ctggcccccgcccccagccctgtcctcaggataatcatagacaacatgttctaccccgtc
accctggacgtgctgcagcagatcttctccaagtttggcacagtgatgaagatcatcacc
ttcaccaagaacaaccagttccaggccctgctgcagttcagcgagcctgtcaacgcccag
caggccaagctgtctctagacggtcagaacatctataactcctgctgcacgctgcgtatt
gacttctctaagctggtcaacctgaacgtgaagtacaacaacgataagagtcgtgactac
acgcgtccagagctgcccgcgggagacggccagccccccgtagaccccaacatggctggc
ctaagcaaggactcctcctccctgctgggtactccctccggcatggtgggcccctactct
ggaggtggagcctacggatcctctctctctctctcccagggcggaggtaccatcagtccc
ctgagtgcggcggcggcagcggcagcagctgcaggcagggtggctctgtctggacactct
ggagtcagcggagtcctgctggccagcaacctcaacgaggagatgatcacgccccacagt
ctctttactctctttggggtgtacggtgacgtgcagcgcgtgaagatcctctacaacaag
aaggacagcgctctcatccagttagctgatgggaatcaggcccagctggctatgagccac
ctgaacggtcagaagatgtacggtaaaatcatccgtgtgacgctgtccaagcaccagacg
gtggctctcccccgggacgggctggacgaccagggcctcaccaaggacttcagcaactcc
cccctgcaccgcttcaagaagcccggctccaagaacttccagaacatcttccccccctcc
tcaacgctccacctctccaacatcccggaggacgtaacagaagaagacatcagcctgctg
ttctccaacgctggaggcacggtgaaggccttcaagttcttccaggaccacaagatggcg
ctccttcagatgagcacagtggaggaggccatccaggggcttatcgatctccacaactac
gacatgggatccaaccaccacctcaaggtctccttctccaagtccaccatctag
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