Osmerus eperlanus (European smelt): 134036265
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Entry
134036265 CDS
T10927
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2 isoform X1
KO
K06246
laminin, gamma 2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04382
Cornified envelope formation
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134036265 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134036265 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134036265 (lamc2)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
Mod_r
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
134036265
NCBI-ProteinID:
XP_062337108
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Position
16:7827119..7838233
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AA seq
1133 aa
AA seq
DB search
MKNISWISLCGMFLLTRSVQGTFRYQASVRCECNGKSTYCYIDTLGLHCVDCQENTEGRH
CEKCKTGFYHQRAGESCVPCACSTTGSAGPNCDSRGQCSCKTGVMGDKCDQCPNGKPLTP
AGCAQSSSQLIDDMVKPFPCFCYGHSSQCSVAQGYSVSTISSTFDNGPEGWRAATAQGVT
RSQVQFRWSPKHQDIEVISEDIMPVYLYAPDTYLGNKLLSYGQNLSFSLRLDRGVRYPST
NDVVMEGSGLRVASSLGNLRTVVTCGLKITYTFRLDEQASSKWKPHLSPFQFQTLLQNLT
AIKIRGTFGENGRGYLDNVRLVTARQAPGADPATWVQSCSCPSGYEGQFCESCAAGFKRR
SLSEGLFSSCLPCSCRGGSCDPETGDCYSADETPNGRSCQSGYYSDPAQPQSCRKCPCPT
GVTCSIRPGTVEVQCNRCPPGSTGPSCHTCEDGFYGDPLGQRGSQQPCQRCQCNGHIDPN
AVGNCDAQTGECLRCLNQTRGFNCESCLEGHHHSQPTDACKPCACNSQRSLSNQCSDMGQ
CSCREGFEGLKCQRSACPSCFNPVKTKMERYTHKLQELETLFTGMETGTLPVNDAQMERT
IRAAEKLVLDLQSKAANLTGTEKDLQAHLSDISRSHKTELRDIGAISKTVDDINLQEQKY
REKVSNVQQLIKEIRLLLGEAKLTINSADLPQADAVSGVDILPTLVQKAHILADDHQSIA
ATVVRTANSALAESERGLALMRAAMNKENKINELISDLKSQYDLNSAKVKALEAQATRTS
SAAGDESKMAIDTLKQIASLEQNLPDPLKKDIDAVVARLDGLKDQVQKNLTEYEVLQNEV
QEDRAALEDLLVQKKAAQQDYDRLLARANAAKAETVFALNGFTDNMNKLDDTLTNLKGFD
DQISKNKALADEAIKKLPSINATIQQAVGNNSETLFIIGSVSGDYDDAQGTVNNLEAVVS
QLEEMSGSLPSYGDLVKDTTKLRADLKGLQKQAVDIEGKMVSETGNAQLQKDRAEEAAMK
ATGAYNNARQTKDAVDETLIIINNLLGVIGEPGSVDEERLAQLEDSIANARSQVNQQLRP
RLKDLEEKEAAQRARLSSLDLDIDTILDNIRNLEDIRKTVPKGCYNSPPIERP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacataagttggatatccctatgtggaatgtttcttttgaccaggtcggttcaa
ggaaccttcagatatcaagcatcagttcgttgtgaatgcaacggcaaatcgacctattgc
tacattgacaccttgggtctccattgtgtggactgccaggagaacacagaggggaggcat
tgtgagaagtgcaaaactggattctaccaccagagggcaggagagagttgtgtgccctgt
gcttgtagtacaacaggttctgctggtccaaactgtgacagcagagggcaatgcagctgt
aagacaggggtcatgggggacaagtgtgatcagtgccccaacggaaaacctctgacgcct
gcaggctgtgcacagagcagtagccagctcatagatgacatggtgaagccctttccatgc
ttttgctacggacactcatctcagtgttcagtggcacaagggtactctgtttccacaatc
tcttcaacttttgacaatgggccagagggatggcgtgctgccacagcccagggagtgacc
cggtctcaggtccagttccgttggtcccccaaacatcaagacattgaggtcatctctgaa
gacatcatgcctgtctacctctatgcccctgacacctacctgggcaacaagttactgagc
tatggtcagaacctgtctttctctctgcgattggaccgaggggtccgatacccatccacc
aatgatgtggttatggagggctcaggcctgagggtcgcttcctccctggggaacctacgc
actgttgtaacctgtggtctgaagatcacctacacattcagattggatgagcaagcaagc
agcaaatggaaacctcacctgtcacctttccagttccaaacactgctacagaacctgaca
gccatcaaaatcagagggacatttggtgaaaatgggcgtggctacctagacaatgtgcgc
ctggtgactgcacgtcaggccccgggagctgacccggccacatgggtgcagagctgcagc
tgccccagtggatacgagggccagttctgcgaaagttgcgccgcagggttcaagagacgc
tccttgagcgaaggtctcttcagctcatgtttgccctgcagctgcagaggaggaagctgc
gatcctgaaactggtgactgttactctgcggacgagacccctaatggtcgatcatgccag
tctggctactacagtgaccctgcgcagccccagtcctgccggaagtgtccctgtcccact
ggagttacctgttccatcaggcctgggactgtggaggtccagtgtaaccgatgcccccct
ggctccactggtcctagttgccacacctgcgaggatggtttctatggggatcctctggga
cagcgtggttctcagcagccctgccaacgatgccagtgcaacgggcacatagaccccaac
gcagtgggtaactgtgacgcccagactggggagtgcctgaggtgcttgaaccaaaccagg
ggattcaactgtgagagctgcctggaaggtcaccaccacagccagcccacagatgcctgc
aaaccttgtgcctgcaattctcagcggtccttgtcaaaccaatgcagtgacatgggtcag
tgctcatgcagagagggctttgaggggttaaagtgccagcgctctgcttgcccctcttgc
tttaatcctgtcaaaactaagatggagcgatacactcataaactgcaagagctcgagact
ctgtttacaggcatggagactggaacgttgccagtcaatgacgcccagatggagaggaca
ataagagcagctgaaaagctagtattagacctgcagagcaaagctgcaaacctcacagga
acagagaaggacctgcaggctcatctctcagacatcagtcgaagccataaaactgagtta
agagatatcggggccatctcaaaaaccgtggatgacataaatctgcaggagcagaaatac
agggagaaggtctccaatgtccagcagcttattaaggagataaggcttctgctaggggag
gcaaaactcaccatcaatagtgctgacctccctcaagctgatgccgtatctggtgtggac
atcctccccactttggttcagaaagcacacattcttgctgatgatcaccagagcatagcg
gccacagtagtgaggacagccaacagcgccctggctgagtctgagaggggtttggctctt
atgagagccgccatgaataaggagaacaagattaatgaacttatcagcgacctcaaaagc
cagtatgatttaaactcagccaaagtgaaggctctggaggctcaggccactcgaacgagc
agtgcagctggagatgagagcaagatggcaattgacaccctgaagcagatagcttccctg
gagcagaacctcccagatcctctcaagaaggacattgatgcagtggttgccaggttggat
ggcctgaaagatcaggtgcagaagaacctgacagagtatgaggtgctccagaatgaagtc
caggaggacagggctgcattggaggacctcctagtccagaagaaagcagctcagcaggat
tatgacaggctccttgccagggcaaatgctgcaaaggcagagacggtgttcgctctgaat
gggttcactgacaacatgaataagttggatgatactctaaccaatcttaaaggatttgat
gaccagatcagcaagaacaaggctttagctgatgaggccataaaaaagctacccagtatc
aacgccaccattcagcaagctgttggcaacaactccgaaaccctattcatcattgggagt
gtatccggcgactacgatgacgcacagggaactgtaaacaacttagaggccgttgtctct
caactagaggaaatgtctggttccttgccgagttatggtgatctggtgaaggacaccacc
aaactgagggcagacctgaagggtctgcagaagcaggctgtggacatcgaggggaagatg
gtttcagaaacgggaaatgcccagctgcagaaagacagagctgaggaggctgcaatgaag
gccactggtgcttataacaatgccagacaaaccaaagatgcagttgatgagactcttata
atcatcaacaatctcctgggcgtaattggtgagccaggcagcgtggatgaggagaggttg
gctcagctggaggactccattgctaatgctcgtagccaggtgaaccagcaactcaggcca
cgcctgaaggaccttgaggagaaagaggctgctcagagggcccggctgtcaagtcttgac
cttgacatcgacactatcttggacaacatcaggaacctggaagacatccggaaaacagtc
ccaaagggttgctacaactctcctcccattgaaagaccataa
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