Osmerus eperlanus (European smelt): 134036293
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Entry
134036293 CDS
T10927
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134036293 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134036293 (vcpip1)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134036293 (vcpip1)
Peptidases and inhibitors [BR:
oep01002
]
Cysteine peptidases
Family C64
134036293 (vcpip1)
Ubiquitin system [BR:
oep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
134036293 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
PAP1
Motif
Other DBs
NCBI-GeneID:
134036293
NCBI-ProteinID:
XP_062337150
LinkDB
All DBs
Position
16:complement(5185294..5192447)
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AA seq
1180 aa
AA seq
DB search
MSMLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQKNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQSGKAKLLR
EMNQGEMFDCSLLGDRAFLIEQEHVSTVGYGKDRSGSLIYLHDTLEEIKKANSNRECFIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
HCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTVVPKLPARLLPKAWGVPQELIKKYIK
LEQDGSCVIGGDRSLQDKYVMRLVNAMEEIFMEKHGIHPALVADVHQYVYRRTGVIGVQP
EEVTEAAKKSVMENRLHRCLICNALSELHVLAEWLAPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPERDVLIPDYKLSSLNTCNWCHGTSVRHIHGNGSIVYLDGDRTNTRSQGG
KCGCGFKHFWENKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVDVTLNSNVYDVAMKLV
TKHFPGEFGSEILVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDGVDPLQAAVDNQ
PPTKIILTGQKAKTIHKEELTMSKAERNLQQSIREQASVAQKRRTDQLKQEQKGQGRPSS
PSGASEGSSSSAPATPTKSSFSPTSSKEKKFRVTTSDGRQAMLTLQAQTTFSELQKSIAK
EFAVPPAQQCIRYGFPPKELCPPKDGEENEPVALQHGDRVTVEILRGPEVPSSVPRASSS
HASLHSVKSDDPVTSSRTSNRELQDNIDLEMSSLCLLATLMGEDVWSYAKKLPHLFQQGG
VFYNIVKKDMGLLDGKHCTLPHLSGKTFVYNAAEERLELCVDTAGHFPVGPDVEDLVKEA
LVQLRSETTSRSREGSPSHSLLRLGSGGVVRKKEQLQNVTAFQGKGHSLGSAPPGSSPPE
HKPITRQHSSGVDLSASVSQGPDLSDIPEDATKELVRMAPGFVTMKDSRHLDPDMIEEQR
KKLQEMVSSIQASMDRHLREQQSIAAAPGGSVERTGGARIPAPQSGTANPELSSMDVSAE
HLQREVGAKPGGRDASSEELEEMDSQDAEPTNVMEPMDHS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgctacaaggctccaagaagaaggacaagcgtattttgtctggtacttgccca
gacccaaaatgccaggcgaggctattcttccctgcttacggctcaattagcatcgaatgc
actgagtgtggccaacgccacgaacagaagaatcttttaaatgtggaagaagtaactgat
ccagacgttgtgctgcacaatctgcttagaaatgctctcctcggtgtcactggagccccg
aaaaagggaacggagttggttaaagtaatggggctttcaaattaccattgcaagttacta
tctcctattctaactaggtatggaatggataagcagtcgggcaaagcgaaattactaagg
gaaatgaaccaaggagagatgttcgactgctcactcttaggggacagggcttttctaatc
gaacaagagcatgtctccaccgtcggctatggcaaggacaggtcaggcagcctgatctac
ctccatgacactttggaggagataaaaaaagccaacagcaatagagaatgttttattccc
gtgcatgtggatggagatggacactgtctggtccatgctgtgtccagggcactggtaggc
agagaattgttttggcatgccttaagagagaacttgaaacaaaacttcaagcaaaacctt
gatcgctacaaggctctcttccaggattttattgatgctgctgaatgggaggacatcatc
aacgaatgtgaccctctgtttatcccaccagaaggtgtgccactgggactacgaaacatt
cacatatttggcttggcaaatgtactacaccgccccataatcttgttagattcactgagt
ggaatgaggagctctggggattactctgcaacttttcttccaggtctagtgccagaagag
cactgtaaggggaaagacggaaagttcaacaagcccatctgcatcgcatggagtagctca
gggaggaaccactacatccctctagtgggaatcaagaatacagtggttcccaagttgccg
gccaggcttctccccaaggcatggggagtgccacaggagctcatcaagaagtacatcaag
ctggaacaagacggaagctgtgtgattggaggagacaggagcttgcaagacaagtacgta
atgagactggtcaacgccatggaggagatcttcatggagaagcacggcatccaccccgcc
ttggtggctgatgtgcaccagtacgtttacagacggacgggtgtgattggagttcaaccg
gaggaggtgacggaggcggccaagaaatctgtcatggaaaaccgtctgcaccgctgcttg
atctgcaacgccctctcagagctccacgtgctagctgagtggctggcgccaggtggcaag
ctctacaacttggcaaagtccactcacgggcagctgagacctgacaagaactacagcttc
ccgttaaacaacgttgtctgctcctacgacccagaaagggacgttctcattccagactac
aagctgagctctctaaacacctgcaactggtgccacggcacatcagtgcgccacatccac
ggcaacggctccatcgtgtatctggacggagaccggacaaacactcgatcccaggggggg
aaatgtggatgcgggttcaagcacttctgggagaataaggagtatgataatcttccagag
gccttccccatcaccctggagtggggtggacgtgttgtgcgggagacggtgtactggttc
cagtatgaggtggacgtcaccctgaacagcaatgtctatgacgtcgccatgaaacttgtc
accaaacatttcccgggggagtttggaagtgagatccttgtacagaaggtggtgaacacc
atcttgcatcacactgccaaaaagaaccctgacgagtacaatccggtttccatcgacgga
gcgcacgcccagaggctcaccgatggggttgaccctctgcaggcggctgtagacaatcag
ccgcccaccaagatcatactcacaggtcagaaagcaaagactatccacaaagaagagctg
accatgagcaaggccgaaaggaacctccagcagagcatcagagaacaggcctcagtggcc
cagaagaggaggactgaccagttgaagcaggaacagaagggacagggtcgaccatcttcc
ccaagcggtgcttcagaaggttcctcttcctctgccccagccactcccaccaaatcctcc
ttctccccaacctccagtaaagagaagaagttccgcgtgacaaccagtgacggcaggcaa
gccatgctgactctccaggcccagaccaccttttcagagctccagaagagcatcgcgaaa
gagtttgctgtccctccagcccagcagtgcatccgctacgggtttcctcctaaagaactt
tgccctcctaaggatggggaggagaacgagccggtggccttgcagcatggggaccgggtc
acggtggagatactgaggggaccagaggtcccctcctccgtccctcgagcttccagttca
catgcgtccctccactctgtgaagagcgatgatccagtgacttccagtagaacgagtaac
agagagctgcaagacaacatcgaccttgagatgtcctctctctgcctcctagcaaccttg
atgggagaggatgtctggtcatatgcaaagaaactgcctcacttattccagcagggtgga
gttttctacaacattgtgaagaaagatatgggactgctggacggcaagcactgcaccttg
ccccacctcagcgggaagacgtttgtctacaacgctgcagaggagcgtctggagctgtgc
gttgacaccgcgggacacttccctgtgggccccgacgtggaggacctcgtcaaggaggcc
ctggtccagctgcgctctgagaccacttccaggagccgcgaggggagcccatcccacagc
ctgctacgtctcggcagcggcggcgtggtgcgcaagaaggagcagctccagaacgtcacg
gccttccaggggaaaggtcactccctgggcagtgctccccctggctcctcccccccggag
cacaagccaatcactcgccagcacagcagcggcgtggacctaagcgccagtgtgtcccaa
ggccccgacctctcggacatccctgaggacgccaccaaggagctggtacgcatggcgcct
gggtttgtcaccatgaaggacagccgacacctggaccctgacatgatagaggagcagagg
aaaaagctacaggaaatggtctcctccatccaggcctccatggaccgccacctgagggag
cagcagagcatcgctgcagcccctgggggctctgtggagcggacaggcggggccaggata
cccgctccccagtcaggcacggccaacccagagctctcatctatggacgtgtctgcggaa
catctacagagggaggtgggagccaagcccggagggagagatgctagctctgaagagctg
gaggaaatggatagccaggatgctgagcctacaaatgtgatggagccaatggatcattcc
tga
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