Osmerus eperlanus (European smelt): 134036360
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Entry
134036360 CDS
T10927
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134036360 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134036360 (wdr33)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134036360 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
134036360
NCBI-ProteinID:
XP_062337252
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All DBs
Position
16:7562088..7575706
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AA seq
1155 aa
AA seq
DB search
MATDIGSPPRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAACYNDLVPPVGMLNNSMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWN
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDMEPNSMAAIPGMGIPEQLKAAMEQEQSDVTPELEMSIPGLDWGMEEVM
LKDMKKVPQKKVPYAKPIPAQFQQAWADNKVPAMPPGGEMPKERKVEQKGDGKKKSQADM
EQEMAALQYTNPMLLEQMKMERMNQLQADGSLPPQGQQAPMPPFPGQGGPMPPPPQGFPQ
SMPPQQMQHNMGPPMGPGGMQAPFMPPGQMGQHHQGPPQGMMGPPDIHGPQGMQRHPGPH
RNMGPQGPHGMPPGPRGPPGGMQGPPGGMMGPPPRGMGPRDTQGPPPHVPQGNMMGPQGP
MQGGMMGPPMQNPTRTHGNYGMGNMQGPPPGGMHGPPPGNMQGPPGNMQGPPGNMAPSYM
PHQQAGQNSGPMMHGMGQQGPNGKDSRGPPNHHMGPLADRQGPGGPGGPDQGSAPYWGGD
SQQGRGRGHPDFEGGQEFHGRGEDSWRQGPGQGYQGGHRGGGGGAGGGGGSGGGGGNGGN
WGSEERFPRDGGEFRGRRDDRYDNYGGPGEEFDQRQRDRRPPPRHGQDSDDTYRGGGGPG
RSGGRGFSDEYGGQEENFEGPDEMGRGWDNGGRGRPPRGGGPPRGGGGRKGLLPTPDEFP
PHFEGGRSQESWEGGRDQGHEPYREGQRPEHAMHDSPSPASRERSSSLQGMDMASLPPRK
RPWHDGPGNGDPRDRESPGTGAEDRTGGRPPQREDGSYGPSSRGGRGGWGPGAGSAGPTT
RRGTVRGAPRGVRGR
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacatcggctccccgccgcggttcttccacatgccgaggttccagcaccag
gccccgcggcaggtgttctacaaacggcctgactttgcccagcagcaggccatgcaacag
ctgaccttcgatggcaagcgcatgaggaaagcagtcaaccgcaagaccatcgactacaac
ccctcagtcatcagatatctggagaaccggttatggcagcgggaccacagggatttccgt
gccatccaaccagatgcagcatgctacaatgaccttgttcctccagtgggtatgctgaac
aactccatgaatgctgtcaccacaaagtttgtccgaacttccaccaacaaagtgaagtgt
cctgtgtttgtcataaggtggactcctgagggtaggcgtctcgtcaccggggcctccagc
ggggagttcaccttgtggaacggactcacgttcaactttgagaccattctacaggcccat
gacagccctgtgagggccatgacctggtctcacaacgacatgtggatgctgactgccgac
cacggaggctacgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggcgattagagaggccagtttctcacctacggataataaatttgccacttgc
tctgacgacggaacagtgcgcatctgggacttcctgcgctgccacgaagagagaattcta
agaggtcatggtgctgacgtgaagtgtgtggactggcaccccaccaaaggcttggtggtc
tctggtagcaaagacagccagcagccaatcaaattctgggatccaaagacaggccagagt
ttggctacacttcatgcccataagaacactgtgatggaagtgaagtggaacctcaatggt
aactggctcctcacagcttcgcgtgaccacctgtgtaagctctttgacatccgcaacctg
aaggaggagctccaggtgttcaggggacacaagaaagaggccacagccgtagcatggcac
cccgtccacgaggggctgtttgccagcggaggctcggacggatcactcctcttctggaac
gcaggtgtggagaaggaggtgggtgggatggagatggcccacgagggcatgatctggagt
ctggcatggcaccctctaggacacatcctgtgctctgggtccaacgaccacaccagtaaa
ttctggacaagaaatagacctggagacaaaatgagggacagatacaatctgaacttgtta
ccaggaatgtcagaagatggagtggagtacgatgacatggagcctaacagcatggctgcg
atccctggcatgggaatccccgagcagcttaaagctgctatggagcaagagcagagtgat
gttacacccgagttggagatgtccatcccgggcttggactgggggatggaggaagtcatg
ctgaaagacatgaagaaggttccacagaagaaagtgccctacgctaaacccatccctgcc
cagttccaacaggcctgggcagacaataaggtgcccgcgatgcccccgggcggagagatg
cccaaagaaaggaaggtggagcagaaaggggacgggaagaaaaagtcacaggctgacatg
gagcaggagatggcagccctgcagtacaccaaccccatgcttttagagcaaatgaagatg
gagcgaatgaatcagctgcaggcagatggcagcttgcctccacagggccagcaggcacca
atgcctcccttccctggccagggagggcccatgccccctccccctcagggcttcccgcag
tccatgcccccccagcagatgcaacacaatatgggcccccccatgggcccaggtggaatg
caggctccattcatgcctcctggacagatgggccagcaccaccaggggccccctcagggc
atgatggggccaccagacatccacggccctcagggcatgcagaggcacccaggtcctcac
agaaacatgggcccacaggggccacacggaatgcctcctggacccagaggtccgcctggt
gggatgcaagggcctcctggtgggatgatgggtcccccaccacgaggaatggggcctaga
gatactcaggggccccctccacatgttccccaagggaacatgatgggtccccagggcccc
atgcagggtgggatgatgggaccccctatgcagaaccctacaaggacacatggaaattat
gggatgggcaatatgcaaggacctcctcctggagggatgcatggcccacctccgggtaac
atgcaggggcccccaggcaatatgcaggggccacccggaaacatggcgccatcgtacatg
ccacatcagcaggcgggtcagaactctggaccaatgatgcatgggatgggacagcaagga
cccaatggcaaagattctcgaggtcctcctaaccaccacatgggtcctctagccgaccgc
cagggcccagggggacccgggggccccgaccagggctcggcgccttactgggggggggac
tcccagcaggggcgtgggcgtggacacccagactttgaggggggtcaagagttccatggc
aggggagaggacagctggaggcaagggcctggccagggttaccaaggagggcatcgggga
ggaggaggaggagcaggaggtggtggaggcagtggaggtggagggggtaatggagggaac
tggggctccgaggagaggttcccccgtgacggaggagagttccgcggacgcagagatgac
agatatgataattatgggggcccgggagaggagtttgaccagaggcaaagagacagacgt
cctcctccgagacatggccaggactctgatgacacgtacagagggggcggcgggccaggg
cgctcgggaggccgggggttttctgacgagtacggtggacaggaggagaacttcgagggc
ccggacgagatgggccgagggtgggacaacggaggaagggggagacccccccgtggaggt
ggaccaccgagaggaggtggtggacgcaagggcttgctccccacccccgatgagttcccc
ccacactttgagggaggcagaagtcaggagtcctgggagggcgggagagaccaaggtcac
gaaccgtaccgcgagggccagagaccggagcacgcgatgcatgacagcccgtcacctgcc
agccgcgagcgctcctcctccctgcagggcatggacatggcctctctgcccccgcggaaa
cggccctggcacgacggcccgggcaacggagacccccgcgacagagagtcccctgggaca
ggggccgaggacaggacaggaggccgacccccacagcgagaggatggcagttacggaccc
tcgtcccgcggaggccggggaggctggggccctggcgcgggtagcgctgggccaaccact
aggagagggacggtccgtggtgcccccaggggagtacgcggtcggtag
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integrated database retrieval system
