Osmerus eperlanus (European smelt): 134036374
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Entry
134036374 CDS
T10927
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134036374 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134036374 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oep00536
]
134036374 (shhb)
Peptidases and inhibitors [BR:
oep01002
]
Cysteine peptidases
Family C46: hedgehog family
134036374 (shhb)
Glycosaminoglycan binding proteins [BR:
oep00536
]
Heparan sulfate / Heparin
Morphogens
134036374 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hint_2
Vint
Hom_end_hint
Motif
Other DBs
NCBI-GeneID:
134036374
NCBI-ProteinID:
XP_062337276
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Position
16:complement(10824317..10828293)
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AA seq
412 aa
AA seq
DB search
MLIILRIALVGFVCLFLASAGSACGPGRGYGKRRHPKKLKPLTYKQFIPNVAEKTLGASG
KYEGKITRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQWPGV
QLRVTEAWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLCRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGFASVILEDGQRKMVKDLKVGDRVLTADDEGNIVSSEFLM
FIDRDPKTIREFYVFETEEPRSTLRLTPAHLVFVTNNGTGSDTTAVFASNVTPGQKVLVV
DDALEHLKAVTVQRIFVEEYEGSYAPVTSHGTIIIDQVLVSCYAVIEDHKWAHWAFAPVR
VGHEFMFLTGLLKEREYPPTRDGIHWYSDILYHMGTWLLDSNNFHPLGMSKS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgctgataattttaagaatagcgctcgtgggatttgtctgcctgttccttgcatccgct
gggtctgcctgcggtccaggcagggggtatgggaaaaggagacatccgaagaagctgaag
cctctgacatacaagcagtttattcccaacgtggcagagaagacattaggggccagtggc
aaatatgaaggaaagataactaggaactccgagagatttaaggacttgactccaaactat
aaccctgacattattttcaaagatgaggaaaacactaacgctgacagacttatgacacag
agatgcaaggacaaattgaactctttggctatttcagtcatgaatcagtggccaggagta
cagctccgcgtgacagaggcttgggatgaggatggacaccattctgaagagtccttacat
tatgaagggcgcgcggtggacatcaccacgtctgaccgggacaggagcaagtacgggatg
ttgtgtaggctcgcagtagaggcagggttcgactgggtatattatgagtccaaagcccat
attcactgttctgtgaaagcagaaaattccgtggctgccaaatcagggggctgcttccca
ggatttgcttccgttattctcgaggatggtcagagaaagatggtgaaagacttgaaagtt
ggcgacagagtgttgacagcggacgatgagggaaatattgtttctagtgaatttctcatg
tttatcgaccgggatccaaagacaataagagaattctatgttttcgagacagaggagcct
cgtagtacactaagattaacacctgcacaccttgttttcgtcaccaacaacggcacaggc
agcgacacgacagctgtgtttgccagtaacgtaacacctgggcaaaaggtgctcgtggtg
gacgacgctctggaacacctgaaggcagtaaccgtgcaacggattttcgtagaggaatat
gaggggtcttatgccccagtaacctcgcatggaaccatcataatagaccaagttttggtt
tcatgttacgcggtgatagaggaccacaaatgggcgcactgggcctttgcaccggtccgg
gttggtcacgagttcatgttcttaactggcctattgaaggagcgcgagtaccctcctacc
agagatggaatacactggtactcggacattctataccacatgggaacatggctgctggac
agcaacaatttccaccctctaggaatgtcgaaaagttga
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