Osmerus eperlanus (European smelt): 134036550
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Entry
134036550 CDS
T10927
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134036550 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
134036550
NCBI-ProteinID:
XP_062337530
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Position
16:6463938..6471681
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AA seq
702 aa
AA seq
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MDLGSPKWVTMLIVCWLYKSINCNSVEQKIYVELNNTVPCVRLLNATHQIGCQSSLSGDV
GVLHVLESEADLDWPLSSGPNPPYMVILESPLFTRSIMMKMKNASRRIAGVAVVIPNASP
PQGFSPHTTCPNENTGVYSEKYGSHLANCNTTVWNPLGNGLSYEEFDFPIFSLKEDNQTE
VIKQCYFQHNRPANSSAPVYPLCAMQLYSHMHAVTDTATCMRRNDIFSINPEMMCDPLGD
YNVWSTIRPYNNSVKGHKENETVVLAAARLDSRSFFWDVATGAEGSISGFVTLLAAAQAL
REVTVVAPPTRNILFAFFQGEAFDYIGSSRMVYDMENNKFVIDLDNIHSILEVGQVGVRT
GSNLWLHSDPVSRSNASVNTEVMEMLANLRRAAAGLNFSLTEPTVSQPLPPSSLQRFLRA
RPIPGVVLADHQSAYNNKYYESVYDNDAYLNLTYPAGLNPEEKLEFETDTAKALAEVATM
VARALYKQADGDEAQFDNIVADPKIVTQMLYGFLVESDNSWFQALLAPELKSLLQPSPPE
YYVGVTMSANSAVNTPTRLVQHILANLTGNATSLNQTSCQKPDDLENESKHLYSYLWVQG
TVPPNGTEREGFCVRSSVRLAKALSPAFELGEYSSSAYSTWTESRWKFIKARIFLVASHD
LEMLTLGVGVAVLLASLLVTYFVSSKADVLFSSAREPGNATY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggatttgggatcgccgaaatgggttacaatgttaatagtttgttggctttacaaaagt
ataaactgtaattcagttgagcagaagatctatgtggagcttaacaacactgtcccgtgc
gtccgactgctcaacgcaacacatcagataggctgccagtcctctttgtcaggtgatgta
ggtgtgcttcatgtattggaatctgaggcagacctggactggcccttgagctcaggaccg
aatcctccctatatggtcatattggagtcaccactcttcaccaggtctatcatgatgaag
atgaagaacgcgtcacgcaggatcgcaggcgtggccgtggtgatcccgaatgcgagccca
ccccagggcttctccccacacacaacctgccccaatgagaacacaggtgtgtactcggag
aagtatggttcccacctggccaactgtaacacgacggtgtggaacccgttggggaacggt
ctctcctacgaggagtttgacttccccatcttctccctgaaagaagacaaccagacagag
gtcataaagcagtgctacttccagcacaacaggccggcgaacagcagcgctccggtgtac
ccgctgtgcgccatgcagctctactcccacatgcatgccgtcaccgacaccgccacctgc
atgaggcggaatgacatcttcagtatcaacccagagatgatgtgcgaccccctgggtgac
tataatgtgtggagcaccatccggccctacaacaactccgtcaagggccacaaggagaat
gagactgtggtgctggcagcggccaggctggacagcaggtcattcttctgggacgttgcc
acgggagccgagggcagcatctccgggtttgtcactctgctggcggctgcccaagccctg
cgtgaggtcactgtggtggcccctcccacgcggaacattctttttgccttcttccaaggg
gaagcctttgactacatcggcagctctcgaatggtgtacgacatggagaacaacaagttt
gtcattgacctggacaacattcactccatactggaagtcgggcaggtgggggttcgcact
ggctccaacctttggctccactctgacccggtgtccaggagcaacgccagcgtcaacaca
gaggtgatggaaatgttggccaacctgcgcagagccgccgctgggctcaacttctcattg
acggagcccactgtctctcagcctcttcctccttcctccctccagcgcttcctgcgagct
cggcctatcccaggggtggtgctggcagaccaccaatcggcttacaacaacaagtattac
gagagtgtctatgacaatgatgcctacctcaacctgacctaccctgcaggcctgaaccca
gaggaaaagcttgagtttgagaccgacactgccaaggccctggcggaggtggcgaccatg
gtagctcgtgctctctacaagcaggccgacggagacgaagcgcagttcgacaacatcgtc
gccgaccccaagatagtcacacagatgttgtacggtttcctggtcgagtctgacaacagc
tggttccaggctctgttggctcctgagctgaaatctctcctgcaacccagcccaccagag
tactacgttggagtcaccatgtcggcaaactccgcagtcaacacccccacccgtctggtc
cagcacatcctggccaacctgacagggaacgccaccagcctgaaccagacttcctgccag
aagccagacgacctggagaacgagagcaaacacctgtactcctacctctgggtgcagggc
acggtgccccccaacggcacggagagggagggcttctgcgtgcgctcctcggtgcgcctc
gccaaggccctgtctccggccttcgagctgggggagtactcctcctcagcgtactccacg
tggaccgagtcccgctggaagttcatcaaagcccgcatattcctggtggcgagccacgac
ctggagatgctgacgttgggcgtgggagtggcggtgttgcttgcctctctcctggtgacg
tatttcgtcagctccaaggccgacgtgctgttcagctcggcgcgggagcccggcaacgca
acctactga
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