Osmerus eperlanus (European smelt): 134036682
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Entry
134036682 CDS
T10927
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04020
Calcium signaling pathway
oep04148
Efferocytosis
oep04218
Cellular senescence
oep04310
Wnt signaling pathway
oep04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134036682 (nfatc4)
04020 Calcium signaling pathway
134036682 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134036682 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
134036682 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
134036682 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134036682 (nfatc4)
Transcription factors [BR:
oep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
134036682 (nfatc4)
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
134036682
NCBI-ProteinID:
XP_062337704
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All DBs
Position
16:6423873..6430579
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AA seq
899 aa
AA seq
DB search
MGAAPGSGWEEGEFEFKLVFEEDPPRQLRGPSPMRNVDQEHIITGERTENTLLHLESSSN
VDNHLVTTNAGQPIGIPASPSSASQRAGMHSPPPRRALAREFSGTYESLPARSVQVSESR
VLECPSIQITTISPEDDCAPAGGNYWDTGGGWDRERLYLPLLDPFCYREAGCAGSLSPSP
ASSPSSRGWLSPASSCDSLLVEEEELNEATAHFGLSPSSRPTSPGGKKRRNSPLASPCTS
RRSSYSEDHSVLEGGDSAPQSQAPPSSFELSIPQKTRKTSLEQMSPREVDQDSSSPAPGL
PPCLPPEHLQQQQPQQLQQARREPPSLGMDYLSVPPSLGWGRTRASAHSPLFRSNALPPL
DWPLPSQFDQYELRIEVQPRPHHRAHYETEGSRGAVKASPGGHPVVKLTGYTERQPLSLQ
VFVGTADDRSIRPHPFYQIHRVTGKMVGTASQESIQAGTKILDIPLNQETNMTALIDCAG
ILKLRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPLAPPGRVLALQVASLPIECSQR
SAQELPVVESVSITSCSVEGGEELLLSGTNFLPMSRVLFMERGTDGKLQWEEEAHVDRDN
SNEGLLCVQVPAYSDLSVSRPVPVCLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLSHPSV
LPLEGVTLHLRGDPPPEDPGQGFHLPPYPSTYSPPYPGHGYNEEYNCPKPEAADDAGGSR
GALSERHPSFESLELGFTELLPPLYPRAPQPPSPSPSPWLDSPYLSSSPSPSHSSSLSPF
PAGSPISSSPLPPIVSSSSPYPQYPYTQEVCPSPPSHHSPYQDFYPPPYSHYEAWESQGG
VQGAGGEREPPSGPKMHESPLEFASSSTMQHITLEEVNEFIGEDIRSFHSSSQMDSQPS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggttcgggctgggaagagggcgaattcgagttcaagttggttttt
gaggaggacccgccgcgccaactccgggggccatctccaatgcgcaacgtggaccaggag
cacatcatcacgggggagagaacggagaacaccctgttgcaccttgagtcgagcagtaac
gttgacaaccacctggttaccacaaatgcaggccagccaatcggcatccctgcctcacct
tcatcagccagtcagagggccgggatgcattccccacctccgaggcgagccttggcgagg
gagttcagtgggacctatgagagccttccagcccggtctgtacaggtgtcggagtctcgt
gttttggagtgccccagcatccaaataacaaccatctcccctgaggatgactgtgctcca
gcaggcggaaactactgggacactggaggaggctgggatcgtgagcgcctctacctcccc
ctcctggaccccttctgctaccgcgaggcaggatgtgcaggctcactcagccccagcccc
gcctccagcccctcttcccgaggctggctcagcccggcgtccagctgcgattcgttgctg
gtggaggaggaggagctgaatgaagccactgcacactttgggctttccccttcctctagg
cccacctccccaggggggaaaaaaaggcgtaattcccccctggcctctccctgcacctca
cgcaggagcagctactccgaagaccacagcgtcctggaggggggagactccgcccctcag
tcccaagctccgcccagtagttttgagctgagtatcccgcagaagaccaggaagacatct
ttggagcagatgtctcccagggaggtggatcaggactcctcatccccagccccaggcctc
cccccctgcctgccaccagagcacctccagcagcagcagccgcagcagctgcagcaggcc
aggagagagcccccatccctgggcatggactacctgtccgtgcccccatcccttggctgg
ggcaggacccgggccagcgcgcacagccccctcttcaggtccaatgctctgccaccactt
gattggccgctgccgtctcagttcgaccagtatgagctgcgcatagaggtgcagccacgc
ccccaccaccgagcccactacgagacggagggcagccgaggagccgtcaaggcctcgccc
gggggacatcctgtggtcaagctcacaggctacacagagagacagcccctctccttgcag
gtgtttgtcggaacagcagatgataggtccatccggccacaccccttctaccagatacac
agggtgacagggaagatggtgggcacggccagtcaggagagcattcaggcgggcaccaag
atactggatatccccctcaaccaagagaccaacatgactgcacttatcgactgtgccggt
atcctgaaactgaggaactcggacatcgagctacggaaaggagagacagacgtagggagg
aagaacacgcgcgtgcgtctagtgttccgtacccacctccccctggccccgcccctggcc
ccgcctgggcgtgtactggccctgcaggtggcctccctgcccatcgagtgctctcagcgt
tcagctcaggagctgccggtggtggagtctgtcagcatcacttcctgttctgtggaggga
ggggaggagcttctgctgagcggcaccaacttcctgccaatgtccagagtgctcttcatg
gaaagagggacagatggcaagttgcagtgggaggaggaggcgcatgttgaccgggacaac
agtaatgagggtttgctgtgtgtgcaagttccagcgtacagtgacctttcagtgagtcga
ccagtccctgtgtgtctgtacgtctccaatggcaagagaaagagaagcagcacccattgt
ttcaaatacctgcccatcatgtttaaagaggaggacccccttctgtcccacccttccgtc
ctccccctggagggggtgacgctacatctcaggggtgacccgcctccagaggacccaggc
cagggcttccacctgcccccgtacccttccacctactcccctccgtacccgggccacggg
tacaatgaggagtacaactgccccaagccagaggcagcggacgatgctgggggttccagg
ggggctctgtcggagaggcaccctagctttgagagcttggagctgggcttcacagagctc
ctgcctcccctgtaccccagggccccgcagccaccctccccgtccccatccccatggctg
gactccccatacctgtcctcgtccccctccccctcccactcctcctccctcagccccttc
cctgccggcagcccaatctcctcctcccccctgccccccattgtctcctcatcctcccct
tacccccagtacccctacacccaggaggtgtgcccctcacccccctcccaccacagcccc
taccaggacttctaccccccgccatacagccactatgaggcctgggagtcccagggaggg
gttcagggagctgggggggagagggagcctccatctgggccaaagatgcatgagagcccc
ctggagtttgccagctcgtccaccatgcaacacatcacgttagaggaagtgaacgagttc
atcggggaggacatccgatcgttccattccagctcacagatggacagccagcctagctga
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