Osmerus eperlanus (European smelt): 134036891
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Entry
134036891 CDS
T10927
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134036891 (si:ch211-106h11.1)
Ion channels [BR:
oep04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
134036891 (si:ch211-106h11.1)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_9
LRR_NXF1-5
Calcipressin
Motif
Other DBs
NCBI-GeneID:
134036891
NCBI-ProteinID:
XP_062338044
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Position
2:24439561..24450490
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AA seq
891 aa
AA seq
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MFSLSELVSLSPGQASSKLLKPWWEVFMDHLVLLMLMVSVLAGTLLLSRDRVVCLPLDPS
SPSSNPSSCSSSSPSSLSSPSSTPSSCSSFSPPPQGRRTQLDYQQYVYVSQVCYHQAPAL
ASRLAPYLTLLQSLSLVLLASGGFWLHFPLSSARVEHFLAILAKCSESPWTSRALSHAAR
HDPAHDNTPIQQEEEEEERGGQRPPPTPSSLLTSSRTRQSSLDSGTDSPLLGRPHPAPPS
PCPSSLSRTSSLSSVCVSPRAQAPRPPAPRQAVTLDRSDGEQARALFERVRRFRAHCENS
DVIYKVYLCQTAFKLLMVVVIVGYTAPLLSSITFCHTCLPQAHGLTGYAAFQCTHALAAL
LHKLMLAYLCLVGLYGLLGLYALYWSLYSSLRQYSFSRLKELCFLGDVPDLCNDLAFLLH
MSDQYDPLLAQRLSVFLSPVSETRLLDEGMRRRWGAERLVSMTTTDGRGRSLLQLVALPR
LPPALFSLSQVEVLKLELVREAKITGQVTGMTSLRELHLYLCSAAVEPGALAFLQEHLES
LHLTFPQASDLPPWALSLRGLQELHLTGRLGCEGGVGRGWALGSLRQLRHLRVLVLRGML
PRVPGELGEVGATLVRLEVHNEGCRLLVLTGLRRLGGLTELVLQGCQLERLPSALLALPA
LRSLDLGHNSLRCLDELPGLGQLRRLSSLCLSHNRVLVLPAGVGLLRGLELLDLGHNQLS
ALPPALFILPRLRRLLLGGNLLEELPGEVGALGALAELDLSGNRLESLPAELWRCAGLRS
LNLAHNSLEGLPPGLGGLGALARLDLRCNSLQELPEELGGCGGLRGGGRLLVEDWLLHTL
PQPVRDFLLSPPGSPLQGTTSETKPSRPESDSFPYFSAAQWSFSSAMESRI
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgttctccttgtcagagctggtgtctctgagcccaggtcaggccagctccaagctgcta
aagccgtggtgggaggtgttcatggaccacctggttctgctcatgctcatggtgtctgtc
ctggctggaaccctcctgctctccagggacagggtggtctgcctgcccctagacccctcc
tcaccctcctccaacccctcctcctgctcctcctcatccccctcttccctctcctcaccc
tcctccaccccctcctcctgttcctccttttccccccctccccagggccggaggactcag
ctggactaccagcagtatgtgtacgtcagccaggtgtgctaccaccaggcccctgccctg
gcctctcgcctagcgccctacctgaccctgctccagtccctgtccctggtgctcctggcc
agcggaggcttctggctgcacttccccctctcctccgcccgcgtcgagcacttcctggcc
atcctggccaagtgcagcgagtctccttggacgtcccgcgccctgtcgcacgccgcccgc
cacgaccccgcccatgacaacacccccatccagcaggaggaggaggaggaggagagagga
ggccagagacctccccccacgccctcctccctcctcacctcctctcggacgcgccagtcc
agcctggactctggaactgacagccccctgctgggcaggcctcaccccgccccgccttcg
ccctgcccctcctccctctcccgcacctcctccctatcctcggtgtgtgtgtccccgcgg
gcgcaggcccccaggccccctgccccccgacaagcggtcaccctggacaggagtgatggg
gagcaggcccgagccctgtttgagagggtccgtaggttcagagctcactgtgagaactct
gacgtcatctataaggtgtacctgtgccagacagcattcaagctgctgatggtggttgtg
atagtgggctacacagcccccttgctgagctccatcaccttctgccacacctgcctcccc
caggcccacggcctgacgggctacgctgccttccagtgcacccacgccctggctgccctg
ctgcacaagctcatgctggcctacctgtgcctggtgggactctatggcctgctgggcctc
tacgcactctactggagcttgtacagctccctccgtcagtactccttctcccgcctgaag
gagctgtgtttccttggcgacgtccctgacctctgcaacgacctggcgttcctgctgcac
atgtctgaccagtacgaccccctgctggcccagcgcctttccgtgttcctgtcgcccgtc
agtgagacgcgcctcctggacgagggcatgcggcggcgctggggggccgagaggctggtc
tccatgacgaccacagacggcagggggcggagcctgctgcagctagtggcgctgccccgc
ctcccccccgccctcttctccctgagtcaggtggaggtgctgaagctggagctggtccgg
gaggccaagatcaccggccaggtgacagggatgacatcactcagggagctgcacctgtac
ctctgctcagcagcagtagagccgggggcgctggcgttcctccaggagcacctggagtcc
ctgcacctcaccttcccccaggcctccgacctgccgccctgggccctgtccctgcgaggc
ctgcaagagctgcacctcaccggccgactgggctgcgagggcggggtgggccggggctgg
gccctgggcagcctccgccagctgcgtcacctccgggtgctggtcctcaggggcatgctg
ccccgcgtgcccggcgagctgggagaggtgggtgccaccctggtccgcctggaggtccac
aacgagggctgccgcctgctggtgttgacgggtctgcgccgccttggcggactgacagag
ctagtgctgcagggctgccagctggagcgcctgccctccgccctgctagcgctgcctgcg
ctgcgcagcctggacctgggccacaacagcctgcgctgcctggacgagctgccaggtcta
gggcagctacggcggctctccagcctctgtctttcccacaaccgcgtcctggttcttccc
gccggcgtgggcctgctccggggcctggagctgctggacctgggccacaaccagctaagc
gccctgcccccggccctcttcatcctgccccggctgcggcgcctgctgctggggggaaac
ctgctggaggagctgccgggggaggtgggggcgctgggggcgctggcggaactggacctg
agtgggaaccgcttggagagcctccctgcagagttgtggaggtgcgcggggctgcgcagc
ctcaacctggcccacaactccctggaggggcttcccccggggctggggggcctgggggcg
ctggcacgcctggatctgcgctgcaacagcctgcaggagctgcccgaggagctggggggc
tgcgggggcctgagggggggcgggcggctgctggtggaagactggctgctccacaccctg
ccacagcctgtcagggacttcctgttgtccccgcccggctcccctctccaaggcacgacc
tcggagacgaaaccgtcacgcccggagtcggacagcttcccctacttctctgctgctcag
tggagcttctcctctgctatggagtctcgcatatag
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