Osmerus eperlanus (European smelt): 134036944
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Entry
134036944 CDS
T10927
Symbol
rnf220a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220a isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134036944 (rnf220a)
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134036944 (rnf220a)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134036944 (rnf220a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
134036944
NCBI-ProteinID:
XP_062338110
LinkDB
All DBs
Position
16:11182625..11273537
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AA seq
706 aa
AA seq
DB search
MDLHRAAFKMESSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVEKDVHL
PFNNGSYTFASMYHRQGGVPPGFPNRDFPPSLLHLHHQFAPPNLDCSPISMLNHSGVGAF
RPFASPEDRDGAGGYQSAFTPAKRLKGCLEADASPHLRYSDAEGKEYDFGGSQIASSSPS
ALKAVEDAGKKIFAVSGLLSDRETSSSPEDRIERCKKKMSLYDSQAPVCPICQVLLRPGE
LQEHMEQEMERLTHMHLSKTPSQKDGATTPGTPKSLLLSVHIKREGESPVVSPLSSEDAH
HSDRYQTFLRVRANRQTRLNVEDLCWCRRYAKESLKTGTPIGQPNGARLAPCCLRHARIG
KMKRRRPEDGQVCPLCSAPLKGSEEEMSRHVELCLFKREGAFGAEDDSADMDGENGTRFE
EYEWCGQKRVRATTLLEGGFRGTGFAMCSTKESQDSDADLDVDGDDTLEYGKAQYTEADI
IPCSGEDQGDAKEREALRGAVLNGGMPSNRITPEFSKWASDEMPSTSNGEGSKADPGATA
SSSTSCSSLVPRTCKNSEIEKITEDSTATTLEALKARIRELEKQILRGDRYKCLICMRKR
FQSGAEDKSLGAGPLVAAVAPKADAASSKPLPLSIYCMYRGYVMGCGGGIKRLLPLRRDS
YTMPLTSIQCWHVHCEECWLRTLGNKKLCPQCNTITSPGDLRRVYL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcacagggcggccttcaagatggagagctcctcctacctgcccaacccgctg
gcgtccccggccctcatggtcctagcgtccaccgctgaggccagccgggatgcctccatc
ccctgccagcagccccgccccttcggggtgccggtctccgtggagaaagacgtgcacctg
ccctttaacaacggctcctacaccttcgcctccatgtaccaccgccagggcggcgtcccc
cccggcttccccaaccgggacttccccccgtccctcctccacctccatcaccagttcgcc
ccgcccaacctggactgctcccccatcagcatgctgaaccacagcggggtgggcgccttc
cggcccttcgcttccccagaggacagagacggcgcagggggttaccagtcggccttcacc
ccggccaagcgcctcaaaggctgcctggaggcggatgcctcgccccacctgcgctactct
gacgccgaggggaaagaatacgactttgggggctcccagatcgcctccagctcgcccagc
gccctcaaagcagtggaggacgctgggaaaaagattttcgccgtgtcgggcctgttgtcg
gaccgcgagacgtcgtcgagccctgaggaccgcatcgaacgctgtaagaagaagatgagt
ctgtatgacagccaggctccagtgtgtcctatctgccaggtgctgctgcgtccaggagag
ctgcaggaacacatggagcaggagatggagcgcctcacccacatgcacctcagtaagacc
ccgtcacagaaagatggagcaaccaccccgggaactcccaagtccctgctgctgtcagtg
catatcaagcgtgagggcgagtcaccagtggtctcccccctctcctccgaggacgcccac
cactccgacagataccagacgtttttaagagtgcgggcaaatagacaaacacgattgaat
gtcgaggacctctgctggtgcaggcgctacgccaaggaaagtctcaaaacgggcactccc
attggacagcccaacggagcgcgcctagccccctgctgcctgcgccacgcccggattggg
aagatgaagcgcaggaggcctgaggatggacaggtatgtcctctatgcagcgcgcccctg
aaaggctccgaggaggagatgagtagacatgtggaactctgtctgttcaagagagaaggt
gcgtttggtgcggaggacgactcagcagacatggacggggagaacggaacacgcttcgaa
gagtacgagtggtgcggccagaagagggtccgagccaccaccctgctggagggaggcttc
agaggaacaggcttcgccatgtgcagcaccaaggagagccaggacagcgacgccgacctg
gatgtggacggtgacgacaccctggagtacggcaaggcccagtacacagaggctgacatc
atcccctgctccggagaggaccagggggacgccaaggagagggaggccctgcgaggagcc
gtgctcaatgggggcatgccgtccaacagaataacaccagagttctccaaatgggccagt
gatgagatgccgtctacgagcaatggcgagggcagcaaggcggaccccggcgccaccgcc
tcctcctccacatcctgctcctctttggtaccgcgcacctgtaaaaacagcgagatagaa
aagatcacagaggactcgacggccaccaccctggaggccctgaaggctcgcatcagagag
ctggagaaacagatcctcagaggagaccgctacaagtgtctcatctgcatgaggaagcgt
ttccaatcaggggctgaagacaagagtctgggggcggggcctctcgtggcggcggtggcg
cccaaagccgacgcggccagctctaagcccctccccctcagcatttactgtatgtataga
ggctacgttatgggctgcggaggcgggattaagaggctgctcccgctacgcagggactca
tacacgatgcccctcacctccatccagtgctggcacgtccactgtgaagaatgctggctc
aggactctgggaaacaagaagctgtgcccacagtgcaacaccatcacatcgccaggagac
ctgagacgtgtctacttgtga
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