Osmerus eperlanus (European smelt): 134037382
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Entry
134037382 CDS
T10927
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134037382 (fbxo18)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134037382 (fbxo18)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
134037382 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
F-box-like
UvrD_C
UvrD_C_2
AAA_19
F-box
Viral_helicase1
AAA_30
PhoH
AAA_11
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
134037382
NCBI-ProteinID:
XP_062338605
LinkDB
All DBs
Position
17:2291409..2303479
Genome browser
AA seq
1147 aa
AA seq
DB search
MQSSRFLAVAGKAKRRHLDAEECVELRMTPEGTEALTQPHAFDRSNSDPNRGLYPRSPAK
YPRTPTKRKKLDGDTDKYQRGITQFFPVTGVVKVSPQKTAQPSSSSTADRLSRAFPFTRG
PTLQEAAATPIKEEPLDEFSTPTKEELADIFSTPMKEEPEEEEEVNYLEGMTEAMFGDDD
EFERGATAKTSGEDLARVTEEVEEGVEALPDAHYGLLGTSTRLVQPQGHVEDLPEELLRL
VFSLLSAQDLYRHVSLVCRRWRGIVTQALFVPWKKLYFRYQMREKEAVKEVCLLLRRQNI
VKETPLSVINMIKFMAEYKPTQQVRPEAVLHSVRTHYLFPQAEACLKHRIPDIEGIEGGP
NPWAAMALILVLCPNVGDVLDLVARLKTCLPSLSDISEYLSAMATVLLAMTNEKINVSNR
RYYNIYYVLHLMENAPPRISSRQSGRAPVQVTQEQQQILNHDIQAHHVVKIVAFAGTGKT
TTLVRYTQQSPLLRFLYVAFNKSVASQASRSFPSNVDCKTVHSMAFGAVGIKYQLRKQLF
PSLRPFSVALWLPKGRGGFINAKVVTLTLSSYMASTDTHITPEHVPWKFKNNQGQEQEID
HEAKMMYVRDAQNIWDKMVDLNGGNEKHHMTHDGYLKLWQLSQPCLDKYDVILIDEAQDC
TPAIMDIMLPQRCGKVLVGDPHQQIYTFRGAVNALEHVQHTHLYYLTQSFRFGAEIAYVG
ASILQVCKHVSKVLVGGQQGGSVRGEASDVVSNVQSGVSGAQGKTAILSRCNVTVFSEAV
RLTDANPRCRLHIVGGVENFGLAQIMDIWILMQPEQKRTKGISDGFIRSFSKSVSLGGYA
GLKDYATKTQDRELETKLAVVEKYNNRIPELVNRIKACSEHDHQHAGTPLTHHILLRARP
PARRYAAHASHPAPSTTTSTQVRRSRITSCSEHNLILPLSLYLRHTDTHTHSQHISNNIF
SVHKCIISPRPDFILGTVHKSKGLEFDTVVVTDDFSKVPVARHNLQRIRFSAGDIPDDEW
NLLYVAVTRAQRNLIITKNISNILTLAGEYFLRSEMISTLTSDDRPVCLVRECQNRVMPE
STIVMSKLPIKYMDSEDAGGPLCESCVWQRLGPTACLLAPPERLQALPQTQERLNLPINY
ALLLALF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctagccgttttcttgctgttgcagggaaggcaaagcggagacatttggatgca
gaggaatgtgtcgaactccgtatgacaccagagggtaccgaagccctcacccaaccccat
gcctttgaccgcagcaattccgaccccaaccggggactctaccccaggtcgcctgcaaag
tatccccgaacacccacaaagagaaaaaaactcgatggagatactgacaagtaccagaga
ggcatcacccagttcttcccagtaaccggggtcgttaaggtcagccctcagaaaaccgcc
cagccaagctcgtcctcaaccgcagacagactcagcagagctttcccgttcacaagaggc
ccgacgttgcaagaggcggcagccacgcccataaaggaggagcctttggatgaattttcc
acacccacaaaagaggagctagctgacatattctccactcccatgaaggaggagccagag
gaggaggaggaggtgaactatctggaagggatgacggaggctatgtttggggatgatgat
gaatttgagcgtggcgctacagccaaaacatcaggggaggacctagcccgggtgacggag
gaggtggaagagggagtggaggcccttcctgatgctcactacgggctgctggggaccagc
accaggctggtgcagccacagggccacgttgaggacctcccagaggagctgctgaggctg
gtgttcagcctcctctctgcccaggacctctaccgtcacgtcagcctggtgtgtcgccgc
tggaggggcatcgtcactcaggcactgtttgttccctggaagaagctgtatttccgctac
cagatgagagagaaggaagcagtgaaggaggtctgccttctgctgaggagacagaacatc
gtcaaggagacgccccttagtgtcatcaacatgatcaaattcatggcggagtacaagcca
acccagcaggtgaggcctgaagcagtgttacacagtgtgaggacacactatctctttcct
caggcagaggcctgtctcaaacacaggatccctgacatagaaggcatcgaggggggtcct
aacccatgggcagccatggccctgatcctggtcctgtgtcccaacgtcggggatgttctg
gacctggtggctcgtctgaagacctgcttgccgtcgcttagcgacatttcggagtacctc
agcgccatggcaaccgtgctgctcgccatgacgaacgagaagataaacgtcagcaacaga
cggtactacaatatctactatgtgcttcatctgatggagaacgccccacccaggatcagc
agccgtcagagtgggagagctccggtccaggtgacccaggagcagcagcagatcctaaat
cacgacatccaggcacaccacgtcgtcaagattgtggccttcgcaggcacagggaagacc
accacgcttgtccgctacacccagcagagccctctcctccgtttcctgtatgtggccttc
aacaagtcggtggcttcacaggctagccgcagtttccccagcaacgtggactgtaaaaca
gtacactccatggcctttggagcagttggcataaagtaccagttgagaaagcagcttttc
cccagcctgaggcccttctctgtggccttgtggctgcctaaaggtcgcggggggttcatc
aatgccaaggtggtgactctcacactcagctcctacatggcctcgaccgacacacacatc
acccctgagcatgtgccctggaagttcaagaacaaccagggccaggagcaggaaatcgac
cacgaggccaaaatgatgtatgtgagggacgctcaaaacatctgggacaaaatggtagat
ctaaacggtggtaacgaaaagcatcacatgacccatgatgggtatctgaagctttggcag
ctcagccaaccgtgtctggacaaatatgacgtcatcctcatagatgaggcgcaggactgc
actccagccatcatggacatcatgctgcctcagcgctgtgggaaggtgttggtaggagac
cctcaccagcagatctacaccttcagaggagctgttaacgccctggaacacgtccagcac
acacacctgtactacctcacacagagctttcgttttggagctgagattgcttatgttggt
gccagcatcctgcaggtgtgtaagcacgtcagcaaggtcctcgtgggagggcagcaggga
ggcagtgtgaggggagaggcgtcagacgtggtgagtaatgtccagtcaggtgtgagtgga
gctcaggggaagacggccatcttgtcgcgctgtaacgtgactgtgttcagcgaggctgtg
aggttgaccgacgctaacccccgctgcagactgcacatcgtagggggggttgagaacttt
ggcctcgcacagatcatggacatctggattctgatgcagccagaacaaaaacgcacaaaa
ggcatcagcgacggcttcatcaggagcttctccaagtcagtgagtctggggggctacgcc
ggcctgaaggactatgccaccaagacccaggaccgcgagctggagaccaagctggccgtg
gtggagaagtacaacaaccgcatccccgagctggtgaaccgcatcaaagcctgctccgag
cacgaccaccagcacgcaggtacgccactcacgcatcacatcctgctccgagcacgacca
ccagcacgcaggtacgccgctcacgcatcacatcctgctccgagcacgaccaccagcacg
caggtacgccgctcacgcatcacatcctgctccgagcacaacctaatccttcctctctca
ctctatctacgacacacagacacacacacacactcacaacatatttcgaacaacatattt
tctgtacacaaatgtatcatttctcctcgtccagatttcattctggggacggtccacaag
tccaaaggtctggagtttgacactgtggtggtcactgatgacttctccaaagtccctgtg
gcccgtcacaacctgcagaggatccgcttctcagcaggtgacattccggatgatgagtgg
aacctgctgtacgtggcagtaaccagggctcagaggaacctgatcatcactaagaacatc
tccaacatcctcactctggccggggagtacttcctgaggtcagagatgatcagcaccctg
accagtgacgacaggcccgtttgtttggtccgagagtgtcagaaccgcgtcatgccagag
tctaccatcgtcatgagcaagctgcccatcaaatacatggacagtgaggatgcagggggt
cctctgtgtgagagctgtgtgtggcagcgtttgggccccaccgcctgcctgctggccccc
ccagagaggctgcaggctctgcctcagacacaggagaggctgaatcttcccatcaactac
gctttgctgctcgctctcttctaa
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