Osmerus eperlanus (European smelt): 134037521
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Entry
134037521 CDS
T10927
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03082
ATP-dependent chromatin remodeling
Brite
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
ARID
134037521 (arid2)
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134037521 (arid2)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
134037521 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
134037521
NCBI-ProteinID:
XP_062338819
LinkDB
All DBs
Position
17:15044236..15115388
Genome browser
AA seq
1648 aa
AA seq
DB search
MANSTGKNLPDQRRKGLAFLDELRQFHQSRGSPFKKVPIVGGKELDLNALYIRVVSLGGF
AKVSDKNQWSELGEDFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDEEVQPGNPKP
SLPIGAIPCSYNYQQHTVSDYLRQSYGLSTEFAPTCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHAMQLEKDPKLITLLLAHAGVFDDSLGTFSAVFGMDWKEKTTRNFVKFWKDV
VEDAEVRDLIWDKGSPAQDGMLWDERCNALFHPLRDLGISDMEGQRVLQVAVILRNLSFE
EANVKLLAINRTCLRFLLLCAHCNFISLRQLGLDTLGNMAGELQLDPVDFRTTHLMFHTI
TKCLMSRDRFLKMRAMEILGNLSKVEDNGMLICEYVDHDSYKEVIGLLSLPDLMLLMASL
EVLYLLAELGEIPCSKIASVDRSVDLLVRLVSVDLHTFGPDALTAVRIMEHQSAGSSQTA
EVRPQLVEQVPAPMQGAPMPAARVPVQSTPPGIMELDGEKFTIQWMNAHFEANPDSSVSR
SDMYSEYLAICSKMGRGGILTSSSFLKCLRTIFPNHTVKRQDDPKPNSPVHILVMGVRRR
AIPLPIQLYYQQQPNNAPPLGHRHEGPVEQPPSGLPPGLQFAQPPIPSLNASGASPQVAS
PTPEVPHMAQTTVPRLPQQQLHHNSLIMVQQQAHSRDILKSAMMQSSIPSSPVIQNHFPS
PQPQQPHLGHQSGPVLPPGTPVTLIQQVPQGHILSARVQGSCPPMAQRPPAPHTPPLTVQ
SGLQQDTTGHSATPHYGPGVSVPSSTLQNFQMGGGQVFTIAGVPNTQGSRVTFQNIAPKP
APSQDGGSMSTTATPGQPQQSSVVIINPNAQHSPTYNPAIHQIVLGNPSVMPGAQTIQLA
GQPGTSSNPSSFPPPTPIAQVQSHLPVSQMSSVKHQQQQIHPQPLPLSPQPPPAQPTSTE
SSLIKQLLLPKRGPSTPGGKLILPAPQVPPPTSTRASSPQVLYQQPQQLNVQLVPGSIQA
QGALQTVQLLPGQLLSTSSSATIIQAPAPGGQVTFTVVPNTSFTTSAAAATVSQGAVTPG
MLLPHQTGSVTGGPPPPLRGDKIICQKEEEAKDATGLHIHERKIEVMENSSLAEGGAPAG
KTSNGDLAGTKLLNGRKCVDSSLPPYYSGNSQGVVNGPASEVFPTNGRQQDLQEGHTDPK
KTLVNGVCDLDRGDASNAGTHFNRIIPNHIASKHFGNGEVPSPQKLQDTVQQPPPPQQDT
AKAEPVERLANGPQMVCNKSSVELSNGPLGLNSAAVPTLRQQLVPNAAPTNITVNSHNPA
GLRTVPANGGSAEGRAPKRPAEDDDRDNTTSGIPSKVGVRIITISDPNNAGSSSTMVAVP
AGADPSTVAKVALESATHQRNCSPPQAASTMPGMTPSSPPAIQQTDQTGSPTLNSSILPR
HASPGPSEQIRKSGQNFKCLWQSCKRWFETPSQVFYHAATQHGGKDMYGGQCLWEGCEPF
PRQRLSFITHLQDKHCSRDALLAAMKMEEQKQGINQTTSKPQSVACSTPTPRAQKAIVNH
PSAALMALRRGSRNLVFRDFTDEKEGPMTKHIRLTAALTLKNIAKYSDCGRKLVKRHENH
LSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacgggaaaaaatctaccagatcagcggaggaaagggctggcgttcctg
gatgagctgcggcaatttcaccaaagcagaggatcgccgtttaaaaaggtacctatcgtg
ggtggaaaagagctggacctcaatgctctttatatcagagtcgtttctttaggtggattt
gctaaggtttctgacaagaatcagtggtctgaacttggagaagacttcaactttccaagg
agttgttccaatgcagcatttgctttaaaacaatactaccttcgatatttagagaagtat
gaaaaggtccatcactttggtgaggatgatgaagaagtgcagccaggaaatcctaaacca
tctcttccaattggtgcaattccttgctcctacaactaccagcaacacactgtatcggac
tatctccgccaaagctatggactgtccacagagtttgcaccaacatgtgactacaacaaa
ctggtgctctctctcctgtctggacttcccaatgaagtggactttgcggtcaatgtttgc
actcttctctccaatgagagcaagcatgcaatgcaactggagaaagatcccaaactcatc
acattgttgctggcacatgcaggggtttttgatgattcattagggactttctcagctgta
tttgggatggactggaaggagaaaactacacgtaactttgtgaagttttggaaggatgtt
gtggaggatgctgaagtcagggacctcatttgggacaagggcagtcctgcacaggatggc
atgttatgggacgaacgttgcaatgctctcttccatcctcttcgtgaccttggcatcagt
gacatggaggggcagcgcgtcttgcaggtggcagtcatcctacggaacctctcatttgag
gaggcaaatgtcaaattgttggcaattaaccgcacctgcctgcgcttcctcctgctatgt
gcccactgcaacttcatctcccttcgacagttgggattggatactctgggtaacatggca
ggagagctccaattagatccagttgattttcggactacccacttaatgtttcacaccatc
accaaatgcttgatgtccagggacaggttcctcaaaatgagggccatggagatcttgggc
aacctgagcaaggttgaggataatggcatgctgatctgcgagtatgtggaccatgactct
tacaaggaggtgattggcctgctctccctgccagacctcatgctcctcatggcttccctt
gaggtactctacctactggcggagctgggagaaatcccctgcagcaagattgcttcagtg
gataggagtgtagaccttctggtgcgattagtatcagtagacctgcacacatttggaccg
gatgccctgacggcagtgaggataatggagcaccagagtgctggcagcagccagacggca
gaggtgcggccacagctggtggagcaggtgcctgcaccaatgcagggggctcccatgcct
gcagcaagagttcctgttcagtccactccacccggtattatggaacttgatggagaaaag
tttacaatacaatggatgaatgcacactttgaggccaacccggacagctctgtgtctcga
tcagacatgtactctgagtacttggccatctgtagtaagatgggacgtggtggcatcctg
acttcttctagcttcctcaaatgtctacggaccatcttcccaaaccacacagtaaagagg
caagatgaccctaagccaaactcaccggtccatatactggtcatgggggtgaggcggcgg
gcaatcccactgcccatccagttgtattaccagcagcaacccaataatgcaccaccactg
ggacatcgacatgagggccctgtcgaacagcccccctcgggcttacctcctggactccag
tttgcacagccccctatccccagccttaatgccagtggggcttctccacaggtggcctct
cccactccagaagtaccacacatggctcagacaactgttcccaggctccctcagcagcag
ctacatcacaactctctcatcatggtccagcagcaggcccactctagggatatccttaaa
tcagcaatgatgcaaagttctatcccgtcttcacctgtcattcaaaaccacttcccctct
ccacaaccgcagcagccgcatttaggccaccaatccggccccgtcctccctcctggtacc
ccggtgacgctgattcagcaagtaccacagggccacatcctctcagcgagggtgcagggc
tcatgtcctcccatggcccagcgcccacctgcacctcatacacctcccctgacagttcaa
tcaggacttcagcaggacacaactggacactcagcaactcctcactatggcccaggtgtg
tcagttccctcttcgacgctacaaaacttccagatgggaggaggtcaggtgtttaccatt
gcaggtgtacccaatacccagggttcccgggtcacttttcaaaatatagcccccaaacca
gctccatcacaggatggcggatccatgtctacaacagccactcctggccagccccagcag
tccagtgttgtcatcattaaccccaatgcgcaacacagcccaacatacaacccagctatc
caccagatcgtgcttggcaatccctctgtaatgcctggtgcccagactatccagctagca
gggcagcccggaactagttccaacccctcatccttccctcctcccacacccatcgcccag
gtccagagtcatcttcctgtcagccagatgtcatcagttaaacatcagcagcagcagata
caccctcaaccccttcctctgtctcctcagccacctcctgcccagcctacctccactgag
tccagtttgatcaaacagttactgcttccaaagcgagggccctccacaccgggagggaag
cttattctccccgcaccgcaagtaccccctcccaccagcactcgagcatcaagtccccag
gtgctgtaccagcaacctcagcagctcaatgttcaattggtgcctggctcgatccaggcc
cagggtgccctccagacagtccagcttctaccaggacaactcctctctaccagcagctca
gccacaatcatccaggccccagcacctgggggccaggtcacttttactgtggtgcccaac
acgagcttcaccacctctgcggcagccgccacggtcagccagggtgctgtcactcccggc
atgcttctaccgcaccaaacggggagtgtaacagggggaccaccaccacccctcaggggt
gacaagatcatatgccagaaagaggaggaggccaaagacgccacagggctgcacatccat
gagcgcaaaattgaagtgatggagaattcatcactggcagaagggggagctccagctgga
aaaacgagcaacggggacctggcagggaccaagctgctaaatggaaggaagtgtgtagat
tctagtttacctccgtactactcagggaacagccagggggtggttaacgggccagctagc
gaggtcttccccaccaatgggaggcagcaggacttgcaggagggacatactgaccccaaa
aagactcttgtcaatggggtttgtgaccttgatcggggggatgcctctaatgctggaacc
cactttaacagaatcattccaaatcacatcgcttccaaacacttcggaaacggggaggtg
ccctctccccagaagctgcaggatactgtccagcagcccccacctccccagcaggacact
gccaaagctgagccagtagaacgcctggccaatgggccccaaatggtgtgcaacaaaagt
tcagttgaactgtccaatgggccattggggctcaactctgctgctgtgcccacgctaagg
caacagctggttcccaatgctgcacctaccaacatcactgtcaactctcataatcctgct
gggctacggactgtgccggctaatggaggcagtgctgaaggacgggcacctaagaggccg
gcagaggatgatgaccgggacaatacaacctcaggtatccccagcaaggtgggggtacgt
attattaccatcagtgaccctaacaatgccggaagcagctccaccatggtggctgtgcct
gctggagcagacccaagcacagtagccaaagtagcattagagagcgccacacatcagaga
aactgctctcccccacaggcagccagcaccatgcctggcatgacgccatcttcaccccct
gctatacagcagactgatcagacaggcagccccacattgaactcttctatattgccacga
catgcctcaccaggtccctcagagcagatcagaaaatcaggacaaaacttcaagtgtctg
tggcaatcatgtaaacggtggtttgagactccatcacaagttttctaccatgcagctacc
cagcatggcggtaaggacatgtatggtggccagtgcctatgggaaggatgtgaacccttt
ccacggcagagactgtctttcataacccacttgcaggataagcactgttctcgggatgcc
ttgttagcagcaatgaaaatggaggaacagaaacagggcatcaatcagacaacttccaag
cctcagtcagtagcatgcagcactccaacaccgcgagctcagaaagctatagtcaatcat
ccgagtgcagctcttatggccctgcgcaggggttctagaaacctggtgttcagagacttc
actgatgaaaaagagggaccaatgacaaaacacataagactaactgctgccttaactcta
aagaacatcgcaaagtattcagattgtggtcggaagttagtaaagaggcatgagaatcac
ctctctgtgctggcactcagtaacatggaggtctccaccacgctcgccaaatgcctttac
gaactgacgcgctcgctgcaggcttga
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integrated database retrieval system
