Osmerus eperlanus (European smelt): 134037594
Help
Entry
134037594 CDS
T10927
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
Contactins
134037594 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oep00537
]
Others
134037594 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134037594
NCBI-ProteinID:
XP_062338963
LinkDB
All DBs
Position
17:3005432..3021513
Genome browser
AA seq
1040 aa
AA seq
DB search
MASNGLVLLILSSSFSLSEAFLFGDPRIYGDDATGYGPVFEEEPLDIVYTEDSPDGRISM
NCRARANPPATYRWRRDKWEIKLMEQPDEHYSLVGGNLVITNPKQKKHAGTYVCVAKNIY
GTVISKEATIKFGYMDAFPEEERDPVLVKEGQGAVLLCAPPKRWPYEVTFRWIYNEFPVF
LQPDRRRFVSQSTGNLYISKVEAQDAGNYSCFVSSPIIGKSVFSKFIPLIPSADEYPTER
KFPADLRVTFPDTTAMLASNITLECFALGNPIPHILWRKVGATDLPAGHEISMSGALLHL
YNVQYEDAGKYECEAINSKGKDWHHNWLYVQSAPEWAQTINNTQKDIGSEHTMGCVAMGK
PFPYIRWLKDGFTIGKGELKFSSLTFDDSGMYQCIAENYWGTIYANAELRVIACPPSFEF
NPVRRQLLGARDGRVVIECKPRAAPRPQFSWRKDKELLFNNSRISILFDGSLEILNATRN
DEGVYTCFAENNRGKANSTGTLTITEATSITVAPEDAVVEVGGEVVLSCSASYDPMLDVT
FIWAIDYRVIDFNAERRDFERIMGAEDSGDMKIMNIQVNHAGRYICTAQTVVDNATAYAD
VKVIGRPGPPGVVVVEEIGDKSVKLTWSKGADHHSPILHYTIQTRDFWALDFEDWRTAST
SPTILGASAESADVTDLFPWMEYEFRIYATNEYGDGEASVPSIKIKTWDAAPVVAPANIG
GFGGRDGELILTWEPIQPWYFSGKKFGYVVAFKPHDAYDWWYETISDPETRRYVHRDPSF
EVTEEDFQVREFQVKIKSFNSKGDGPYSLTTVIYYPRDVPTESPTDVYSRPVSCTEALVW
WLPVMDTGTGLTQYIDGYQVKYWRKYDDTESGANRILVPGNANNTRLENMRPDSHYLIEV
RAYNGAGFGPPSEHCEMFTRRPPPSVAPRVWRYISWTGKWLYVWWDHIEYDWFGNISFPL
YYKVMFRKTGYITGPIYITGWHFMDFPMPQVGDFELEVRGRYEGGDGPSRMIRIRGKASV
TTPSLSLASLLLLALCIVGF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaatggacttgttctcctgattctctcctcctcgttctccctctcagaagcg
tttctgttcggtgaccctagaatctacggagacgatgccactggctatggacctgtgttt
gaggaggagcctctggacattgtgtacacagaggactcccctgatggaaggatctccatg
aactgtagagcaagggccaaccctccggctacatacaggtggcgccgtgataagtgggag
atcaagctgatggagcagcctgacgagcactacagtctggtggggggaaacctggtcatc
accaaccccaagcagaagaagcacgcaggaacgtacgtgtgcgtggccaagaacatctac
ggaaccgtcatcagcaaagaggccacgatcaagttcggatatatggatgcattcccggag
gaggagagggaccctgtgttggtcaaggagggccaaggagccgtgctgctttgtgcccct
cctaaacgctggccatacgaggtgacgttccggtggatctacaacgagttcccggtgttc
ctgcagccggaccgccggcgcttcgtgtcccagagcacggggaacctctacatctccaag
gtggaggcccaggacgcagggaactactcctgcttcgtctccagccccatcatcggcaag
agtgtcttctccaagttcatccccctcatcccctccgctgacgaatatcccacagagagg
aagttcccagctgacctccgggtgaccttccctgacaccacagccatgctggcctccaac
atcacgctggagtgcttcgctcttggcaaccccattccccacatcctgtggagaaaggtg
ggcgccacagacctgccagcaggccacgagatcagcatgtccggagcgctgctgcatctc
tacaacgtccagtacgaagacgccggcaagtacgagtgtgaggccatcaactccaaagga
aaagactggcaccacaactggctctacgtacagtccgctcctgagtgggcccagaccatc
aacaacacccaaaaggacattgggtcggagcacaccatgggttgtgtggccatgggcaag
cccttcccctacatccgctggctcaaggacggattcacgattggaaaaggcgagctgaag
ttctccagtctgacctttgatgactcagggatgtaccagtgcatcgccgagaactactgg
ggaaccatctacgccaacgcagagctgcgtgtgatcgcctgccccccctcgttcgagttc
aaccccgttaggaggcagctcctgggagccagagatggacgcgtggtgatcgagtgcaaa
ccccgcgccgcccccagaccccagttcagctggagaaaggacaaggagctgctcttcaat
aactcacggatctctatcttgttcgacggcagtctggagatcctaaatgccacgaggaac
gacgagggtgtgtacacgtgcttcgctgagaacaaccgcggcaaggccaacagcactggc
accctcaccatcacagaggcgaccagtatcacagtagccccagaggatgccgtggtggag
gttgggggggaggtggtcctgagctgctccgcctcctacgaccccatgctggacgtgacg
ttcatctgggccatcgactatcgcgtcatcgacttcaacgcagagagacgcgactttgaa
cgcatcatgggtgctgaggacagcggggatatgaaaatcatgaacattcaggtgaatcac
gcgggacgctacatctgcacagcccagactgtggtggacaatgccaccgcctatgccgac
gtcaaggtcatagggcgcccaggccccccaggtgtggtggtcgtggaggagatcggggac
aagtcagtaaagctgacgtggagtaagggagcggaccaccacagccccatcctgcactac
accatccagaccagggacttctgggctctggactttgaggactggaggacagccagcacc
tcccccaccatcctgggcgcgtctgccgagagcgctgacgtgacggacctgttcccctgg
atggaatacgagttcaggatctacgccaccaacgagtacggagacggagaggcctccgtc
ccctccatcaagatcaagacctgggacgcagctcctgtggtggctcctgcaaacatcgga
ggctttggagggagagacggagaactgatcctcacctgggagcccatacagccctggtac
ttctcgggtaagaagtttggctacgtggtggctttcaaacctcacgacgcctacgactgg
tggtacgagaccatctccgaccccgagacgcggcgctatgtccaccgcgaccccagcttc
gaggttaccgaggaagacttccaggtcagggagttccaggtcaagatcaagtccttcaac
agcaaaggtgacgggccgtacagcctgaccacagtcatctactacccacgagacgttcct
acagagtctcctacagatgtctactccaggccagtctcgtgtacagaagctctggtttgg
tggctacctgtcatggatacgggcaccggcctcacccagtacatagacggctaccaggtg
aagtactggaggaagtatgatgacacagaatcaggagccaatcggatccttgttcccggg
aatgccaacaacacgcgtctggagaacatgcgtccagattcccactacctcatcgaagtg
cgggcctacaatggagctggctttggcccccccagcgaacactgcgagatgttcaccagg
agacctccccccagtgtggcccccagagtgtggcgctacatcagctggacaggaaagtgg
ctgtatgtgtggtgggaccatattgagtacgactggtttggaaacatctccttccctctc
tactacaaagtgatgttcaggaagacgggctacatcaccgggcctatctacatcacaggc
tggcacttcatggacttccccatgccccaggtgggcgactttgagctggaggtcagaggt
cgctacgagggcggagatgggccctccaggatgatccgcatcaggggtaaggcgtcggtg
accacgccctcgctcagcctggcttccttgctgctcctggccctgtgcattgtgggattt
tag
DBGET
integrated database retrieval system