Osmerus eperlanus (European smelt): 134037606
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Entry
134037606 CDS
T10927
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
134037606 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134037606 (cald1a)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
134037606 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
134037606
NCBI-ProteinID:
XP_062338986
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Position
17:2887266..2923801
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AA seq
648 aa
AA seq
DB search
MDDDFERRRELRRQKREEMRLEAERVAYQRNDEDEEEAARERRRRARQERMKSREGEEPS
GQTDTLAITNSHSVTESSGGGGEGGGDDEEQALMERMAKREERRQRRLKEAQERQQGTDA
RDNDRDHGDAAANSAEEERPLGRRGRYHDNEEEEEQGRKTTVARGREEEEKEEEEEEEEE
EEAAPEEEEKEEVEEDKPSRSYMREQESCEEKTNMSHMQNEDQQQQLNSNSVLEQIPDQH
ESDEEQAGGGEEDEGIDKEEEEEEGIEKEEEEEEGIEKEEEEEEEERLQEVGEKREGRIR
AREQEEDCERAENGVGLVSQRGGAREQGEWQRKQNGGLHEETPPMQNRKPERTLSRGSMR
APEPGVGEDPDDAARQEAERKLEELKRRRDDAEVEEFERMRQKQQEAEQELEELKKKREE
RRKVLEQEDRQKKQEEEERKAREEEEKRRMKEEIERRRAEAAEKRQKVEDTMEGGEAKPF
KCVSPRGSSLKIGERAEFLNKSAQKSSLKLAHSPVVSKIGNRLEQYTSAAQRENKDSRSP
RSGAVDLPMVTDGIRNIKSMWEKGNVFTSPGGAGGTFKEAAGMKIGVAGRINDWLNKTPE
SKTPGGRPADLKPGDVTNKRSLWENKGASPTKVTGRGEAKSVTNGMGH
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactttgagcgccgccgtgagctgaggaggcagaagagggaggagatgagg
ctggaggccgaacgagtggcctaccagaggaacgatgaggatgaggaggaggcggcccgg
gagaggcgacgcagggcgcgccaggagaggatgaagagcagggagggggaggagcctagc
gggcaaacagacaccttggccataaccaacagccacagcgtgacggagagttccggagga
ggaggagaaggaggcggagatgacgaggagcaggctttgatggagcgcatggccaagagg
gaggagcgacgccagcgacgcctgaaggaggcgcaggagagacagcaggggacggacgcc
cgcgacaacgaccgggaccacggcgacgccgcggccaacagcgcggaggaggagaggccg
ctcggccgcagggggcgttaccacgacaacgaagaggaggaagagcaggggaggaagacg
acggtggcgcgtggcagagaggaggaggagaaggaggaggaggaggaggaggaggaggag
gaggaggctgccccagaggaagaggagaaagaggaagtggaggaggacaagcccagcagg
tcttacatgagagagcaggagtcctgtgaggagaaaactaacatgtcacacatgcaaaac
gaggaccaacaacaacagctcaactctaactcagtattagaacagatcccagatcagcat
gagtcagatgaggagcaggcaggaggaggagaggaggatgaggggatagacaaggaggaa
gaggaggaggaggggatagagaaggaagaagaagaggaggaggggatagagaaggaggaa
gaggaggaggaggaggagagactgcaggaagtgggagagaagagggagggcaggatacga
gccagagagcaggaggaggactgtgagagagcagagaatggcgtgggcctggtgtcccag
aggggcggggccagggagcagggggagtggcagaggaagcagaacggaggcctgcatgag
gagactccgcccatgcagaacaggaaaccagagagaaccctcagtcgcggcagcatgcgc
gcccccgagccgggggtgggggaggatccggacgacgcagcgcgccaggaggcggagcgc
aagctggaggagctgaagcgtcgccgtgacgacgcggaggtggaggagtttgagaggatg
aggcagaagcagcaggaggcggagcaggagctggaggagctgaagaagaagagggaggag
aggaggaaggtgctggagcaggaggacaggcagaagaagcaggaggaggaggagagaaag
gcacgggaggaggaagagaagaggaggatgaaggaggagatcgagaggaggagagcagag
gcagcggagaagaggcagaaggtggaggacacgatggagggaggagaggccaagcccttc
aagtgtgtcagtcccagagggtcgtctctcaagatcggtgagagggcagagttcctgaac
aagtcggctcagaaaagctctctgaagctggcccactcccctgtggtgtctaagatcggc
aacaggctggagcagtacacctcagcagcccaaagggagaacaaggactctcgctccccg
cgctccggggcggtggacctgcccatggtcacagacggcatccgcaacatcaagagcatg
tgggagaagggcaacgtgttcacctcccctggaggggcagggggaaccttcaaggaagca
gctgggatgaagataggcgtggccggccgcatcaacgactggctgaacaaaacccctgag
agcaagaccccaggaggcaggccagcggacctaaagccaggtgatgtcaccaacaaacgg
agtctatgggaaaacaaaggagcctctcctaccaaggtgacaggccgaggggaggctaaa
tcagtcaccaacggcatgggacactaa
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