Osmerus eperlanus (European smelt): 134037728
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Entry
134037728 CDS
T10927
Symbol
smo
Name
(RefSeq) protein smoothened
KO
K06226
smoothened
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134037728 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oep04030
]
134037728 (smo)
G protein-coupled receptors [BR:
oep04030
]
Frizzled / Smoothened family
134037728 (smo)
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GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
SYF2
Motif
Other DBs
NCBI-GeneID:
134037728
NCBI-ProteinID:
XP_062339203
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Position
17:complement(2143816..2152103)
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AA seq
831 aa
AA seq
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MSPFSACTIVGAFGVLSIWAACSFVTHAAMVQKNATLMLDEHCKKTTTCEVLKYNTCLGS
PLPYTHTSLILAEDSNTQEEAFEKLAMWSGLRNAPRCWSVIQPLLCAVYMPKCDNGHVEL
PSQQLCQATRRPCSIVDQERGWPGFLKCDTKDKFPMGCKNEAVTKLKFNSSGQCEAPLVK
TDIQASWYKDVEGCGIQCHNPLFTEEEHSDMHAYIAYFGSITLLCTFFTLATFLADWKNS
NRYPAVILFYINACFFVGSMGWLAQFMEGAREEIVCKSDKTMRLGEPSSTETLSCVTIFI
IVYYSLMSGVIWFVMLTYAWHASFKALGTTHQPLSGRTSYFHMITWSIPFILTVAILAIA
EVDGDSVSGICFVGYKNYHYRAGFVLAPIGVVLVIGGYFLIRGVMTLFSIKSNHPGLLSE
KAASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFSQAEWERSFREYVLCEANVTIAHQ
TNKPIPECTIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKIIGRSDDE
PKRIKKSKMIAKAFSKRKELHKDPEKELSFSLHTVSHEGPVAGINFDLNEPSNDMSSAWA
QHVTKMVARRGAILPQDISVTPSCTPVPPPDERKKLWMVEAEISPEMMKRKRKKRKRKKE
ERPAEEAANHQGYRRREFGPSSVPRLPKLPGHRSLVTNLWEQQQEVGADILPGSYPESRP
SHPLPYQERYTSLAPYPSSRRSRNHDLALLSNPHALNDLPEDLGLGPRCPVPHSRQPSVG
SRYPGEVEPVGGGWGRAAYTMRPQGRKARIDPIHSQTNLMEAELMDADSDF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccttcagcgcttgcaccattgttggagcgttcggggtacttagcatttgggca
gcctgctcatttgttactcatgcggccatggtacagaaaaacgcaacactaatgttggat
gaacactgtaaaaaaacaactacttgcgaagtgctcaaatacaatacatgtctggggtcc
ccattaccgtacactcacacgtcgcttatcctggcggaggactcaaacactcaagaagaa
gcatttgagaagttggccatgtggtcgggtctgcgtaacgcccctcgctgctggtcggtg
atccagcccctgctctgtgccgtctacatgcccaagtgtgacaacgggcacgtggagctg
cccagccagcagctgtgccaggccacccggcgcccctgcagcatcgtggaccaggagagg
ggctggcccggcttcctcaagtgcgataccaaggacaagtttcccatgggttgcaagaat
gaggcagtgacgaaattaaagttcaactcatcaggccagtgtgaggcccccctggtgaag
acggatatccaggccagctggtataaggacgtggagggctgtggcatccagtgtcacaac
cctctcttcaccgaggaggagcactcggacatgcacgcctacatcgcttacttcggctcc
attacgctcctctgcaccttcttcacactggccacatttctggcagactggaagaactcg
aatcgctatccagccgtcatcctcttctacatcaacgcttgtttcttcgtgggaagtatg
ggctggctagctcagttcatggagggtgctcgtgaggagatcgtctgcaagagtgacaag
accatgcgcctcggggagccctcgtctacggagactctgtcctgcgtcaccatcttcatc
atcgtctactattccctgatgtcgggcgtgatctggtttgtcatgctgacctacgcctgg
cacgcttccttcaaggccctgggcaccacccaccagcctctgtctggacgcacgtcctac
ttccacatgatcacctggtccattcccttcatactcaccgtggccattctcgccatcgct
gaggtggatggagactctgtgagtgggatctgttttgtgggctataagaactaccactac
cgggccgggtttgtgttggcacccatcggagtggtgcttgttatcggcggctacttcctc
atacgaggagtcatgactttgttttccatcaagagtaatcaccctgggcttctgagcgaa
aaggctgcgagcaaaatcaacgagacaatgctaaggcttggtatttttggattcttggcg
ttcggctttgtgttcatcactttcggctgccatttctacgacttcttcagccaagccgag
tgggagagaagcttcagagaatacgttttgtgcgaagccaacgtcacaatagctcatcag
accaacaagccgattccagaatgcaccatcaagaaccgacccagtctgctggtggagaag
atcaatctgttctccatgtttgggactggtattgccatgagtacctgggtttggaccaag
gctaccatcctcatctggaaacgcacctggtgcaaaatcattggccgtagtgacgacgaa
cctaagaggataaagaagagcaagatgatcgcgaaagccttctccaaacgcaaagagctc
cacaaggaccctgagaaggagctgtccttcagcctgcacaccgtctcccacgaggggcct
gttgctggcattaactttgacctcaacgagccgtccaacgacatgtcgtctgcctgggcc
cagcatgtcactaagatggtggccaggagaggtgccatcttgcctcaggacatctctgtc
acgcccagttgcacacctgttccgccccctgacgagaggaagaagctgtggatggtggag
gcggagatctctccggagatgatgaagaggaagaggaagaagaggaagaggaagaaggag
gagaggcccgcggaggaagcggccaaccaccaggggtaccggcggagggagttcggcccc
agctcagtgcctcgcctgcccaagctgccagggcacaggagcctggtgaccaacttgtgg
gaacagcaacaggaagtaggggctgacatccttccagggtcttaccccgagtccaggccc
tcgcaccccctcccctatcaggagaggtacacaagcctggccccgtacccctccagccgg
cgtagcaggaaccatgacctcgccctgctctctaacccccacgccctgaatgacctaccg
gaggatcttggtttagggcctcgctgccctgtaccccactcccggcagcccagcgttggc
tctcgttacccaggggaggtagagccagtgggtggggggtgggggagggcagcttacacc
atgagaccacaggggaggaaggcaaggattgatccgattcactcgcagaccaatctgatg
gaagcggagcttatggatgcagactctgacttttga
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