Osmerus eperlanus (European smelt): 134037806
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Entry
134037806 CDS
T10927
Symbol
plxnc1
Name
(RefSeq) plexin-C1
KO
K06572
plexin C
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oep04090
]
134037806 (plxnc1)
CD molecules [BR:
oep04090
]
Proteins
134037806 (plxnc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
PSI
TIG
TadB_TadC_N
DUF5392
Motif
Other DBs
NCBI-GeneID:
134037806
NCBI-ProteinID:
XP_062339310
LinkDB
All DBs
Position
17:2153923..2170365
Genome browser
AA seq
1498 aa
AA seq
DB search
MWSIIFLGSLVVLVDLGRGQDITFDGYIRDFAVGNSSLYALTDDYLYKVSHNLAQITDKI
SQRGILNRPDGKFERSTGSSPVWNATYKVNMLVPFIKNNTLITCGSIICGYCEVLDINDI
SKSVHYEHLEVSPNGSAIGFVVDIETKNKLETYVFAASMMSTKTVCPPANSVVTLRNTND
KQTGEIFSDIDQDQSPAKITTEDRSFNFVDGFQNDKYIYLFRNHRNGFVSVQLIWLEVKT
NKKDTIGSLQGAKLQCCADQDRSLLLSSSLIPGGPPVLWAGVFTRNDTSDPVNTVLAIYD
ISPGKGPDPIFCSNQLCKPKSEPEIIRLHPKSVVFQYKSMTSVLALRQGSWVVFFIGTGD
GQLIKLAVDKNYNSSCPRVLFRSDNDVQVFPRMHLDPVDPRHIYMVLGNQMKRVPVATCG
LYVSSKDCWSSEDPFCGWCESKRSCTFKEDCSNSTWISIPDESKQQQISHQLQRSSTGQI
NLTIQVHLSVVGPIPAFACNLVPGKALCYPLFLTCTCLLSRDMLSILGMFVKVRLGSEQL
KKELKLVNCSGITGPPTFDLCSRCVSAGCSWRNQNCSWTPHPAHTHLTQEPVCQMDQPGL
DSQPEIFSIEPEEVSFHGWNHALLTGNNLSHVTRVRIQGRFDCSPKESPVWRNTGSNLTF
HIPGGEKGLVRVCLVLSDGSCHGTGHVTYISSPSCSELTPSTTWESGGRSIRARGIYLGL
VEGVVHGNSPHVTATNYSAGDLLFYTPPMDHSELPINVTLKVANHSVFCRPLTFQPDPKF
ISFTHTATGNHLRVTIQKKADKLNISKSELTVLAVEDEKEYECVLEIIETSNGTDSIDCD
ILNKPNAKIDFLRIKYGGVEIRLQSQQQSGARLALLIVPVLVVILLIVLGVVCVYRNKQI
KLTAKMNERLELLESDIRQEIRQGFVDLQTDHSDLIENVGAIPFLDYKHFASRIFFPEGG
PVATSIVKDIGQDAVKVRLEQSCQALSTLIQDQLFLTSMVHALEEQKNFNIKDKCTVASL
LTVALHGDLQYLTNVMEDLLRALMDQPSNNQPKLLLRRTESIVEKLLTNWMSICLYGFLR
ESVGQHLFLLVSALTQQISKGPVDSVTEKALYTLNEDWLLYQAPDFTPLKLKVLFAVGTE
GEVSDPLEVAALSCDTVEQVKEKILVAHKNKFGFPYSSPLRDIHIEYERDGRFVPLQEVD
SSSEVLGDVTMLNTLRHYQVSDGMTIKVLSRRTHPPLSPQDSLKDDLNFSAKYFHLIDPE
VDQDQRKNPERKKLKLKEVHLTKLLSTKVAVHSFVENLFRTIWGTTNGNAPCVVKYFFDF
LDVQAESKRILDPDVTHIWKTNSLPLRFWVNILKNPQFVFDMEKSSHLDSCLSVIAQAFM
DSFSLSEMQLGKHAATNKLLYAKDIPLYKQEVKAYYKQVKDQPKMTSSEFKDFLLEESKK
HENEFNESEALRELYKYMQRYFDDIKLKLEQNGAPAELQQQLQSVKVLFDSLKSSSWD
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctattatatttttagggtccctggttgtccttgtggatttgggtcgtggtcag
gacatcacctttgatgggtacattcgtgactttgctgttggcaacagctcactctacgcc
ctaacggatgactatctctacaaggtgagccacaatttggctcaaattaccgacaagata
tctcagagaggaatacttaataggcctgacggcaaatttgagagaagcactggaagtagt
cctgtttggaacgcaacttacaaggtgaacatgttggtgccattcatcaaaaataacacc
ttaatcacctgtggaagtatcatatgcgggtactgtgaagtgttagatatcaacgacatt
tccaagtctgtgcattacgagcatcttgaagttagcccaaacggctcggccattggattt
gtggtcgatattgagacaaaaaataaattagagacgtatgtctttgcagcgagtatgatg
tcaaccaaaacggtgtgtcctcctgctaattctgtggttaccttgagaaacactaacgat
aaacagactggagagatattctctgatattgaccaagaccagtcacctgcaaaaattacc
accgaggatagaagtttcaattttgttgacggctttcagaatgataaatatatatatttg
ttccgaaaccatcggaacggtttcgtgtcagtacaacttatttggctcgaggtcaagaca
aacaagaaggatactattggatctctgcaaggtgcgaagcttcagtgctgcgcggaccaa
gatcgctcgctactactctcatcctccttgattcctggcggtccaccagtgctctgggcc
ggtgttttcacgaggaatgacacgagcgatcccgtgaataccgtgcttgccatttatgac
atcagtccgggtaaaggacccgacccgatcttctgcagtaaccagctttgcaagccaaaa
tccgaacccgagatcatcaggctgcatccaaagtctgtggtgtttcagtacaagtccatg
acctcggtcctggcattgagacagggctcctgggtggtgttcttcatcgggacaggagac
ggtcaactcatcaagcttgctgtggacaagaactacaattcctcctgtcccagagttctg
ttcaggtcagacaatgatgtccaagtgtttcccaggatgcacctggacccagtggacccc
agacacatctacatggttctagggaatcagatgaagcgtgtccctgtggctacatgtggt
ctttacgtctcttctaaagactgctggtcttccgaggacccattctgtggctggtgtgag
tctaagagaagctgcacatttaaggaggactgctcgaattccacatggatctccattcct
gatgagtccaagcagcagcagatctctcaccagctgcagagaagcagcactggacagata
aaccttaccatccaggtccatctcagtgtagtagggccaatacctgcatttgcctgtaac
cttgtcccaggaaaagcgttatgttacccattattcctcacttgcacctgcctgctctcc
agggacatgctatctatcctaggtatgtttgtgaaggtcagactggggagcgaacagctg
aagaaggaactgaagctggttaactgttcaggcatcacaggaccccccacgttcgacctg
tgttccaggtgtgtatcagccggctgtagctggaggaaccagaactgctcctggacacca
catccagcgcacacacacctcacacaggagccggtgtgccagatggatcagccagggctg
gactctcagccagagatcttctctatcgagcccgaggaggtgtccttccatggctggaac
cacgccctcctgacaggaaataacctcagtcacgtgaccagagttcgcatccagggacgc
ttcgactgctctccgaaggagtccccagtgtggagaaatactggatctaatctgacgttt
cacatacctggtggagaaaaaggcttggtcagggtgtgtctggtactttctgatggcagc
tgtcatggaactggtcatgtgacttacatttcctcaccttcctgctccgaactgacgcct
tccaccacttgggaaagtggggggcgcagcatcagggctcgaggtatatacctgggctta
gtggagggcgtcgtccatggcaactcccctcatgtcacggcaaccaactacagcgcgggg
gatttgttgttctacacaccacccatggaccattccgagttgcccatcaacgtcactttg
aaagtagccaatcacagtgtgttctgccgtccactcacgttccagccggacccaaagttt
atcagcttcacccacacagccacaggaaaccacctgcgggtcaccatccagaaaaaggca
gacaagctgaacatctccaagtcagagctgaccgtgctggcggtggaggatgagaaggaa
tacgagtgcgtcctggaaatcatagagaccagcaacgggaccgactccatcgactgcgat
atcctgaacaaacccaacgcaaagatagactttctacggataaagtatggaggtgtcgaa
atccgtttgcagtcacaacagcaaagcggggctcgtctggcactgctgattgtacctgtc
cttgttgtgatactattaatcgttttaggagtggtgtgtgtttatcggaacaagcagata
aaactaacagccaagatgaacgaacgtttggagttgttggaaagtgacatcagacaggaa
attagacaaggttttgtggacctgcagaccgatcattcagatttaatagaaaacgtgggt
gccattccattccttgactacaagcactttgcttccagaatcttcttccctgagggtgga
cctgtcgcaacatcgattgtcaaagatattggtcaggacgcggtgaaggtgcgtctggaa
cagagctgccaggccctgtctactctcatccaagaccagctcttcctcacctccatggtc
cacgctctggaggagcagaagaacttcaacatcaaagacaagtgtacggtagcatccttg
ctgactgtggccctgcatggtgaccttcagtacctgaccaatgtgatggaggatctcctc
agagccctgatggaccagcccagtaacaaccagcccaaactactgctgcggcgcaccgag
tccatagtggagaaactcctaaccaactggatgtctatctgtctctatggcttcctcagg
gagagtgttggccagcacctgttcctcctggtcagtgctctgacccagcagatatccaag
ggacccgtggactcagtcacggagaaggctctgtacacgctcaacgaggactggctgctg
taccaggccccggacttcactcctctgaagctgaaggtgctgtttgcagtgggcacagag
ggtgaggtgagtgaccccttggaggtagcagctctgtcctgtgacacagtggagcaggtc
aaggagaagatactcgtggcccacaagaacaagtttgggttcccctacagctcgccactc
agggacatccacatagagtacgagcgggacggcaggtttgtgcctctccaggaggtggac
tcctcctctgaggtcttgggagacgtgaccatgctcaacacactcaggcactatcaggta
tcagatggaatgactatcaaggtgctctctcggaggacccacccccctctgagcccgcag
gacagcctgaaagatgatctgaacttctctgcaaagtactttcatctaattgacccagag
gtcgaccaggaccagaggaaaaacccagagagaaagaagctgaagttaaaggaagtacac
ctcaccaaactgctgtccaccaaggtggccgtgcattcgttcgtagagaacctcttcaga
accatctggggaacgaccaatgggaacgcaccgtgtgttgtcaaatacttctttgacttc
ctggatgtgcaggcggagagcaagaggatcttggaccccgatgtgacacacatctggaag
accaacagcctgccccttcgtttctgggtgaacatcttgaagaacccccagtttgtgttc
gacatggagaaatcttcccacctggacagctgcctgtctgttatcgcccaggccttcatg
gactccttctctctcagcgagatgcaactaggcaagcatgctgcaaccaataaactgctg
tatgccaaagacatcccactttacaaacaggaagtaaaggcctattacaagcaagtcaaa
gaccagcctaaaatgacaagctctgaattcaaggatttcctgcttgaggaatcaaagaaa
cacgaaaatgagttcaatgaatctgaagccctccgggaactctacaaatacatgcagaga
tactttgacgatatcaagctgaagctcgagcagaatggtgcccctgccgaactccagcag
cagctgcagagcgtcaaagtcctgtttgattccctgaagagcagttcctgggactga
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