Osmerus eperlanus (European smelt): 134037819
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Entry
134037819 CDS
T10927
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134037819 (prdm4)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134037819 (prdm4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
SET
NOA36
Zf-C2H2_ZNF451
zf-H2C2_5
BSP_II
zf-C2H2_16
zf-C2HE
DUF5810
DUF7479
Motif
Other DBs
NCBI-GeneID:
134037819
NCBI-ProteinID:
XP_062339332
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All DBs
Position
17:7170981..7176233
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AA seq
849 aa
AA seq
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MNDMNLSPVGMDQLSVPSVSASHMGLPTSPTHNHNHNPIPTPGMPVAIPSLGPSLGSLPS
ALSLMLPHAGVMCGLPERNYSLPPPPYPHLESSYFRHILPGILSYLADRPPPQYIHPSSL
NMDGTLAVPSNNPPGMDHYSGPGGPLEQGLVSLDSRQVGGQGDLHSGGNHEVQLDSSGLA
MESQVSSPMSPDRMREELASMEGVGVVAENQQQLGGRSQNHEGLGGVDSSGSVMPLHGPA
GLELSVVMEPEHLGGRVGNAGGGGGGGLGEALHTSGELNSGVVSVVLSGSMAPQSQLEPV
SLHGHTGMGLDQVNVSPITAEVSLGPENSLVLVNSTLQLEDSTSNKENMVTAFTIWCTLC
ERSYPSDCPEHGPVTFIPDTPIQSRARLSLPRPLCLRISVAGEPLGVFARDIIPPRTCFG
PMVGQHCSNVDLSDWPDKDTPQIWKMFHNNVLEFCIVTTDENECNWMMFVRKARTSEEQN
LVAYPDNGKLFFCTSTEILPDQELLFYYTRDYCRQMVVSQVPEGQVCQCGKECSSFAELK
SHLNSHNSHSHPHAHSPSQDHSQQQQQQQHHAHQEEKLANGTSSSSSSPWPCHSHNNSLS
GTNTNTAGHGHARERRFKCSVCSRAFTTTTKLNVHFMGHVGMKPHKCEYCSKAFSDPSNL
RMHLRIHTGQKNYRCTVCEKSFTQKSHVASHMVIHTGAKKMNCELCDRTFIRKHDLKQHM
FTHTQERQIQCPKCDKHFLNTNHLKKHMNSHEGRRDYICEKCHKAFLTKYHLTRHLKICK
GPKTDRGPRQDEEGEEEEEEEEEEEEEEEEEENDSGGGGVERLIDPTSSEDCALEVTGYA
SEKSLSPHH
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaacctcagtccagtgggcatggaccagcttagtgtgccctctgtgagt
gccagccacatgggtctgcccacatccccgacccacaatcacaaccacaacccaataccc
acaccaggcatgccggtggccatacccagccttggtccttctctagggtccttgccatca
gccttgtccctcatgcttccgcatgcaggggtgatgtgtggcctccctgagaggaactac
tctctgcctcctccaccctacccgcacctggagagcagctacttcagacacatactacct
ggtatcctgtcctacctggctgaccgtccacctccccagtacatccaccctagcagcctc
aacatggatgggactctggccgtgcccagtaacaaccccccaggcatggaccactacagt
gggccggggggtcccctagagcagggtctggtgtccctggactccagacaggtggggggt
cagggggaccttcactcgggcggcaaccacgaggtgcagctggactcaagtggactagcc
atggagtcacaagtcagcagccccatgtcccctgaccgcatgagggaggagctggcctct
atggagggggtaggggtggtggctgagaaccagcagcagcttggggggaggtctcagaac
cacgaaggcctgggtggggtggactcttctgggagtgtgatgcctctgcatggacccgct
gggctggagctgtcggtggtgatggaacctgaacacctggggggtcgggtagggaacgca
gggggaggaggaggagggggcctgggggaggccctccatacgtcgggtgagctgaactcc
ggggtggtcagtgtggtcctgtcaggctccatggctccccaatcccagctggagcccgta
tccctgcatgggcacactgggatgggcctggaccaggtaaacgtgtcccccatcacagcc
gaggtgtccctggggccagagaacagcttggtgctggtcaactccaccctgcagctggag
gactcaacgtccaacaaggagaacatggtcaccgccttcaccatctggtgtactctgtgt
gaacgctcctatccctccgactgcccagaacacggtccggtcaccttcatccctgacacg
cccatccagagccgagcccgtctctccctgccccggcccctctgcctccgcatctccgta
gctggcgagcctttgggtgtgtttgcgcgagacatcattccccccaggacctgcttcggg
ccaatggttgggcagcactgtagcaatgtcgacctttctgattggccggacaaggacaca
ccacagatatggaagatgttccacaacaacgttttggagttctgcattgtgaccacagat
gagaacgaatgcaactggatgatgtttgtccgaaaggcaaggaccagtgaggagcagaac
ctggtggcctaccctgacaacggcaagctgttcttctgcacctccaccgagatcctgcct
gaccaggaactgctcttctactacaccagagactactgcaggcagatggttgtctcccag
gtgcctgagggtcaagtctgtcagtgtgggaaagaatgctcctccttcgctgaactcaag
tctcacctaaacagccataacagccacagccacccccatgcccacagcccctctcaggac
cactcgcagcaacagcagcagcagcagcaccacgcccaccaggaagagaaactggccaat
gggacctccagctcctcctcttccccctggccctgccactctcataacaacagcctctcc
ggcaccaacacgaacactgccggtcacggccacgcgagggagaggaggtttaagtgcagt
gtgtgctccagggccttcaccaccaccaccaagctcaacgtccacttcatgggtcacgtg
gggatgaagccacacaagtgtgaatactgcagcaaggccttcagtgaccccagtaacctg
cgcatgcacctcaggatccacacaggtcagaagaactacaggtgtacggtgtgtgagaag
tccttcacccagaagtcccacgtggcgtctcacatggtgatccacacaggggccaagaag
atgaactgcgaactctgtgacaggacgttcatcaggaagcacgacctcaagcagcacatg
ttcacacacactcaggagcgccagatccagtgtccgaagtgtgacaaacacttcctgaac
accaaccacctgaagaagcacatgaactctcacgagggcaggcgggactacatctgtgag
aagtgtcacaaggccttcctcaccaagtaccacctcacacgccacctcaagatctgtaag
ggccccaaaacggacaggggtccccggcaggatgaggagggggaggaagaagaggaggag
gaggaggaagaggaggaggaggaggaagaggaggagaacgatagtggaggtggaggagtg
gaaagacttatcgatccaacaagcagcgaggactgtgctttagaagtaactggttatgct
tctgaaaaatccttatcacctcatcattga
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