Osmerus eperlanus (European smelt): 134037911
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Entry
134037911 CDS
T10927
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oep03009
]
134037911 (utp20)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134037911 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT
Motif
Other DBs
NCBI-GeneID:
134037911
NCBI-ProteinID:
XP_062339462
LinkDB
All DBs
Position
17:complement(7257576..7275736)
Genome browser
AA seq
2818 aa
AA seq
DB search
MKIKSKSSYHKSENTFRFLTFAERLANVNIDVIHRIDRTGSYEEDVETYFSEGLTKWRDL
NLTENFTTFLKEVSNKCQSFNLLVFHQNAIVESLKTHLAVKKSLAFQPLLELVVQLARDL
QTDFYPHFPAFFPLITSLLETQDTELLEWAFTCLSYLFKYLWRLMVKDITNMYSLYSTLL
AHKKEHIRRFAAESFSFLMRKVPDLDGLLSHMFSDLGEHPEKAEGAGQLLFEMCKGVRNM
FHSCAAKALPVALKKLGPAGNHDDASLNWEAVRDAVDQMARAAANHVEKEHILVLWESIQ
ACVSEVLAQLEEEREKARETSPVLEHLERLLFILHTLVGHRDGAKITRPEAVCQMVLQLL
QAADLSGPCARLVLQIISSLLLGENVYLPPSLIQQTVKKVFGGGIDQDLILEFTKEMFTM
KQFEQFFLPSLLHFTEGLISSGDSVSRSSALEVLVSLILAKAPPPTDGSMAFEKYPLVFT
GQPPTEPAQPGLGTTDRLAVPEMVLSLLPLDRDQPVSDLSLPWSALVLLPHLRPLTPCQV
ISTVTTLLNRLLEEVESGALGKGGVFVSRQALSCLLSLDSSASGLTLVPVDKVKAILQKF
PNDVSALLLGDLYYTHLSLSGVSGHLSHSALLELYEMLHANLSSNISKIRLLTLRILNHF
EAELPAQPEGEESVKVQLVFAVCLQAEQVPASVQDYREKLLHLRKLRHDLVQRSLPQGLP
GTFQQVPLRYLIAMLFINFKPLWDPVIELLVTHARGMENKDFWKVYYEHLEMVAGLAEKE
LRESEEGEEDEADEGRPELSGEPGCDVIESGDLGVLFLERLRVTSDPGERTDFTNFRSLL
WKTMGQVPDRVEPRSRELSPLLLRFIRNEFYRTDMLMAPTQDLRKSPAQGDVSAAGQEGE
EEEEEEGGRPERKTPPRRAASKQLIAHLKVFAKFTNPRSLYLEPSLIQLYTQLLCHQDQQ
IQRAVLECVLTYKDPNILPYKDNLDRLLDDRHFKEEIVHFNISEERTVVDPSHRAQLIPL
LMRILFGRMRSKAGSKFQGKAAATQRSSIVLRFLAGCQEQELGMFIDLLLEPVCHHGQGA
CLEAVELAVAGTDVSAVLPLGRQHSLLNIVNVVIHKLGHLIHGYLPKLLQILLCVTASIT
TVLEHREQLKAGCVSPLKNLRRLGILRIQDFFDGFDSYSFTPDELDAVFQAVIWPQVCRL
PTESPYSPTPLLKLIHVWCKNSRYFPLLAKQRPDHPECDILLNVFALLAAKNVSPATVAM
VMDVAESLVTAADFVPSEGEAGLVVNGSVFPQPPEGAHITENVRQGSSLLLPHISTLLDY
LSSIVRNSDRLRKKKYRTQVAKELNILSKISLFVSSKEQSSLLISLLLPYLQKAFNPQET
ELDILATVQNLLRQCSQPGSFLRPLGRLFSILHHKLPRQALTNVFQTLSDLDPGLKYISD
MAAQMNKFDSRHLDEVHFDVRLTAFQEASRRIKQMDPLDMDYIYTVMHNCFHSFEIGDMS
LADNATLCLSAIVTQLAALGAAEEQYKEIVQYTILDAVRKGLRSKLESVQHDYTTVLACL
VRTFPTRRDFRDLVQLTDYNDPESDFFEHMKHIQIHRRGRALRKLAKQLTEGTVVMSSRS
LQNFIMPFAMTALLDEKMLTHESMVSASVEVIGAVCRRLTWSKYLYYLKHFIHILQTGQA
EQKLAVSLLVTILEAFHFDHGTLNREMEAAKTRAKEVVSVIVDEEGEEDEAPVDLDESDA
EDAMETGDAAKAGPTEPAAMETDVAEAVPMETAAPVSGAEPRVVAVKKPPAPPPVPGCCS
GLPQSPEELKSLIASIQNTVNNSVLPRLHKCLNAKVKRDEEHKAVKSKEVKEEEVVRVPI
AFAMVKLMQTLPTEVMESHLPGILMKVCVLLRNRFQEIRDVARNTLIKIIETLGCKYLQY
LLKEMHSVLVKGYQIHVLTFTVYRLLSAVSPTLKSGDLDSSMGLLLEIFNGELFGAVAEE
KEVKGIVSKLMEARSSKSMDSYEFLAQYCGKERFTQLILPMKEILETTTSLKVARRVHAV
LKRIVAGVLVNKGMTNQNILLLSHGLVSESLPLVTKTNKDKAPAQPPPDPRLPPPSCLLL
LPTPKRGARKAPISSRTNMHILVDTGLRLLHQSLKKARVTSSERMALEMLDPFIALLLDC
LSSMHVKVITETLLVFTLLLKFPLPAVERCAPQLTRQLFLLLKDYAKAGAARGENFHLVQ
NCFKSITILVRSMKSHKITETQLQVLLGYAEEDIYDQSRQATAFGLMKAILSRKLVVPEM
EEVMKKIAMQSVTGQNAMIRVQCRQIYMKYILDYPLGKKLKGHVDFIVAQLSYEYDTGRE
SVLEMIAYISQTFPQNLLLQHSGLFFVPLALSMVNDDSARCKKMAAQAIKTLLSRLDLHH
QNSLYTLVNTWLSGDKVSLRRLGAQVCGLFVEVEGMEFGRRLDALLPLLEREIHPDNYED
FEEEPDEKAADRLLFSYLTLVTKLTKDCGLLELSRPQDTLSNIWGHVEAHLRYPHCWVWL
TASQLFGQLFAAHQPQDLVARWRQGGPGASTSPEPVATTFLTTNLDKRMRELVLSFCHQL
QSKFLDVSSGEQVIKNLLFVAKVIYQISPEYDITANQEVERKENGEDEKDEDKDEDQKED
EEEVNHDRPPSLLWMMKKLSLMAKREAADTPKIPLKRTCVFKFLGAMAVDLGRERLGPYL
TTIVAPLYRELDSTYAEQDPTLKNLAQELMELLKKQVGLETFSLAFSSVQKEASQKRAVR
KRHRAMQAVANPEVAAKKKMKKHKNKIEAKKRKIEFLRPGYKAKKHRSHALKDLAMVK
NT seq
8457 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaatccaagtcgtcgtatcataaatcggagaatactttcaggtttctcacg
ttcgctgaaagactagccaacgttaatatcgatgtcatccatcgcatcgacagaacggga
agttacgaggaggatgtagagacgtatttctctgaaggactgacaaaatggagagacctt
aatttgacagaaaatttcaccacattcctgaaagaggtgtccaacaagtgtcagtcattc
aacctgctagtattccatcaaaatgccattgtggagagtctgaagactcacctagcggtg
aagaagagtttggccttccagccactcctggaactggtggtgcagcttgccagggacctc
cagacagacttctacccccacttccctgccttcttccccctaatcacctccctcctggag
acccaggacacagagctgctggaatgggccttcacctgcctctcatacctcttcaaatac
ctctggaggctcatggtcaaggacatcaccaacatgtatagtctgtacagcacattgctg
gcacacaagaaggagcacatccgcaggtttgctgctgagagcttctctttcctcatgaga
aaggttccagacctggatggtttgctgagccacatgttctccgacctgggggagcaccca
gagaaggcggagggggcgggtcagctgctgtttgagatgtgtaaaggggtcaggaacatg
ttccactcctgtgccgctaaggccctgccggtggctctgaagaagctggggccagctggc
aaccatgatgacgcttctctaaactgggaggctgtcagagatgctgtagatcaaatggcc
cgggcagcagccaatcatgtggagaaagaacacatcctggttctctgggagtctatacag
gcctgtgtgagcgaggtgctggctcagctggaggaggagagggagaaggctagggagacc
agcccagtgttggagcacctggagaggctgctgttcatcctccacaccctggtgggacac
cgagacggagccaagatcaccaggcccgaggctgtctgtcagatggtgctgcagctgctc
caggctgcagacctctcgggaccctgcgcccgcctggtcttgcagatcatctcctctctg
ctgctcggagaaaacgtctacctgccccccagcctcatccagcagaccgtcaagaaagtg
tttggaggagggatcgaccaggacctgattctggagttcaccaaggagatgttcaccatg
aaacagtttgagcagttcttcctgcccagcctgctccacttcacagagggcctgatctcc
agtggagactctgtgtctcgtagctcagccctggaggtgctggtcagtctcatcctggcc
aaggcccctccccccaccgatggatccatggcgtttgagaaatacccactggtcttcact
ggacagccgcccacggagccagcccagccagggcttggcaccacagacaggctggcagtg
ccagagatggtcctctctctcctgcccctggaccgggaccagcccgtctctgacctctcc
ctgccctggtccgccctggtccttctcccccacctccgacccctgacgccctgccaggtc
atctccacggtgacgaccctcctcaaccgcctactggaagaggtggagtctggagcgctg
gggaaaggtggtgtgtttgtgtccagacaggccctgagctgtctgctcagcctggacagc
tctgccagcggtctcaccctggtccctgtggacaaggtcaaagccatcctgcagaaattc
cccaacgatgtgtcagcgctgttgctaggagacctgtactacacccatctgtctctcagt
ggggtgtcaggccacctttcccacagtgcattgctggagctgtacgagatgctccacgcc
aacctctcctccaacatctccaagatccgtctgctgactctgaggatcctaaaccacttt
gaggcagaacttcctgctcagccagagggggaggagagcgtgaaggtgcagctggtgttc
gccgtgtgtctgcaggcggagcaggtgcccgcctcggtgcaggactaccgggagaagctg
ctccacctcaggaagctgaggcatgacctggtccagcgcagcctgccccagggcctgccc
ggaaccttccaacaggtgcccctgcgctacctgatagccatgctgttcatcaacttcaaa
ccgctgtgggaccctgtcatagagctgctggtgacccatgccagagggatggagaacaag
gacttctggaaggtctactatgaacacctggagatggtggcggggctggcagagaaagaa
ctgcgtgagagtgaggaaggcgaggaggacgaggccgacgagggccggccggagctgagc
ggcgagccgggctgcgacgtcatcgagagcggcgacctgggcgtgctcttcctggagcgt
ctgagggtgacctccgaccccggcgagaggaccgacttcaccaacttccgcagcctgctg
tggaagaccatgggccaggtccctgacagggtggagccccgcagccgcgagctgagcccc
ctgctgctgaggttcatcaggaacgagttctaccgaacagacatgctgatggcccctacc
caggacctgaggaagagccctgcccagggggatgtcagcgccgcggggcaggaaggcgag
gaggaggaggaggaagaggggggcagaccggagaggaagacgccccctaggagagctgca
tccaagcagctgatagcccacctgaaggtgttcgccaagttcaccaaccctcgctctctg
tacctggagcccagtctgatccagctgtacacacagctgctgtgccaccaggaccagcag
atccagagggccgtcctggagtgtgtcctcacttacaaagaccccaacatcctcccatac
aaggataacctggacagactgctggacgacaggcacttcaaagaggagattgttcacttc
aacatctcagaggagaggacggtggtggacccctcacaccgagcccagctcatacccctg
ctcatgaggatcctgtttggccgcatgcgcagcaaggctggcagtaagttccagggcaag
gcggccgccacccagcgctcctccatcgtgctgcgcttcctggcgggctgccaggagcag
gagctgggcatgttcatagacctgctgctggagcctgtctgccaccacggccaaggtgcg
tgtctggaggcggtggagctggcggtggcggggacggacgtgagcgccgtcctccccctg
gggcggcagcacagcctgctgaacatcgtcaacgtggtcatccacaagctgggccacctc
atccacggctacctgcccaagctgctgcagatcctgctgtgtgtcaccgcctccatcacc
accgtgctggagcacagggagcagttgaaggcaggctgtgtgagccccctgaagaacctg
aggcgcctgggcatcctgaggatccaggacttcttcgacggcttcgactcgtacagcttc
accccggacgagctggacgccgtcttccaggcggtgatctggccgcaggtgtgccgcctg
cccaccgagagcccctactcccccaccccgctgctgaagctcatccacgtctggtgcaag
aactccaggtatttccccctgctggccaagcagagacccgaccacccggagtgcgacatc
ctcctcaacgtcttcgccctgctcgcggccaagaacgtctccccggcgaccgtcgccatg
gtgatggacgtcgccgagtccctggtgacggcggcggacttcgtgccgtcggagggcgag
gcggggctcgtcgtcaacggcagcgtgttcccccagccgccggagggcgctcacatcaca
gagaacgtgaggcagggctccagtctgttgctgccccacatctccaccctgctggactac
ctgagcagcatcgtacgcaactcggaccgcctccgcaagaagaagtaccgcactcaggtc
gccaaggagctcaacatcctgtctaagatcagtctgtttgtgagcagtaaggagcagagc
tcgctcctcatcagtctgctgctgccctacctgcagaaggcctttaacccccaggagacc
gagctggacatcctagccacggtgcagaacctgttgagacagtgctcccagcctggctcc
ttcctccggcccctgggaaggctgttctccatcctgcaccacaagctgcccaggcaggct
ctcaccaatgtcttccagaccctgtcagaccttgaccctggactcaagtacatcagtgat
atggctgcacagatgaacaagtttgacagccgtcacctggacgaggtccacttcgacgtg
cgcctcacagccttccaggaggccagcaggcgcatcaagcagatggaccctctggacatg
gactacatctacaccgtcatgcacaactgcttccactcctttgagatcggtgacatgtct
ctggcagacaacgccaccttgtgtctgtctgctatcgtcacccagctggcagcgctgggc
gcagcggaggagcagtacaaggagatagtccagtacaccatactggacgcagtccggaag
ggtctccggagcaagttggagagtgtgcagcatgactacaccacagtgctggcctgtctg
gtcaggacgttccccaccaggagagacttcagagacctggtccagctcacagactataac
gacccagagtcggacttcttcgaacacatgaagcacatccagatccaccgcaggggacgc
gccctgaggaaactggccaaacagctgacggagggcacggtggtgatgtcatcacgctcg
ctccagaacttcatcatgccgttcgccatgacggcgctcctcgatgagaagatgctcacg
catgagagcatggtgtcagcgtcggtggaggtgataggtgctgtgtgccggaggctgacc
tggtccaagtacctctactacctcaaacacttcatccacatactgcagacgggacaggcc
gagcagaaactggctgtcagtctgctggtgaccattctggaagcgttccacttcgaccac
ggcaccctgaacagagaaatggaggcggccaagaccagggccaaagaagtggtgagcgtc
atcgtggacgaggagggcgaggaagatgaggcgcccgtcgacttggacgagagcgacgcg
gaggacgccatggagaccggcgacgctgccaaggcgggccccacggagccggcggccatg
gaaacggatgtcgcggaggcggttccgatggagacggcggctcccgtctccggcgcggag
cccagggtggtggcggtgaagaagcctcccgccccgccccccgtgcccgggtgctgcagc
ggtctgccccagagccccgaggaactgaagagtctcatcgcgtccatacaaaacaccgtc
aacaacagtgtgctccccaggctgcacaagtgcctcaacgccaaggtgaagagggacgag
gaacacaaggctgtgaagtcgaaggaggtgaaggaggaggaggtggtcagagttcccata
gcctttgccatggtcaagctgatgcagaccctgcccacagaagtcatggagtcccacctg
cctgggatcctgatgaaggtgtgtgttctgctgaggaaccgtttccaggagatccgagac
gtggctcggaacactctgatcaagatcatagagacgctgggctgcaagtacctgcagtac
ctcctcaaggagatgcacagcgtgctggtcaagggctaccagatccatgtgttgaccttc
acagtgtaccggctgctctctgccgtcagccccaccctgaagagtggagacctggactcc
agcatgggcctgctcctggagatcttcaacggcgagctgtttggggcggtggcggaggag
aaggaggtgaaggggatcgtgtcgaagctgatggaggctcgcagcagcaagagcatggac
tcgtacgagttcctggcccagtactgcggcaaggagcgcttcacccagctcatcctgccc
atgaaggagattctggagaccaccacgagtctgaaggtcgctcgcagggtccacgcggtg
ctgaagaggatcgtggccggtgtgctggtcaacaagggcatgaccaaccagaacattctg
ctgctcagccacgggctcgtcagcgagagcctacccctcgtcaccaagaccaacaaagac
aaggcaccagcccagccccccccggacccccgcctcccccctcccagctgcctcctcctc
cttcccacccccaagaggggggcccggaaagccccaatcagcagcaggaccaacatgcac
atcctggtggacactgggctcaggctcctccaccagagtctgaagaaggccagggtgacg
tcgtccgagcgcatggctctggagatgctggaccccttcatagccctcttgctggactgt
ctcagctccatgcacgtcaaggtgataacggagaccctcctggtgttcaccctgctgctg
aagttccccctcccggccgtggagcgctgcgccccccagctcaccaggcagctcttcctg
ctgctcaaggactacgccaaggctggcgccgcccgcggggagaacttccacctggtccag
aactgcttcaagtcaatcaccatcctggttaggagcatgaagtcccacaagatcacagag
acgcagctgcaggttctgctgggatacgccgaggaggacatctacgaccagtcccgccag
gccacggcgttcggactgatgaaggcgatactgtccaggaagctggtggtgccagagatg
gaggaagtgatgaagaagattgccatgcagtctgttaccgggcagaatgccatgatcagg
gtccagtgtcggcagatctacatgaaatacatcctggactatcctctggggaagaaactg
aaggggcatgttgatttcatcgtggcacagctaagttacgagtatgacacagggagagaa
tctgttctggagatgatagcctacatctcccagaccttccctcagaatcttctgctgcag
cacagtgggctgttcttcgtgcctctggccctcagcatggtcaacgatgactcggcgcgc
tgtaagaagatggccgcccaggctatcaagactctgcttagccggcttgacctgcaccac
caaaactccctgtacaccttggtcaacacctggttgtctggagacaaggtgtctctgcgt
cgcctgggggcccaggtatgtggcctgttcgtggaggtggaggggatggagtttggccgt
cgcctggacgctctgctgccactcttggagagagagatccaccctgacaactacgaagac
tttgaggaggagccggatgagaaggcggcagacaggctgctgttcagctacctcaccctg
gtcaccaagctgaccaaggactgcggcctgctggaactcagcaggccccaggacacgctc
tccaacatctggggtcacgtggaggcccacctgcgctaccctcactgctgggtgtggctg
accgcctcccagctgtttggacagctgtttgctgcgcaccagccccaggacctggtggcc
cgctggaggcagggggggccgggggccagcaccagccccgagccggtggccaccaccttc
ctaaccaccaacctggacaagaggatgagagagttggttctgtctttctgtcaccagctt
caatccaagttcctggacgtttcctcaggggaacaggtgatcaagaacctgctgtttgtt
gccaaggtgatttaccagatctcacccgagtatgacatcacagccaaccaggaagtggag
aggaaggagaatggagaggatgaaaaggatgaggataaagatgaggaccaaaaggaggat
gaggaagaggtcaaccacgaccggcctccttcgctgctgtggatgatgaagaaactgtct
ctgatggccaagagagaggctgctgacacacccaagatccccctgaagagaacgtgtgtg
ttcaagttcctgggggccatggctgtggacctggggagggagcgtctggggccctacctg
accaccatcgtggctcccctctacagggagctggacagcacctacgctgaacaagacccc
acgctgaagaacctggcccaggagctgatggagctcctgaagaagcaggtgggcctggag
accttctccctggccttctcatcagtccagaaggaggcctcgcagaagagagccgtccgc
aagagacacagagccatgcaggcggtggctaacccagaggtcgctgctaagaagaagatg
aagaaacacaagaacaagatcgaggccaagaagaggaaaatcgagttcctgcggccgggt
tacaaagccaagaagcaccggagtcacgccctcaaagacctggccatggtgaagtaa
DBGET
integrated database retrieval system
