Osmerus eperlanus (European smelt): 134038010
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Entry
134038010 CDS
T10927
Symbol
cfap54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oep03037
]
134038010 (cfap54)
Cilium and associated proteins [BR:
oep03037
]
Motile cilia and associated proteins
Sperm associated proteins
134038010 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
134038010
NCBI-ProteinID:
XP_062339587
LinkDB
All DBs
Position
17:complement(391758..427391)
Genome browser
AA seq
3057 aa
AA seq
DB search
MENLPASFYGEIDKRNPVISAFDSDIKEFMSLMKRVSNLPTYDHKSYSRGAKSIFDIWNK
YKPRLPTAYYENYMLHIADFLFEIKFYRLALWQGYGRYLQLVSTSSIADIQDVEHFKTCF
FPDGFDTDRAKLTFRALQGCCQCCFQQEQGASRSGPQGVQRLLALLGFIRVMMQAALPHD
HLCWLVYNGSLYIYNICRHLMSMNQTAQTLEYLLWACVCLETSVPLATAGFLPWRSTLYC
AVCHCYYHSQAGLQAEVFARGALGKVSELGRLEEMTGLPASPDTQRAYKEATIKLTAMVF
RRSVYEPRRKPKGMFRPKLKSTLKEIQGMPWPRTATERVLVEVFEGAAAQLLAVLEALGE
RPRRPLHSSLPEEPEAQEVVLELLAAGASLLAGKGGSIEKERDESLPSCLSSLCTSSSLL
ELAVAGENRVSVQAAVSFIKLLYRYEQWDTFCTLSDHLLNFLSTLGQQDFRAAQLDLVLL
QAMERLLSSHKHLNNKDQPEKDGLGGCMSDELLVLAQTLHVCVCDSSQRVRPDADLVLDL
VLYLWARCKPVFQTAQNTTHTHLLRGLEHLEQWVRVLSWLGEVVCVCGLGEWDPLLQAEI
TLRLASVLESSAHATEPPARSRPRTASSDDITAQAPPTQERLQAVCVLVQQGLQGIVQGW
TAMMPADGSAIADNAFLQKYKRMASRSPAGETAGRGGGGGGGGRGGGGTDGGEETAGGGG
EETEVLKNTCLFLVPMDQVVELLAIQHRVSLKLILTYPAELECGDSRRSLRPSGVEVLET
ASQRESALLEKIKKNRVSRALFLVQKAVLAHRHHQDNSATRRLLEEAVLQLEKAGVEERR
AGLERRDGGMEEEERKNRPPPPPILLSRTNHSMTFAPAPYALEQQVCWYCIYGREAEGVN
LKVRLGDCLLVGTGDQVPALGECVLRVDGLEPNQQYVFAVAAWDGHGSLLGGGVGETTRP
LLASPPLALLTIWAHLAQAAFQTGHSSLVKRACGELWSHFTLQDPPQQAGGSSRPGGLPH
TRLCMQTVRLSSPLLLQLFFTSILMQTETHIQEGALHCDALSDQGPLSWGQELRLAECAR
LQVAMDVSLWLNKDSAALQAVVGCYGLLAPLIFHQIYAEPVVQVLMRCLVVLQEISPELK
LKRPASTFESLLHMVACITYYLSKALRTLSLSCVAVPVMEMGKRLLQELSEISATDQETD
RLPRRDQETDRLPRRDQETDRLPRRDQETDRLPRRDQETDRLPRRDQETDRLPRRDQETD
RLPRRDQETDRLPRRDQETDRLPRRDQETDRLPRRGGVGEEASEQLRALEGKRASSGSHS
HELIGQEDPVLLYSTLSCCPLKSCYKEVMKVKRKACFLECAVLLLQRSLQEEQLCLVTQW
GQDIFTWITRRDECLAGPKKLQDRGGLGKLSSCTENKKKSGSIWTDKKKREFLQRKLLSG
LKTQNTDRESRAVDTLLAQLPPLLPGYQRRRRLRQVCSEEWLWRCHANLSMGLAHLGMLR
HNLELSLAASCPYRYSQLPPSLFSLYQSGILVQWGPQPPSASPQPPSASPQPPSASPSAS
PQPPSASPQPPSASPQPRPRSAPRNPLHRTRENEPGMTASGEEEPITAESETDSPRMAQT
NQSDHSEPSRRSASLLHDSLSKAVLHLRRAMVLAHRGRHWTSLQSVCVSVWDQACSLSAV
LHPPSPLTLEQLHSALTPLYTLAADLLLDMMDQLQLWVVYEAAQAQGPWRSFPQEEQLLV
GHGWLSRLLLHTLELLHQQARWETLAHLALLFNTRTRERHTRVITPLLVHAQQRLLERIS
LYGGAPSPQPHLTRTHLLTGHQARHTHHSYIHTPFIHTHHSYIHTPFYTHIIHTHTPYSN
LEKSSPQVTCKSYTGQQLLSAWTPHPHPSTPHPHPSTPHPHPSTPHPHPSTPHPHPSSPD
LETLQLAEVRRAMCVVRVPLDVEDSLRCFREAVERDCHTHTHHTFQHSRTLLTLLLAHTQ
TSVLEGSQDGGGAQGPQGRVEFRGAVSSAPGSAPPDLDFLGSLYRPPLPPSHTPRVISSY
SSSIKCMEAQGEVSLKCQALHELGNLYYYTGNHRAAQAAWSRAVDGSLHRSGVLDTWAGL
TWPGHAQTLRHSGIRGCLQAAVLTAKIAQFIQTSNISQRTQTCLLSAQLFKCLLQASLPH
PSSDLQYASYSVGAELIPGVELFSDPGHAPLGDTVSSLGFLCHWLYSAGEHLTVLPMLAL
YLHLVSTLCRDTHLTITARILKVRVLAELGLFCQAVREAVLLTQGEEEPHKTGPIKTFNT
NKTLLNPANLQALEDLVNRGVSPEVGLLYGARLAQRLPLAQAHLLLALCRTIHTLPEALD
TDVLQPRRDKLLRSSSTPNLPRPPPSDTDRRSRDPKQLDLQRENLTLGQVKSLLLREAGC
MLHSQQPLVCTPGDPEQQELQVDTLLLLADLHLQLGQAASSADMAVAALEMLHTAASPPP
GGPAPPAPRPSGYSRPWSDQAGVKEGGKVSSLHPGTTAQGAESRERLGPALWLRCRLVLL
QSLLAHTPGASIYTGVDSSVEAARLLKEGVQEAESWGDPHTHALLLLQGATLSTHSGDSI
TLLQKAVSVLSGQPSLCPGSVLLVSRAAILLWDLGAEGHLSLARHTQSLLLTQLRVFGES
VSLGEGGRVLLSPGPSNIYLPLLPLLTAITTRLGLNLAAQALTMLSQQAQEVLQSSLQLS
RSCCSRDLLLETHILHCLGLVQRYQMLLGDVPAQRVLETFLECLQLSLQHCHSLLLVRKC
YQEMALVYLHLHHSSSASSTPRTLVLRSSSMNRGVSASGYMLLCGGPCCVDLRTPHPASC
LSPPSTLPRFALNDLLNPCGGVDQQGARTSRGSPESRMSIRKCSLLTWLQLSRYYTHLSR
LCSTMHPAVHAVVPAPPLVSPDNQDMVLLLFAVSSSGVSCRSAPPLHCGQQLLSMDRVRV
AHAQLCAACVGVSLAPPPPAAPSPAPSPAPSHAPSPASRQLRHPGPSDTHVLILQEKVRS
CCSAITHLLKPGLQSTTLPQVEVSGQTLIDLERCFNPGGGAILEEKSLIGWLDSLLS
NT seq
9174 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttaccggcgtcattttacggggaaattgacaaaagaaaccccgtaatttct
gcttttgatagcgacattaaagagtttatgtcgttaatgaaacgagtcagtaatttgcct
acctatgaccacaaatcgtactcgagaggagccaaaagtatctttgatatatggaacaag
tacaaacctcgacttccaaccgcctactacgaaaattatatgctgcatatagccgatttt
ctgttcgaaataaagttctacaggctggcgctgtggcagggctacgggcgctacctgcag
ctggtcagtaccagcagcatagcagacatccaggacgtggagcacttcaagacctgcttc
ttcccagacggctttgacacagaccgggccaagctcactttccgggcgttgcagggctgc
tgccagtgttgtttccagcaggagcagggtgctagccggtctggcccacagggcgtccag
agactgctggccctgctgggcttcatccgggtgatgatgcaggccgctctgccacatgac
cacctctgctggctcgtctacaacggctccttgtatatctacaacatctgtcgtcacctg
atgtccatgaaccaaactgcacagactctagaatatctgctgtgggcgtgtgtgtgtctg
gagacatccgttcccctggcgaccgctggcttcctgccctggaggtccaccctgtactgt
gctgtctgccactgctactaccacagtcaggctggcctgcaggccgaggtgtttgcgcgg
ggggcgctgggcaaggtgagtgagctaggcaggctggaggagatgaccggccttcctgcc
tccccagacacccagagagcctacaaggaagccaccatcaagctgacagccatggtgttc
aggcgctcggtgtatgagccccggaggaagcctaaaggcatgttcaggcccaagctgaag
agcactctgaaggagatccaggggatgccgtggcctcgtacagcgacagagcgggtgctg
gtggaggtgtttgagggggcggcggcccagctgctggctgtgctggaggccctgggggag
cgcccccgccggcccctgcacagcagcctgcctgaagagcccgaggcccaggaggtggtc
ctggagctgctggctgctggggccagtctgctggccgggaaggggggatctatagagaag
gagcgggatgagagcctgccttcctgtctgagttcactctgcacctcctcctctctgctg
gagctggctgtggcaggggagaacagagtgtctgtgcaggcagcagtgagcttcatcaag
ctgctgtatcgctacgaacagtgggacacgttctgtacactgtctgaccatctgctcaac
ttcctgtctaccctggggcagcaggacttcagggcagcacagctggatctggttctgctg
caggccatggagcgcctgctgtcatctcacaaacacctcaacaacaaggaccaacctgag
aaggacgggctgggggggtgtatgagtgatgagctgttggtcctggctcagaccctacac
gtgtgtgtgtgtgactccagtcagagggtgcggcctgatgcagaccttgtcctggacctg
gtactgtacctgtgggccaggtgtaagcccgtgttccagacagcccagaacaccacccac
acacacctcctgaggggcctggagcacctggagcagtgggtgagagtgctgtcctggctg
ggggaggtggtgtgtgtgtgcggtctgggggagtgggatcctctgctgcaggcagagatc
accctgagactggcctctgtcctggagagcagcgcccacgccacggagcctccagcacgg
agcaggcccaggacagcctccagcgatgacatcactgctcaggcccctcccactcaggag
cgtctccaggccgtgtgtgtgctggtgcagcaaggtctgcagggcatcgtccagggctgg
accgccatgatgcctgccgacggcagcgccatcgctgacaacgccttcctgcagaaatat
aaaaggatggccagtcgctcgcctgcaggagagacagcaggacgaggagggggaggggga
ggaggaggaagagggggagggggaacagatggaggagaggagacagcaggaggaggagga
gaggagacagaagtgttgaagaatacctgcctgtttcttgttcctatggaccaagttgtg
gaacttctggctattcaacatagggtctccctcaagctgatccttacctacccagctgag
ctggagtgtggtgacagtaggaggtctctgcggccctctggtgtggaggtactggagaca
gcatcacagagagagagcgccctgttggagaagatcaagaagaaccgtgtctccagggct
ctcttcctcgtccagaaggctgtgctggctcacaggcaccaccaggacaacagcgccacc
cggaggctcctggaggaggcggtgctgcagttggagaaggcaggggtggaggagcggaga
gcagggctggagaggagggatggagggatggaggaagaggagaggaagaacaggcctccc
cctcctcccatcctcctctcccggactaatcactccatgaccttcgcccccgccccctac
gccctggaacagcaggtgtgttggtactgtatctatggtcgagaggcagagggtgtcaac
ctgaaggtgcgtttgggagactgtctcctggtgggcactggagaccaggtaccagcacta
ggagagtgcgtgctgagggtggatggcttggagcccaaccagcagtatgtgtttgcagtg
gcagcctgggacggccatggcagcctgctgggggggggcgtgggagagaccaccaggccc
ctgctggcttccccccccctggccctcctcaccatctgggctcacctggctcaggcagcg
ttccagaccgggcacagctccctggtgaagagagcctgtggagagctgtggagccacttc
accctgcaggaccccccccagcaggccgggggcagcagcaggcctgggggcctcccacac
acacggttgtgtatgcagaccgtgcgcctctcctctcctctcctcctccagctgttcttc
acctccatcctgatgcagacagagacacacatccaggagggggcgctgcactgcgatgct
ctcagcgaccagggccctctgtcctggggtcaggagttgcgtctggcggagtgtgcgagg
ctgcaggtggcaatggacgtgagcttgtggctgaacaaggacagcgccgccctgcaggcc
gtggtgggctgctacggccttctggccccgctcatcttccaccagatctacgcagagccc
gtggtgcaggtgctgatgaggtgtctggtggtgctgcaggagatctcccctgagctgaag
ctgaagcgtccagcctccacctttgagtccctgctgcacatggtggcttgcatcacctac
tacctctccaaggccctgaggactctgagcctgtcctgtgtggctgttcctgtgatggag
atgggcaagaggctgctgcaggagctgagtgagatctctgctacggaccaggaaacagac
aggctgcccaggagggaccaggagacagacaggctgcccaggagggaccaggagacagac
aggctgcccaggagggaccaggagacagacaggctgcccaggagggaccaggagacagac
aggctgcccaggagggaccaggagacagacaggctgcccaggagggaccaggagacagac
aggctgcccaggagggaccaggaaacagacaggctgcccaggagggaccaggagacagac
aggctgcccaggagggaccaggagacagacaggctgcccaggaggggaggggtcggggag
gaggccagcgagcagctgagagctctggaggggaagagagccagctctgggtctcacagc
catgagctgataggccaggaagatccagtcttgctgtacagcaccctgtcctgctgcccc
ctgaagagctgctacaaggaggtgatgaaggtcaagaggaaggcgtgcttcctggaatgt
gcggtgctgctgctgcagaggagcctgcaggaggagcagctgtgtctggtgacacagtgg
ggccaggacatcttcacctggatcaccaggagggatgagtgtctggcaggtcctaagaag
ctccaggacagaggaggcctggggaagctctcctcctgcacagagaacaagaagaagtct
ggttcaatctggacagacaagaagaagagggagtttctgcagaggaagctgctcagcggt
ctcaagacacagaacactgacagggagagcagggcagtagacaccctgctggcccagctg
ccccccctgctgcctggttaccagcggcgacgccgtctccgccaagtctgctctgaggag
tggctgtggcgttgtcatgccaacctgagcatgggcctcgcccacctgggcatgctcaga
cacaacctggagctcagcctcgcagccagctgcccttaccgctacagtcagctgcctccc
tccctgttctccctgtaccagagtgggatattggtgcaatggggcccccagcccccctct
gccagcccccagcccccctctgccagcccccagcccccctctgccagcccctctgccagc
ccccagcccccctctgccagcccccagcccccctctgccagcccccagcctcgaccacgc
tctgccccacgaaaccccctgcacaggaccagggagaacgagccaggtatgaccgccagt
ggggaggaggagccaatcacagcagagagtgagacggactctcctcgcatggctcagacc
aaccaatcagatcacagcgagccctcgcgacgctccgcctccctgctgcacgactccctc
agcaaagctgttctgcacctcagaagggctatggtgctggctcatcgtggccgccactgg
accagtctgcagagtgtgtgtgtcagtgtgtgggaccaggcctgcagcctgtctgctgtg
ctgcaccccccctcccccctgaccctggagcagctccactctgccctcaccccgctctac
accctggcagccgacctgctgctggacatgatggaccagctgcagctgtgggttgtgtat
gaggctgctcaggcccaaggcccgtggaggtccttcccccaggaggagcagctgctggtg
gggcacggctggctgagccgcctgctcctccacaccctggagctgctgcaccagcaggct
cgctgggagaccctggcccacctggccctgctgttcaacacacgcacacgggagcgccac
accagggtcatcacccctctgttggtccacgcccagcagcgcctgctggagaggatcagc
ctgtacggaggcgccccctccccccagcctcacctgaccaggacacacctgctcaccgga
caccaggcgagacacacacaccattcatacatacacacaccattcatacacacacaccat
tcatacatacacacaccattctacacacacatcattcatacacacacaccatacagtaat
ctagagaaatcgtctccccaggtgacctgcaagagctacacaggacaacagctgctgagc
gcatggacccctcatcctcaccccagcacccctcatcctcaccccagcacccctcatcct
caccccagcacccctcatcctcaccccagcacccctcatcctcaccccagcagccctgac
ttagagaccctgcagctggccgaagtgcgccgggccatgtgtgtggtgcgtgtgcccctg
gatgtggaggactccctgcgctgcttcagagaggctgtagagcgagactgtcacacacac
acacaccacaccttccagcacagcaggaccctgctcacactgctgctggctcacacacaa
acctctgtgttggaggggagccaggatggtgggggggcccaggggcctcagggcagggtg
gagttcaggggggcggtgtcctcggcccccggctcggcccccccagacctggacttcctg
gggtcactctaccgcccccccctgcccccctcccacactcccagagtcatatcctcctac
agcagctccatcaagtgcatggaggcccagggagaggtgtctctgaagtgtcaggctctg
catgagctggggaacctctactactacactggcaaccacagggcggcgcaggctgcgtgg
agcagggctgtggacggctccctgcacaggtctggagtcctggacacctgggccggcctc
acctggcccggccacgcccagaccctgaggcattctgggatacgaggctgcctgcaggcc
gctgtgctcactgccaagatcgctcagttcatccagacatctaacatcagccaacggacc
cagacctgtctcctgtctgcacaactcttcaagtgtctcctgcaggcctccctccctcac
ccctcctcagacctccagtatgcctcctacagcgtgggggcggagcttatcccaggggtg
gagctcttctctgatccaggccacgcccccttgggtgacacagtgtcatcactgggcttc
ctctgtcactggctgtactctgctggagaacacctcacggtgctgcccatgctggctctc
tacctgcacctagtcagcacgctctgcagagacactcacctcaccatcacagcaaggatc
ctgaaggtgagggttctggcagagctgggtctcttctgtcaggctgtgagggaggctgtt
ctgctgacgcagggagaggaggagccacacaagactgggcctatcaagacgttcaacacc
aacaagactctgctgaaccctgccaacctacaggcactggaggacctggtgaaccgtggt
gtgagccctgaggtcggcctgctgtacggagccagactggcccagcgcctccccctggcc
caggctcacctgctgctggccctctgcaggaccatccacaccctgccggaggccctggac
acagatgtgctccagccccggagggacaagttgctgcgctccagcagcacccccaacctg
ccccgccccccccccagtgacacagacaggaggagtagagaccccaaacagctggacctg
cagagggagaacctgaccctgggccaggtcaagtccctgctcctgagggaggcaggctgc
atgctgcactcccagcagcccctggtctgcacccctggtgacccagagcagcaggagcta
caggtggacactctgctgctgctggcagacctgcacctgcagctgggccaggctgcctcc
agtgcagacatggcagtagcagccctggagatgctccacactgcagcctccccgccccct
ggaggcccagcccccccggctccccgaccctctggatacagcaggccttggagtgaccag
gcaggagtgaaggagggagggaaggtgtccagccttcatcctggaacaacagcccagggg
gcggagtctcgtgagcgtctaggccccgccctctggctgcgctgcagactggtcctgctc
cagagcttgctggcacacacccctggagcctccatctacacaggtgtggacagcagtgtg
gaggcagcccgactgttgaaggagggtgttcaggaggcggagtcctggggagacccacac
acacacgctctgcttctcctgcagggggcgacactgagcacacactctggagacagcatc
actctgctgcagaaggcggtgagtgtgttgtcagggcagcccagcctgtgtccaggctca
gtgctgcttgtgtccagggctgctattctgctgtgggacctgggagcagagggccacctc
agtctggccaggcacacccagagcctgctgctcacacagctgagggtgtttggggagagc
gtgtcgctgggggagggaggcagagttctcctgtccccaggtccctccaacatctacctt
ccccttctgcccctgcttactgccatcaccacgcgcctgggtctcaacctggcagcccag
gcactgaccatgctgagccagcaggctcaggaggtgctccagtcgtccctgcagctgtcc
aggtcctgctgctccagggacctgctgctggagacacacatcctgcactgtctgggcttg
gtgcagaggtaccagatgctgctgggtgacgtcccagcccagcgtgtgttagagaccttc
ctggagtgtctccagctctccctgcaacactgccactctctgctgctggtgcgtaagtgt
taccaggagatggcgctggtgtacctccacctacaccacagtagctccgcctccagcacc
cccaggactctggtgttgaggagctccagtatgaacagaggtgtgtcagcatcagggtac
atgctgctgtgtggagggccatgctgtgtggacctccgaactccacatccagcctcctgc
ctctcacctccctccaccctgcctcgcttcgccctcaacgacctgctcaacccctgtggt
ggggtggaccagcagggggccaggaccagcagggggtctccagagtccaggatgagcatc
aggaagtgttcccttctcacctggctgcagctgtccagatactacactcacctgtcccga
ctctgctctaccatgcacccagctgtgcatgcagtggtaccagccccccccctggtctcc
cctgacaaccaggacatggtgctgctgctgtttgctgtgagcagctctggtgtctcctgc
cgctctgctcctcctctacactgtggccagcagctgctcagcatggacagggtgagggtg
gcacacgctcagctgtgtgcagcgtgtgtgggtgtcagcctggctcctccccctccagca
gcacccagccccgcccccagccccgcccccagccacgcccccagccccgcctccaggcag
ctgagacaccccggaccctccgacacacacgtactgattctgcaagagaaggtgaggagc
tgctgttctgccatcacacacctcctgaagcctggcttacagtcgaccacactccctcag
gtggaggtgagcggtcagactctgatcgatctggaacgctgcttcaaccctgggggcggg
gccatacttgaggaaaagtctctgattggctggctagactctctgctcagctga
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integrated database retrieval system
