KEGG   Osmerus eperlanus (European smelt): 134038129
Entry
134038129         CDS       T10927                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04510  Focal adhesion
oep04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:oep00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134038129 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134038129 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C Alanine_zipper
Other DBs
NCBI-GeneID: 134038129
NCBI-ProteinID: XP_062339729
LinkDB
Position
17:4418698..4435286
AA seq 1781 aa
MLIFHIATILILGCRAVQQLPEFGDVCTEGSCYPATGDLLIGRAHQLTASSSCGMKRPER
FCIVGHLEDEKKCFVCDSRKMYNERTNHTTSHTIENVVTTFAHNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPASMVIERSMDFGKTWQVYRYYSYDCEASFPGVSLGPV
VKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFEIADPYSTRIQNMLKITNIRVKFTQLHT
LGDNLLDSRDEVTKKYYYALYDMVVRGNCFCYGHASKCAPVDRATVDFDGMVHGHCMCNH
YTKGLNCELCQDFYNDQPWKPAEGRNTNACKKCECNQHSGKCHFDLAVYMSTGNVTGGVC
EDCQHNTMGRQCEQCRPFYYQHPHRTLRDPRLCEQCNCDPDGSLQGGVCDARTDVSLGLI
AGQCRCKASVEGERCDHCRQGHYGLGRDPLGCMPCTCNPLGTLPGGNPCDMDSGNCFCKR
LVTGRNCDQCLPQHWGLSMDMDGCRACDCDQGGAIHNNCDPVSGQCVCRDHMFGQRCDQV
ESGFYFIALDHYIYEAEDAKHGPGVTVVPRPYPPLPRSPTWTGMGFVNVPEGAHLEFIIN
NIPESMDYDLLIRYEPQLPQQWEQVNMRVERPVFNPSDLSSLCANSIPGGDQQTVSLPPG
SRHVVLPRPVCLEKGYNYTMRLSLPLYSSLGHVQSPYTLIDSLVLMPRVRELDMFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICNDYIFSVSALLHQGAMACQCDPQGSLSTVCEP
SGGQCRCRPNVVGRNCDHCSPATYLFSPAGCRACGCDPQGSLHAFCQEASGQCECVPGAT
GRHCAHCQPGFWGFPHCRPCHCNGHSEYCHPQTGECQDCRDSTTGQNCERCLSGYHGDPV
LGSGGQCRPCLCPDGPGSGRQFAEGCYHELPSQKLVCACSPGYRGPRCNECAPGYYGNPQ
VPGGRCLPCQCSNNIDMHDPGACDARTGSCLRCLYYTEGSNCHRCKAGYHGNAATQSCRR
CMCFAVGTASQACPAPDECHCDLHSGQCPCQPNVVGKSCDRCAPNTWNLASGAGCQACDC
DPAHSFSSSCSEVTGQCSCRPGFGGRTCRECRELFWGEPKVKCHACDCDPRGIAREQCHK
TTGQCACVEGVTGPRCDQCARGFQGEFPACELCHQCFSAWDRVVGELTNQTRRLDEHVSE
LLTTGVTAPYKETVSSLETSAKAVRDLLENNPAWQQLEEIQQLMLRTTSLVADLNERLNT
TEDTLSRLHGDANQTAASLDALRQGAEDLERSVREIRQQVDNVKNSNIQGAMDSITTAHL
ESRMAEHRANVSTSNPGNTVEESAKLRRAAEDKLSKSQKEFDRKQQRHTQKLEKLAKDLD
AFDLSGLSKQTCGAEGGVEGCDGSPCGGLGCVGEDGTHHCGGEGCEGLVTTSQTALKSSK
DLDQDILTAMQEVDELSRMVWEAKVRADQAKLTAQEVLLKSNRSRERVEQSNQQLRNLIK
EIRDLLTNERADVSVIEAVANEVLALDMPTSPTQLKELTNEIKEKVGTLTSVESILIQSA
KDIQTAETLLQQARTASQEASNMKETADLVKEALEKTEHAQNAAIDAIKQASNNTKGTLD
LLTSVESETADSELKLSNTTLRLLQLERDVSLLREISLESSHKAEHTQTVTDLAKQEADQ
AQQEFESEVKDKYSVVEELVVDKAEGVSDARKRAEQLQEEAKELLSQTSDKLQRLRELER
SYEDNQLLLESKAEQLAVLESTARQLLTDISMKVTVYSTCL
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgttgatatttcatatcgcaaccatactcattctcgggtgtcgagctgtccagcagctc
ccggagtttggggacgtttgcaccgagggcagctgctaccccgctactggagacttgctg
atcggccgtgcgcaccagctgaccgcttcctcctcatgcggcatgaagcggccagagcgc
ttctgcattgtcggccacctggaggatgagaagaaatgttttgtgtgtgactccaggaag
atgtacaatgagcgaacgaatcacacaaccagccacaccatcgagaacgtggtcaccacc
ttcgctcacaaccgcctcaaaacctggtggcagtctgagaatggtgtggagaacgtgacc
attcagctgaacttggaagcagagtttcatttcactcacctcatcatgaccttcaagaca
tttcgcccagcgtccatggtcatcgaacgttctatggactttggcaagacgtggcaggtg
taccgttactatagctacgactgcgaagcctccttccctggcgtgtcgctgggacccgtg
gtcaaagtggacgacgtcatctgtgactcgcgctattccgacattgagccgtccacggag
ggagaggtgatatttcgtgtgctggacccagcctttgagatcgcagacccctatagcacc
agaatacagaacatgctgaagataacaaacatacgagtgaagttcacccagctgcataca
ttgggtgacaacctgctggactctcgtgatgaggtcaccaagaagtactactacgctctc
tacgacatggtcgtccgtggcaactgcttctgctatggccacgcctccaagtgtgcccct
gttgaccgtgcaactgtggactttgatggcatggtccatggccactgtatgtgtaaccat
tacactaagggtctgaactgtgagctctgtcaggatttctataatgaccaaccctggaaa
cctgcagaaggacgtaacacaaacgcctgcaaaaagtgtgagtgcaaccagcactctggg
aagtgccacttcgacttggcagtgtacatgtctacagggaatgtgacgggtggggtgtgt
gaggactgtcagcacaacaccatgggccgtcagtgtgagcagtgtcggcccttctactac
cagcacccccacaggaccctgagggacccgcgcctctgtgaacagtgtaactgtgacccg
gacggctcgctgcaggggggggtgtgtgacgcgcggacggacgtgtccctgggtctgatt
gctggccagtgtcgctgcaaggccagcgtggagggagagcgctgtgatcactgcagacaa
ggacactatggcctgggacgggaccccctgggatgcatgccatgtacctgtaacccattg
ggcacgctgccggggggaaacccatgtgacatggactcaggaaactgcttctgcaagcgc
ctcgtcaccggcaggaactgtgatcagtgtctgccacaacactggggtctcagtatggac
atggacggctgtcgagcatgtgactgcgaccagggtggagccatccacaacaactgtgac
ccggtgtcgggccagtgtgtgtgtagggaccacatgtttggccagcgctgtgaccaggtg
gagtctggcttctacttcatagctctggaccactacatctacgaggcagaggacgccaag
cacggacctggagtgaccgtggttccgaggccctacccccccctaccccgcagccccacc
tggacaggcatgggctttgtcaacgtccctgaaggagctcacctggagttcatcatcaac
aacatcccagagtccatggactatgacctgctcatccgctacgaaccgcagttgccccag
cagtgggagcaggtgaatatgagggtggagcggcctgtcttcaacccttcagacctcagc
agtctgtgtgctaactccataccagggggagaccagcagaccgtctctctgcctccaggg
tccagacatgtggtgctgccgaggcctgtttgtctggagaagggctacaactacacaatg
cgtctgagtctgcctctctactcctcgctcggccatgtccagagcccctacacactcatc
gactctttggtgctcatgccgcgggtgcgggagctggacatgtttgagggcagccagggc
gagggagcgtgggacacgttccagaggtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgaccgacatctgcaacgactacatcttcagcgtgtccgccctgctgcac
cagggagccatggcgtgccagtgtgacccccagggttccctcagtactgtgtgtgagccc
agcggcggccagtgtcgatgtcgccccaacgtggtgggcaggaactgtgaccactgttct
cccgccacctacctgttcagcccagcaggctgcagagcctgtggctgtgatccccagggc
tcgctccatgccttctgccaggaggcctcaggtcagtgtgagtgtgtgccaggggccaca
gggcgtcattgtgcccactgccagccaggcttctggggattcccacattgccggccctgc
cactgcaacgggcacagcgagtactgccacccccagactggagaatgccaggactgcaga
gactccaccaccgggcagaactgtgagaggtgtctgagtggttaccacggtgacccggtc
cttggttctggtgggcagtgccgcccgtgcctctgccccgacgggcccgggagcggacgg
cagtttgcagaaggatgttaccatgagctcccctcccagaagctggtgtgtgcctgcagc
ccgggatacagaggacccaggtgtaacgaatgtgcccctggttactacggtaacccccag
gtgcccggagggcgctgtctgccgtgccagtgtagcaacaacatcgacatgcacgacccg
ggcgcctgcgacgcccggacgggctcctgccttagatgcctgtactacacagagggctcc
aactgccatcgctgcaaagcgggttaccacggcaacgcagccacccagagctgcagaagg
tgtatgtgcttcgctgtgggtacggcatcgcaggcctgccctgctccggacgagtgtcac
tgtgacctgcacagtggccagtgcccctgccagcccaacgtggtgggtaagagctgtgac
cgctgtgctcccaacacctggaacctagccagcggagcgggctgccaagcctgcgactgt
gaccccgcccactccttcagctcctcctgcagtgaggtgacagggcagtgctcatgcagg
cctgggttcggaggcaggacctgtagggagtgcagagagctgttctggggagagccaaag
gtcaaatgtcatgcgtgtgactgcgacccacgcggcatcgccagagagcagtgccacaag
accacgggccagtgtgcgtgcgtggagggcgtgacgggccccaggtgtgaccagtgtgcc
cgcggcttccagggggagttcccagcctgcgagctctgccaccagtgcttctccgcctgg
gaccgcgtggtgggggaactgaccaatcagacgcggcgactagatgagcatgtgagcgag
ctcctgaccactggggtgacggcgccctacaaggagacggtgagcagcctggagaccagc
gccaaggctgtcagagacctgctggagaacaaccctgcctggcaacagctggaggagata
cagcagctgatgctacggaccacgtcgctggtggcagacttgaacgagaggctgaacacg
acagaggacaccctctctcgtctccacggcgatgccaaccagaccgccgccagtctggac
gccctgaggcagggggccgaggacctggagcgctccgtcagagagatccggcagcaggtg
gacaacgtgaagaactccaacatccagggagcgatggacagcatcaccaccgcccacctg
gagtctcgcatggcggagcaccgggccaacgtctccaccagtaaccctggcaacacagtg
gaggagtctgcaaagttgcggcgcgccgcagaggacaaactgagcaagagccagaaggag
ttcgaccggaagcagcagagacacacgcagaaactggagaagctggccaaagacctggat
gctttcgacctatcgggactcagcaagcagacgtgcggtgctgaggggggtgtggagggg
tgcgatgggtccccctgtggaggtctgggatgcgtgggggaggacggcacacaccactgt
gggggtgagggctgtgagggcctggtcacaacatcacaaaccgccctgaaatcctccaag
gacttggaccaggacatcctcactgccatgcaggaagtggacgagctctccaggatggtg
tgggaggcgaaggtgcgtgcagaccaagccaagctcactgctcaggaggtgctgctcaag
tccaaccggagcagagagagagtggagcagagcaaccagcagctgcgcaacctcataaag
gagatacgagacctgctcaccaatgagcgggcagatgtgtctgtgattgaggcggtcgcc
aatgaggtgttggcgctggacatgcccacctcgcccacccagctgaaggagctgaccaat
gagatcaaggagaaggtgggcaccctgaccagcgtggagtccatcctcattcagagtgcc
aaggacatccagacagcagagaccctactgcagcaggcccgcactgccagccaggaggcg
tccaatatgaaggagacagctgatctggtgaaggaggccctggagaagactgagcatgcc
cagaatgctgccatcgacgccatcaaacaggccagcaacaacaccaagggaacgcttgac
cttctgacgtccgtggagtcggagacggccgactcggagctgaagctgagtaacaccacg
ctgcgcctgctgcagctggagagagacgtgtctctgctgagagagatcagcctagagagc
agccacaaagctgaacacacccagactgtcactgatctggccaagcaagaggcagaccag
gcccagcaggagtttgagtcggaggtgaaggataagtacagcgtagtggaggagttggtg
gtggacaaggcagagggcgtgtctgacgccaggaagagggcggagcaacttcaggaagag
gccaaagagctgctgtcccagaccagcgacaagctccagagactgcgagagctggagaga
tcttatgaggacaaccagcttcttctggagtccaaggcagagcagctggccgtgctggag
agcaccgcccgtcagttgctcacagacatcagcatgaaggtcaccgtgtacagcacctgc
ctctag

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