Osmerus eperlanus (European smelt): 134038129
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Entry
134038129 CDS
T10927
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134038129 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134038129 (lamb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
134038129
NCBI-ProteinID:
XP_062339729
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All DBs
Position
17:4418698..4435286
Genome browser
AA seq
1781 aa
AA seq
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MLIFHIATILILGCRAVQQLPEFGDVCTEGSCYPATGDLLIGRAHQLTASSSCGMKRPER
FCIVGHLEDEKKCFVCDSRKMYNERTNHTTSHTIENVVTTFAHNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPASMVIERSMDFGKTWQVYRYYSYDCEASFPGVSLGPV
VKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFEIADPYSTRIQNMLKITNIRVKFTQLHT
LGDNLLDSRDEVTKKYYYALYDMVVRGNCFCYGHASKCAPVDRATVDFDGMVHGHCMCNH
YTKGLNCELCQDFYNDQPWKPAEGRNTNACKKCECNQHSGKCHFDLAVYMSTGNVTGGVC
EDCQHNTMGRQCEQCRPFYYQHPHRTLRDPRLCEQCNCDPDGSLQGGVCDARTDVSLGLI
AGQCRCKASVEGERCDHCRQGHYGLGRDPLGCMPCTCNPLGTLPGGNPCDMDSGNCFCKR
LVTGRNCDQCLPQHWGLSMDMDGCRACDCDQGGAIHNNCDPVSGQCVCRDHMFGQRCDQV
ESGFYFIALDHYIYEAEDAKHGPGVTVVPRPYPPLPRSPTWTGMGFVNVPEGAHLEFIIN
NIPESMDYDLLIRYEPQLPQQWEQVNMRVERPVFNPSDLSSLCANSIPGGDQQTVSLPPG
SRHVVLPRPVCLEKGYNYTMRLSLPLYSSLGHVQSPYTLIDSLVLMPRVRELDMFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICNDYIFSVSALLHQGAMACQCDPQGSLSTVCEP
SGGQCRCRPNVVGRNCDHCSPATYLFSPAGCRACGCDPQGSLHAFCQEASGQCECVPGAT
GRHCAHCQPGFWGFPHCRPCHCNGHSEYCHPQTGECQDCRDSTTGQNCERCLSGYHGDPV
LGSGGQCRPCLCPDGPGSGRQFAEGCYHELPSQKLVCACSPGYRGPRCNECAPGYYGNPQ
VPGGRCLPCQCSNNIDMHDPGACDARTGSCLRCLYYTEGSNCHRCKAGYHGNAATQSCRR
CMCFAVGTASQACPAPDECHCDLHSGQCPCQPNVVGKSCDRCAPNTWNLASGAGCQACDC
DPAHSFSSSCSEVTGQCSCRPGFGGRTCRECRELFWGEPKVKCHACDCDPRGIAREQCHK
TTGQCACVEGVTGPRCDQCARGFQGEFPACELCHQCFSAWDRVVGELTNQTRRLDEHVSE
LLTTGVTAPYKETVSSLETSAKAVRDLLENNPAWQQLEEIQQLMLRTTSLVADLNERLNT
TEDTLSRLHGDANQTAASLDALRQGAEDLERSVREIRQQVDNVKNSNIQGAMDSITTAHL
ESRMAEHRANVSTSNPGNTVEESAKLRRAAEDKLSKSQKEFDRKQQRHTQKLEKLAKDLD
AFDLSGLSKQTCGAEGGVEGCDGSPCGGLGCVGEDGTHHCGGEGCEGLVTTSQTALKSSK
DLDQDILTAMQEVDELSRMVWEAKVRADQAKLTAQEVLLKSNRSRERVEQSNQQLRNLIK
EIRDLLTNERADVSVIEAVANEVLALDMPTSPTQLKELTNEIKEKVGTLTSVESILIQSA
KDIQTAETLLQQARTASQEASNMKETADLVKEALEKTEHAQNAAIDAIKQASNNTKGTLD
LLTSVESETADSELKLSNTTLRLLQLERDVSLLREISLESSHKAEHTQTVTDLAKQEADQ
AQQEFESEVKDKYSVVEELVVDKAEGVSDARKRAEQLQEEAKELLSQTSDKLQRLRELER
SYEDNQLLLESKAEQLAVLESTARQLLTDISMKVTVYSTCL
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttgatatttcatatcgcaaccatactcattctcgggtgtcgagctgtccagcagctc
ccggagtttggggacgtttgcaccgagggcagctgctaccccgctactggagacttgctg
atcggccgtgcgcaccagctgaccgcttcctcctcatgcggcatgaagcggccagagcgc
ttctgcattgtcggccacctggaggatgagaagaaatgttttgtgtgtgactccaggaag
atgtacaatgagcgaacgaatcacacaaccagccacaccatcgagaacgtggtcaccacc
ttcgctcacaaccgcctcaaaacctggtggcagtctgagaatggtgtggagaacgtgacc
attcagctgaacttggaagcagagtttcatttcactcacctcatcatgaccttcaagaca
tttcgcccagcgtccatggtcatcgaacgttctatggactttggcaagacgtggcaggtg
taccgttactatagctacgactgcgaagcctccttccctggcgtgtcgctgggacccgtg
gtcaaagtggacgacgtcatctgtgactcgcgctattccgacattgagccgtccacggag
ggagaggtgatatttcgtgtgctggacccagcctttgagatcgcagacccctatagcacc
agaatacagaacatgctgaagataacaaacatacgagtgaagttcacccagctgcataca
ttgggtgacaacctgctggactctcgtgatgaggtcaccaagaagtactactacgctctc
tacgacatggtcgtccgtggcaactgcttctgctatggccacgcctccaagtgtgcccct
gttgaccgtgcaactgtggactttgatggcatggtccatggccactgtatgtgtaaccat
tacactaagggtctgaactgtgagctctgtcaggatttctataatgaccaaccctggaaa
cctgcagaaggacgtaacacaaacgcctgcaaaaagtgtgagtgcaaccagcactctggg
aagtgccacttcgacttggcagtgtacatgtctacagggaatgtgacgggtggggtgtgt
gaggactgtcagcacaacaccatgggccgtcagtgtgagcagtgtcggcccttctactac
cagcacccccacaggaccctgagggacccgcgcctctgtgaacagtgtaactgtgacccg
gacggctcgctgcaggggggggtgtgtgacgcgcggacggacgtgtccctgggtctgatt
gctggccagtgtcgctgcaaggccagcgtggagggagagcgctgtgatcactgcagacaa
ggacactatggcctgggacgggaccccctgggatgcatgccatgtacctgtaacccattg
ggcacgctgccggggggaaacccatgtgacatggactcaggaaactgcttctgcaagcgc
ctcgtcaccggcaggaactgtgatcagtgtctgccacaacactggggtctcagtatggac
atggacggctgtcgagcatgtgactgcgaccagggtggagccatccacaacaactgtgac
ccggtgtcgggccagtgtgtgtgtagggaccacatgtttggccagcgctgtgaccaggtg
gagtctggcttctacttcatagctctggaccactacatctacgaggcagaggacgccaag
cacggacctggagtgaccgtggttccgaggccctacccccccctaccccgcagccccacc
tggacaggcatgggctttgtcaacgtccctgaaggagctcacctggagttcatcatcaac
aacatcccagagtccatggactatgacctgctcatccgctacgaaccgcagttgccccag
cagtgggagcaggtgaatatgagggtggagcggcctgtcttcaacccttcagacctcagc
agtctgtgtgctaactccataccagggggagaccagcagaccgtctctctgcctccaggg
tccagacatgtggtgctgccgaggcctgtttgtctggagaagggctacaactacacaatg
cgtctgagtctgcctctctactcctcgctcggccatgtccagagcccctacacactcatc
gactctttggtgctcatgccgcgggtgcgggagctggacatgtttgagggcagccagggc
gagggagcgtgggacacgttccagaggtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgaccgacatctgcaacgactacatcttcagcgtgtccgccctgctgcac
cagggagccatggcgtgccagtgtgacccccagggttccctcagtactgtgtgtgagccc
agcggcggccagtgtcgatgtcgccccaacgtggtgggcaggaactgtgaccactgttct
cccgccacctacctgttcagcccagcaggctgcagagcctgtggctgtgatccccagggc
tcgctccatgccttctgccaggaggcctcaggtcagtgtgagtgtgtgccaggggccaca
gggcgtcattgtgcccactgccagccaggcttctggggattcccacattgccggccctgc
cactgcaacgggcacagcgagtactgccacccccagactggagaatgccaggactgcaga
gactccaccaccgggcagaactgtgagaggtgtctgagtggttaccacggtgacccggtc
cttggttctggtgggcagtgccgcccgtgcctctgccccgacgggcccgggagcggacgg
cagtttgcagaaggatgttaccatgagctcccctcccagaagctggtgtgtgcctgcagc
ccgggatacagaggacccaggtgtaacgaatgtgcccctggttactacggtaacccccag
gtgcccggagggcgctgtctgccgtgccagtgtagcaacaacatcgacatgcacgacccg
ggcgcctgcgacgcccggacgggctcctgccttagatgcctgtactacacagagggctcc
aactgccatcgctgcaaagcgggttaccacggcaacgcagccacccagagctgcagaagg
tgtatgtgcttcgctgtgggtacggcatcgcaggcctgccctgctccggacgagtgtcac
tgtgacctgcacagtggccagtgcccctgccagcccaacgtggtgggtaagagctgtgac
cgctgtgctcccaacacctggaacctagccagcggagcgggctgccaagcctgcgactgt
gaccccgcccactccttcagctcctcctgcagtgaggtgacagggcagtgctcatgcagg
cctgggttcggaggcaggacctgtagggagtgcagagagctgttctggggagagccaaag
gtcaaatgtcatgcgtgtgactgcgacccacgcggcatcgccagagagcagtgccacaag
accacgggccagtgtgcgtgcgtggagggcgtgacgggccccaggtgtgaccagtgtgcc
cgcggcttccagggggagttcccagcctgcgagctctgccaccagtgcttctccgcctgg
gaccgcgtggtgggggaactgaccaatcagacgcggcgactagatgagcatgtgagcgag
ctcctgaccactggggtgacggcgccctacaaggagacggtgagcagcctggagaccagc
gccaaggctgtcagagacctgctggagaacaaccctgcctggcaacagctggaggagata
cagcagctgatgctacggaccacgtcgctggtggcagacttgaacgagaggctgaacacg
acagaggacaccctctctcgtctccacggcgatgccaaccagaccgccgccagtctggac
gccctgaggcagggggccgaggacctggagcgctccgtcagagagatccggcagcaggtg
gacaacgtgaagaactccaacatccagggagcgatggacagcatcaccaccgcccacctg
gagtctcgcatggcggagcaccgggccaacgtctccaccagtaaccctggcaacacagtg
gaggagtctgcaaagttgcggcgcgccgcagaggacaaactgagcaagagccagaaggag
ttcgaccggaagcagcagagacacacgcagaaactggagaagctggccaaagacctggat
gctttcgacctatcgggactcagcaagcagacgtgcggtgctgaggggggtgtggagggg
tgcgatgggtccccctgtggaggtctgggatgcgtgggggaggacggcacacaccactgt
gggggtgagggctgtgagggcctggtcacaacatcacaaaccgccctgaaatcctccaag
gacttggaccaggacatcctcactgccatgcaggaagtggacgagctctccaggatggtg
tgggaggcgaaggtgcgtgcagaccaagccaagctcactgctcaggaggtgctgctcaag
tccaaccggagcagagagagagtggagcagagcaaccagcagctgcgcaacctcataaag
gagatacgagacctgctcaccaatgagcgggcagatgtgtctgtgattgaggcggtcgcc
aatgaggtgttggcgctggacatgcccacctcgcccacccagctgaaggagctgaccaat
gagatcaaggagaaggtgggcaccctgaccagcgtggagtccatcctcattcagagtgcc
aaggacatccagacagcagagaccctactgcagcaggcccgcactgccagccaggaggcg
tccaatatgaaggagacagctgatctggtgaaggaggccctggagaagactgagcatgcc
cagaatgctgccatcgacgccatcaaacaggccagcaacaacaccaagggaacgcttgac
cttctgacgtccgtggagtcggagacggccgactcggagctgaagctgagtaacaccacg
ctgcgcctgctgcagctggagagagacgtgtctctgctgagagagatcagcctagagagc
agccacaaagctgaacacacccagactgtcactgatctggccaagcaagaggcagaccag
gcccagcaggagtttgagtcggaggtgaaggataagtacagcgtagtggaggagttggtg
gtggacaaggcagagggcgtgtctgacgccaggaagagggcggagcaacttcaggaagag
gccaaagagctgctgtcccagaccagcgacaagctccagagactgcgagagctggagaga
tcttatgaggacaaccagcttcttctggagtccaaggcagagcagctggccgtgctggag
agcaccgcccgtcagttgctcacagacatcagcatgaaggtcaccgtgtacagcacctgc
ctctag
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