Osmerus eperlanus (European smelt): 134038554
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Entry
134038554 CDS
T10927
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134038554
04518 Integrin signaling
134038554
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134038554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oep00536
]
134038554
Glycosaminoglycan binding proteins [BR:
oep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134038554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_3rd
FN3_Tor_3rd
DUF7949
Fn3_Dep-1_2nd
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
134038554
NCBI-ProteinID:
XP_062339979
LinkDB
All DBs
Position
18:3094193..3134548
Genome browser
AA seq
2373 aa
AA seq
DB search
MGPKSLLGYLLLTALISMSHTGLVKKMLRHRRATLTQAGDNVTLPSADQPVVFNHVYNIN
VPASSLCSADLESPGGSQLEPRDAPAFSGLRTTDHTLDGENQIVFTHRINIPKQACGCSD
GHQDLKDLLSRLEMLEGEVSSLRDQCSGAAGCCSAQVTGEVGTKPYCNGRGNFSADSCGC
VCEPGWKGANCSEPECPNDCQDQGRCVDGKCVCFKGFAGEDCTLEVCPVDCGENGQCQGG
GCVCSEGFSGDDCSQTDCLNNCLGRGRCVDGECRCEEPWTGFDCSELICPNDCYDRGRCI
NGTCYCDEGFTGEDCGERTCPDNCNGRGVCVDGECECSPGYSGEDCSKLTCLNDCNERGS
CFNGMCICDSGYQGEDCSQLACPNNCNTRGQCINGQCACDVGFQGYDCSEISCPNNCLDR
GRCVNGQCVCNEGFAGEDCSLKTCPSNCYGRGECQDGRCVCYAGFVSEDCSELACPNNCL
NRGRCIDGQCVCDEGFNGEDCGTKACPNDCLGRGYCADGNCVCQEGYSGLDCSVLTCPDN
CNGRGRCVNGKCICEAGYMGLNCGELSCLNNCQDRGRCVDGQCVCDEGYIGDDCSEVSPP
KDLSVTEITTETVDLNWTNDMLVTEYLVTHVPTAPGGLYQEFTVPGDKTSATLTELEPGI
EYLINVYAILSNKRSIPVSARVATYIPQPEGLKFKSVRDTSVEVIWDQLDIPFDNWELQI
QNTKEENGKILNTLPPAQTTFDQTGLGPGQEYQVSIGIVKNNTRGPQLTKTFTTRIDGPQ
QVEVKDVTESSALVAWSQPVAQTDRLTLSYRPSSDASQRTTVELSPADKQYNIEALSPDT
EYEISLTSGRGDMTSEPVLETFTTGLDSPRKLEPLSQTDDSITLEWRNSQADVDSYRVKY
SPFSGGSHGEELIPRSPGGTTRATITGLKPGTEYGIGVTGVKKERESLPSTTNAATDLDA
PKDLEMSESTETTMNLVWRRPRAKISLYKLVYISRAGRREEVQVPGTATSYVLTNLTPGM
IYTISLTAERGPKKSAPATLSASTASFTFYLADPVPELTTPAGSEDNIINFVSLDASDPQ
FSEMGSGDELGPLTVSGVTSTGFDLSWEPKPHFVFDSYAVECRDALGLYDMKEVRLRGDA
TAAVIKGMKASTEYRVKLYGVTNNQRSSPLEAVAVTAPKSTSPDVIALSVKDVSTLQSAP
DIRAGAISPRLIAPTTPSRIPPSGSFTSEPEGSSMDTPGLGELQVTGVTPNGLSLDWAAP
EHTFDSFVVELNALSGEAQAHGVTVPGGMRKVHVQGLSPKTHYEVTLYGMVEGQRSLPLT
AFANTEELKPQVVNLTISDITWDSFTVSWSPQDGDFESFVLEMTNLDGGSESQNLTLSGD
AFSLSIPGLRPNTTYMVGLYGLHQGSFLEPVYAEATTVSEPVVGNLYVSNLTSESFSISW
NGTDGQLDGYILEVIDSSWLSEPEEHNISHNAMSHDLTGLRPSTDYIAYLYGIVKGSRTK
AVSTVASTAAEPDLSRLVVSNVTSDRLSLSWRTGEQTFDNFVVELRESAVPSTAMGRAVP
GETRSTVMTGLKGSTGYNIKLYASSGGRNTKPLFAVATTEPVPQLSAIAVSDVNPDNLTL
SWSKVAGHFDGFVIRVSDKEQLLDTLELRPPGQVQNVTVTGLQDDTAYDIELYGISHGHR
TPSLLTNVVTAPLPTVKNLTVSDVTPYGFRVSWEASGQQEGTTGGGFSHFQIVISDSGWL
LEPQEISVPGNQSQLDVWGLITGIGYEVKLTGVSRSGLLSRPLTTVAVTEAEPEVEHMFV
SDITDESLRLAWTADEDLFDRFVIKIRDIRKTTHPQEFHAFGDERTKVLTGLTGGTEYEI
ELFGVTLERRSQSMFGVARTGMASPRGIHFSEVTDTSAVVHWTTPRTRVDSYRIIYLPLM
GGSPLTVTADGTESKALLPSMTPGATYQVTVIAVKGLEESDPGTDTVTTALDRPQGLTAV
NVTDTSALLLWQPAVATVDGYVITYSAESESPVIEHVSGNTVEFEMGSLVPATQYTVGVY
AMRDAQKSASATTEFTTDVDDPRDLAASNILTDSATLTWKPPRAVITGYVLTFSSADGIV
REVVLSPTATSYSMNQLTGSTEYSVRLQAIAGAQRSHRVNTVFTTIGVLYKLPRDCAQAF
LNGETTSGLYTIYLGGDESQPIQVYCDMTTDGGGWMVFVRRQNGKLEFFRNWKNYTLGFG
DMNDEFWLGLANLHKITSAGQYELRVDLRDGGEEVYAKYDKFTISEPRSRYKVHIGTYSG
TAGDSMTYHQGRPFSTFDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSHSKGIN
WFHWKGHEHSVPFAEMKIRPVNFGNFESRRKRS
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaaaaagccttctaggctacctcctcctgactgccctcatcagtatgagccac
acgggcctggtgaagaagatgcttcggcatcgacgagccacactgacacaggccggagac
aacgtcaccctgcccagcgcggaccaaccggtggtgttcaatcacgtctacaacatcaac
gtccccgccagctccctgtgctccgctgacctagaatcccccgggggcagccagctggag
cccagagatgcacctgcgttctcgggccttcgcaccaccgaccacaccctggacggagag
aaccagatcgtcttcacccaccgcatcaacatccccaagcaggcctgtggctgctccgat
ggtcatcaagacctgaaggacctccttagcaggctggagatgctggagggggaggtgtcc
tcgctgagggaccagtgctctggagctgctgggtgctgtagtgctcaggtcacaggtgag
gtggggactaagccgtactgcaacggccgtggcaacttcagtgcggattcgtgcggttgc
gtttgtgagcctggctggaagggagccaactgcagcgagcctgaatgccccaatgactgc
caggaccagggtcggtgcgtagacgggaagtgcgtttgcttcaagggcttcgccggggag
gactgcactctggaagtttgcccagtggactgtggagagaacggccagtgtcagggtgga
gggtgtgtctgttccgaaggattcagcggtgacgactgctctcagacagactgtctgaac
aactgcctgggccgtgggcgctgcgtggacggagagtgcaggtgcgaagagccttggacc
ggattcgactgctccgagctcatatgccccaacgattgttacgaccgtggccgctgcatc
aacggaacctgctactgcgacgaaggtttcaccggggaagactgcggggagcgcacctgt
cccgacaactgcaacggccgtggtgtctgcgtggacggagagtgtgagtgcagccccggc
tactctggagaagactgctccaagctcacttgcctcaacgactgcaacgagcgaggcagc
tgtttcaacggcatgtgcatctgcgactctggctaccaaggagaggactgcagccagctg
gcctgccccaacaactgcaacaccagagggcagtgcatcaacggccagtgcgcctgcgac
gtaggcttccaaggatacgactgctccgagatctcctgccccaacaactgcctcgacagg
ggacgctgcgtcaacggccagtgcgtgtgcaacgaaggcttcgccggcgaggactgcagc
ttgaagacctgtccctccaactgctacggccgcggcgagtgtcaggacggccgctgcgtg
tgctacgccggcttcgtcagtgaggactgcagcgagctggcctgccctaacaactgcctg
aaccgcggacgctgcatcgacgggcaatgcgtctgcgacgagggtttcaacggggaggac
tgcggcacgaaggcgtgtcccaacgactgtctgggccgtgggtactgcgcggacggtaac
tgcgtctgccaggaggggtactcggggctcgactgctctgtgctcacctgtccggataac
tgcaacggtagagggcgctgcgtcaacggaaagtgtatatgcgaggctggctacatggga
ctgaactgtggagagctgagctgcctcaacaactgccaggacagagggcgttgtgtggac
ggacagtgtgtctgtgacgaggggtacatcggtgacgattgctcggaagtctctcctccc
aaggacctgagtgtaacagaaatcaccacagagacggtggacctgaactggacaaacgac
atgttggtcacagaatacctggtgacccacgtccctacagccccaggaggactgtaccag
gagttcaccgtaccaggagacaagacatctgccaccctcacagagctggaacctggcatt
gagtatctgatcaacgtctacgccatcctgagcaacaagaggagcatccctgttagtgcc
agagttgccacatatatcccccagccagagggtctgaagttcaagtcggtgagggacact
tccgtggaggtgatttgggaccagctggacattccctttgataactgggagctccaaatc
caaaacacgaaagaagagaatgggaaaatcctgaacacacttccacctgctcagactaca
tttgatcagactggtcttggacctggtcaggagtatcaggtctccattggcatcgtcaag
aacaacaccagaggaccccagttgaccaaaacgtttactaccaggatcgacggaccacag
caggtggaggtgaaggacgttacggagtcgtccgccctggtcgcctggtcccagcccgtg
gcccagacggacagactgaccctgtcctacagacccagctcagacgcctcccagaggacc
accgtggagctctcacctgcggataaacagtacaacatcgaagctttaagccccgacaca
gagtacgagatctctctgacatccgggagaggagatatgactagcgagcccgtccttgaa
accttcaccacaggtctggattcccccaggaagctagagcccctgagccagacagacgac
agcatcaccctggagtggagaaacagccaggcagatgtagacagctacagggtcaagtac
agccccttctctgggggttcccacggcgaggaactcatcccacgcagccctggaggcacc
acccgggccaccatcactggactgaagccaggtacagagtatgggataggagtgaccggt
gtgaagaaggagagagagagccttccttccaccacaaacgcagctactgacctagacgca
cccaaagacctggagatgagtgagtccacagagaccaccatgaatctggtgtggagaaga
ccccgggccaagatcagcttgtacaagctggtgtacatctccagggctgggcggagggag
gaggtgcaggttcctggaacagctaccagctatgtcctgaccaacctgactcctggcatg
atctacaccatcagcctaactgctgagagaggacccaagaagagtgcacctgccacttta
tctgcctccacagcctcatttacattttatttagctgacccagtccctgagcttacaact
cccgctggttcggaggacaatatcattaactttgtgtctttagacgcctcagatccccag
ttctccgagatggggtctggggacgagttgggaccgttgactgtctcaggtgtaacatcc
actggatttgacctctcatgggaaccaaagccacattttgtgtttgatagctatgccgta
gaatgtagagacgctctgggattatatgatatgaaagaggttcgtcttcgtggtgatgcc
actgctgctgtaatcaaaggcatgaaggcatccacagaatatcgagtaaagctttacgga
gtaaccaataaccaaaggtcctcaccacttgaagcagttgcagttacagcacccaagtct
acctcacctgacgtaattgctctaagtgtcaaagacgtttcaactctccagtccgctcca
gatataagagctggagctatcagtcccagactcatagccccgactactccatcccgcata
cctccttctgggagctttacctccgaaccagagggctcaagcatggacacgcctgggctg
ggggaacttcaggtcaccggcgtgacccccaatggcctgagcctagactgggctgcacct
gagcacacgtttgatagcttcgtggtggagctgaacgccctgtcaggagaggcgcaagct
cacggggtaacagtgccaggaggtatgaggaaggtccacgttcaaggcttgtcccctaag
acgcactatgaggttactttgtatgggatggtggaggggcagcggtctctgcctctcaca
gcttttgccaacacagaggagctgaagccccaggtggtgaacctcaccatctctgacata
acctgggacagcttcactgtgtcctggagtccccaggacggggactttgagagctttgtc
ctagagatgacaaacctggacgggggttcggaaagccaaaacctcacgttgtccggggac
gccttcagcctgtctatccccgggcttaggcccaacaccacctacatggtgggtctgtac
ggcctacaccagggctccttcctggagcctgtgtatgcagaggccaccacagtgagcgag
ccagtggttggcaatctttatgtgtctaacttaacatctgagagcttctccatctcctgg
aatggcactgatggacagttggatggttacatcctagaagttattgactcaagctggctg
agcgaaccagaggaacataacatatcccacaatgcaatgtcccatgacctcacagggcta
aggcccagcactgactatatagcctacctctatgggattgtcaaaggatcgcgaacgaaa
gctgtcagtactgttgcgtcaacagctgcggagcctgacttgtccaggctggttgtatct
aacgttacctcagaccgactatccctgtcttggagaacgggggaacagacatttgataac
tttgtagtcgagctcagagagtctgctgtgccctctacagccatggggcgcgctgtcccc
ggggagacccgatccacagtcatgacagggcttaaagggagcaccggctacaacattaaa
ctgtacgccagctctggcggccgtaacacaaagcctctgttcgctgtagctaccacagaa
cctgtcccacagttgagcgccatagctgtgtccgatgtaaacccagataacctcaccctt
tcctggagcaaagtggcaggccactttgatggctttgtcatccgggtcagtgacaaggag
cagctgcttgacacactagagttgcggcccccgggccaggtccagaacgtgaccgtcact
ggtctacaggatgacactgcctatgacattgagctgtatggtatctctcatggccaccgt
acaccttccctcttaaccaatgtggtcacagctccgctacccacagtgaaaaacctgacc
gtttcggacgtaactccgtatggcttccgtgtctcctgggaggccagcgggcagcaggag
gggactactggtggcggcttcagccactttcagatagtgatttcggactcgggctggctg
ctggagccccaggagatctcagtcccgggcaaccagagccaactggatgtctggggtctg
atcactggcataggctatgaggtcaagctgaccggggtgtctaggtctggacttctctct
cggcctctgaccacagtggctgtgacagaggcagagccagaagtggagcacatgttcgtc
tcggacatcacagatgagagtttgcgactcgcgtggactgctgatgaagacttgtttgat
agattcgtcatcaaaatcagagacatcagaaagacaacgcatccgcaggaattccacgcc
ttcggtgacgagagaaccaaggttttaacgggccttaccggtggcaccgagtatgaaatt
gaactctttggcgtcactctggaacggcgctcccaatcaatgtttggtgttgcccgaaca
ggcatggcctctccaaggggcatccacttctcggaggtgaccgacacgtcagccgtggtt
cactggaccacgccacgcacccgagtggatagctatcgcatcatctacctaccactcatg
ggaggtagtccattgacagtgactgctgatgggacagagtccaaggccctgcttcctagc
atgacgccaggtgcgacctaccaggtgacggtgatagccgtgaaaggtctggaggagagt
gacccagggacagacacagtgaccacagctctggacagaccccagggtctgactgctgtc
aacgtcacagacacgtccgccctgctgctatggcaaccggctgtagccacagtggatggc
tatgtcattacctacagtgcagaatcagagtccccagtgatcgagcatgtctctgggaac
acggtggagtttgagatgggctccctggttcctgccacccagtacaccgtgggggtctac
gccatgagggatgcccagaaaagtgcctcggccaccacagagttcaccacagacgtggac
gatcccagggacctggcagccagtaacatcctgacggacagtgccaccctgacctggaag
ccccctcgcgctgtcatcacaggctacgtcctgaccttctcgtcagccgacggcatcgtc
agggaggtagtgctaagcccgacagccacctcgtacagtatgaaccagctaacaggatca
acagaatacagtgtcagactgcaggccatcgctggtgcccagaggagtcatcgagtcaac
actgtcttcaccaccattggagtgctgtacaaactacccagagactgcgcccaggccttt
ttaaatggagagaccacctcaggcctgtacaccatctaccttggtggagatgaaagccag
cccatacaggtgtactgtgacatgaccacggatggaggaggatggatggtgttcgtgagg
cggcagaatggaaagctggagttctttaggaactggaagaactacacccttggcttcggt
gacatgaacgatgagttctggcttggtctcgccaacctccacaagatcacgtccgctggc
cagtacgagctgcgtgtggacctgagggatggaggggaggaggtgtacgccaaatatgac
aagttcaccatttcagagcctcgctccagatacaaggtccacataggaacctacagtgga
actgcaggtgactccatgacttaccaccagggccgccccttctccaccttcgacaacgac
aacgacattgccgtcaccaactgtgccctgtcctacaagggtgcattctggtacaaaaac
tgtcatcgcgtcaacctcatggggaaatacggcgacagcagtcatagcaagggtatcaac
tggttccattggaaggggcacgaacattccgttccgtttgccgagatgaagatcagaccg
gtgaacttcggaaactttgaaagcaggcggaaacgatcatag
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integrated database retrieval system