Osmerus eperlanus (European smelt): 134038557
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Entry
134038557 CDS
T10927
Symbol
prf1.3
Name
(RefSeq) perforin-1.3
KO
K07818
perforin 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134038557 (prf1.3)
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Motif
Pfam:
MACPF
C2
EGF_PRF1
RecE_M
Motif
Other DBs
NCBI-GeneID:
134038557
NCBI-ProteinID:
XP_062339989
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Position
2:complement(23220570..23223195)
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AA seq
561 aa
AA seq
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MPSLPLLLLLLLFTPPSRGCHTGTFTECHAAQFVPGHNLVGEGFDIVKMQTSGAYVVDVR
NFMDGSGHNANCTLCHNRLMNQTQKLPLSVVDWRIKVLCRRSLSSKMFESSMSVVKESST
STSVSWKVGLGLPKVGGVAVGGTHSKSSSFAQSHSRKDKYSFTSHEFKCKYYTFRLHSTP
PLGKEFQEALKNLPTTIEPKSHKAYDHFLSIFGTHYIRRVDLGGRVHSTTAVRTCQASMN
GLSTHSVSNCLGVEASAVIKGIEIKASTEYCKTQSKKLKTGLSFSGTFSDRVTEVQGGNG
EVADLLFQPGKQSNYKKWLASLKTLPGMVSYQLSSLHTLVRNNPILESNLRTAIRDYIMR
NAISTACPSGCSMGRRNKNCACSCSGHSRVNSNCCPTKPGIGRMNVTVVRATGLWGDYIS
KTDGYVKVFYGNQGDTTPVIWNNDFPAWNFKIHFGTVELGSRTPVKFEVWDRDSVWNDDH
LGTALIIPTQGVNVSKMFKLKHGSLYVTMSVVCGPSLKGSLCIDYSPSPSSLDGLPDAGD
PGGDVGTSFQQGPAARNSTFL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccttcctctgctcctcctcctcctcctcttcacccctccgtccagaggctgc
cacacgggcaccttcaccgagtgccatgcggctcagttcgtccccgggcacaacctggtg
ggcgagggcttcgacatcgtcaagatgcagacgtccggcgcctacgtggtggacgtcagg
aacttcatggacggcagcggacacaatgccaactgcacgctgtgccacaacagactgatg
aaccagacacagaagctgcccttgtcggtggtggactggcgcatcaaggtgctgtgccgt
cgcagcctgagcagcaagatgttcgagtcgagcatgtccgtcgtgaaggagagcagcacg
tccaccagtgtgagctggaaggtcggtctgggacttccaaaggtgggaggagtggcagtt
ggaggaacacactccaagtcgtcctcgttcgcccagagtcactcccgcaaggacaagtac
tccttcacatcccacgagttcaaatgcaagtattacacctttcgtctccacagcacccct
cctctgggcaaagagtttcaagaagctctgaagaaccttcccaccaccatcgaaccgaag
agccacaaagcttacgaccacttcctctccatcttcggcacccattacatccgcagggtg
gacctgggggggcgcgtgcactccaccacggccgtgcgcacctgccaggcctccatgaac
ggcctctccacccactctgtcagcaactgcctgggcgtcgaggccagcgccgttatcaag
ggcatcgaaatcaaagcatcgaccgaatactgcaaaacccagagcaagaagctcaagaca
ggcctgagcttctcggggactttctccgaccgcgtcaccgaggtccaaggcggcaacgga
gaagttgcggacctcctgttccaacccggtaaacagtccaactacaagaagtggctcgca
tctctgaagacacttcccggaatggtctcctaccagctgagctctctgcacacgctggtg
aggaacaaccccatcctggagtcgaacctgcgcactgccatcagagactacatcatgcgc
aacgccatttccaccgcctgtccgtccgggtgcagcatgggccggcggaacaaaaactgt
gcgtgttcgtgcagcgggcacagtcgggtgaactccaactgctgccccaccaagccgggc
atagggaggatgaacgtgacggttgtccgggcgacggggctctggggggactacatttcc
aaaacggatggttacgtgaaggtgttctacggcaatcaaggagacaccactccagtgata
tggaacaatgacttccctgcgtggaatttcaagatacactttgggacggtggagttgggg
agcagaacacctgtgaagtttgaggtgtgggaccgcgacagcgtttggaacgacgaccac
ctgggcactgcgttgatcatccccactcagggcgtgaacgtcagcaagatgttcaagctg
aaacacggctctctgtacgtgacgatgtctgtggtctgcgggcccagcctgaagggctct
ctgtgcattgactactccccctcccctagttccctggatgggctgcctgacgccggggac
cctggtggggacgtggggacctccttccagcagggccctgctgcccgcaactccaccttc
ctgtga
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