Osmerus eperlanus (European smelt): 134038567
Help
Entry
134038567 CDS
T10927
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134038567 (ddx56)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
Pre-60S particles
Helicases
134038567 (ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134038567
NCBI-ProteinID:
XP_062340005
LinkDB
All DBs
Position
18:complement(2029559..2036400)
Genome browser
AA seq
576 aa
AA seq
DB search
MADKLQFHEMGLDDRLLKALADLGWAQPTLIQERAIPLALEGKDLLARARTGSGKTAAYA
VPVIQRILASKLSVREQAVRALILVPTKELGQQVQIMIRQLTAFCARDVRVADVSGKADL
SAQRPVLMEKPDVIVGTPSRVLAHLKAQNLVLHSSLETLVIDEADLLFSFGFEADLKSLL
CHLPKIYQSFLMSATFSEDVEALKELVLHNPVILKLQGSQLPDSSQLQQYSVQCEEEEKF
LLIYTLLKLHLVQGKTLVFVGAVDRCYRLKLFLEQFSIPACVLNSELPVQSRCHIITQFN
QGFYDYIIATDEQGLADPTAAPQTTDGKGKKKKKKKNAGKGGRVKDKEYGVSRGVDFQNV
ANVINFDFPDSVESYIHRVGRTARADNLGSALTFVTHTQLALLKEVEDALTGDNAESAVK
PFGFKMEEIEGFRYRCRDAMRSVTKQAVREARLKEIKQELLNSEKLKTYFEDNPRDLQLL
RHDKDLHPAIIKPHLKNVPDYLIPPMLRGVANSFSGKRKKRRNDKPKPAGVIKTPFKKNL
RGKNPLKTFRFTGGASKGVGRGASKGAGRGAKTGKH
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagttgcagttccatgaaatgggtttggatgatcgcctcttaaaggcgctc
gcagacttgggctgggctcaaccaaccttgatccaggaaagagccatccctctggcttta
gaaggaaaggaccttctggctcgagccaggactgggtcgggtaaaacagctgcgtacgcc
gttcctgtcatacagcggatccttgcctctaaactgagtgtccgcgagcaggcagtgagg
gctctaatcctggtgccaacgaaagagctaggccagcaggttcagattatgattcgtcaa
ttgacggccttttgcgccagggatgtccgcgtggctgatgtctccggcaaggctgatctg
tcagcccagagacctgttctgatggagaagcctgacgtgattgtggggaccccgtctcgt
gtcctggcccacctaaaagcccagaacctggtcctgcactcgtccctggagaccctggtc
atagacgaggcggaccttctgttctccttcggcttcgaggccgaccttaagagcctgcta
tgtcacctgcctaagatctaccagtcattcctgatgtctgccacattcagtgaggatgtc
gaggccttgaaggagctggtgttgcataacccagtgatcctcaagctccagggctcccag
ctcccagacagcagccagctgcagcagtacagcgtgcagtgtgaggaggaggagaagttc
ctgttgatatacaccctgctgaagctgcacctggtgcaggggaagaccctggtgtttgtg
ggagcggtggacaggtgctacagactcaaactgttcctggaacagttcagcataccagcc
tgcgttctcaactctgagctgcccgtccagtccaggtgtcacatcatcactcagttcaac
cagggcttctacgattacatcatagccacggacgagcagggattggctgatcccaccgca
gcaccacagaccaccgatgggaaagggaagaaaaagaagaagaagaagaacgcagggaaa
ggaggaagagtcaaggacaaggagtatggggtctccagaggagtcgacttccaaaacgtc
gctaacgtcatcaacttcgacttccccgattcagtagaatcctacatacatcgagtggga
cgaacggccagagcagacaacctcggctcagcgctcacattcgtcactcacacacagctg
gcgctcctgaaggaggtggaggacgccctcactggagacaacgctgaatccgcggtgaag
ccttttggattcaagatggaggagatcgagggcttcaggtacaggtgtcgggatgccatg
cggtctgtaaccaagcaggcagtgagagaggccagactgaaggagatcaaacaagaactg
ctcaactcagagaaactaaagacgtactttgaggacaatccccgagacctgcagttgctg
agacatgacaaagatttgcaccctgctataataaaaccccatctgaagaacgtcccagat
tacctcattccaccgatgctgaggggtgtggccaactctttctcgggaaagaggaaaaag
aggagaaacgacaaaccaaaaccagcaggtgtcataaagactccctttaaaaagaacctc
agaggcaagaatcccctgaagactttccgcttcaccggaggggccagtaaaggggttggt
cgaggggcaagtaaaggggctggtcgaggtgccaagaccggcaaacactag
DBGET
integrated database retrieval system
