Osmerus eperlanus (European smelt): 134038716
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Entry
134038716 CDS
T10927
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134038716 (ddx54)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
Pre-60S particles
Helicases
134038716 (ddx54)
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GFIT
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NCBI-GeneID:
134038716
NCBI-ProteinID:
XP_062340235
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Position
18:382735..390773
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AA seq
897 aa
AA seq
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MAQRKKKFTKKKRHVGHKDPEVDSDLELATEIKDDDTTVRKLPRFPASSECLSDVEPDTR
ELVRAQNKKKKKSGGFQSMGLSYPVYKGVMRKGYKVPTPIQRRTIPVVLDGKDMVAMART
GSGKTAAFLIPMFEKLKAPSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILG
GDRMDDQFAALHENPDIIIGTPGRLMHVVVEMNLKLQNVEYVVFDEADRLFEMGFAEQLQ
EVIRRLPDTRQTLLFSATLPKMLVEFARAGLTEPVLIRLDVDSKLSEQLKLSFFHLRLED
KPALLLHLLRNVARPQEQTVVFVATKHHVEFLRELLSAEGVECAYIYSALDQTARKINIG
KFVHRKAMVLLVTDVAARGIDIPLLDNVINYNFPSKPKLFLHRVGRVARAGRGGVAYSLV
CSDEVPYVYDLHLFLGRPVTLASADMPQDTDGAFGRVPQSILDDEESLLTSALQSSLDLQ
NLQHISSNAYQGYLRSRPLPSPESIKRVKNTDLFSLAVHPLLGSGLDRLELDRLQMVDSI
KSYRSKATIFEINCSSRCQGSEVMRAKRSRDAVLVDKFSRKRQERAAESELHPSAPPAPR
LQQDHTQGEDDQELQGVFSQVLGGKRRKQDDGDTERPKSKKSKQAVRDEEHYVPYRAQDL
HTERGLSMTGEGTTFEQQASTAVLDLMGDEEGRLNQHKHMMKWDRKRKRFVRETGKEDSK
KRVKLETGQMVSKIHKKNFYEDWKKKYKVDDEDADSGGETGGRGRRGGGGRGRGGGRGRG
GGRGGGGRGGGGWGGGREEWSGGGRGRGGWGGGREEWSGGGRGRRGADSSGPPQRARSEL
RSRDQILKERKRKEKQNFLQSGGMKKIKGRGQQRLNDVKSSGFGRGVHKKGKMKKKM
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaagaaagaagaaatttacgaagaaaaagagacatgttggccataaagatccc
gaagtggactcggacttggagctcgctactgaaattaaggacgatgataccaccgtgagg
aagttacctcgcttccccgcctcctccgagtgcctgtctgatgtggagccagacacaagg
gagctggtcagagcgcagaacaagaagaagaagaaatctggagggtttcagtccatgggt
ctcagttacccggtctacaaaggagtcatgaggaagggctacaaggttcctacgcccatc
cagcgccggacaatcccagtcgtcctggatggcaaggacatggttgccatggcgcggacg
ggcagtgggaagaccgcagcgttcctgatccccatgtttgagaagctgaaggcccccagc
gcccagaccggagcccgtgccctcatcctgtcccccactagggagctggctctgcaaacc
atgaagttcaccaaggagttggggaagttcacggggctgaagacggctctgattctggga
ggagaccggatggacgaccagtttgctgcccttcatgaaaatccagacataatcatcgga
acccctggtcgcttgatgcacgttgtcgtggagatgaacctgaagctccagaatgtggag
tatgtggtgtttgacgaggcagacaggctgtttgagatgggctttgcggagcagctgcag
gaggtgatccgcaggctcccagacaccaggcagacgctgctgttctccgccaccctgccc
aagatgctggtggagttcgcccgagcagggttgacagagccggtgttgatacgtctggac
gtggacagcaagctgagtgagcagctgaagctgtccttcttccacctgcgtctggaggac
aagccggccttgctgctgcacctgctcaggaacgtggcccgaccacaggagcagacagtc
gtgttcgtggccaccaagcaccacgtcgagttcctgagagagcttctgagtgcggagggg
gtggagtgtgcgtacatctacagtgctctggaccagacggccaggaagatcaacatcggg
aagtttgtccaccgcaaagccatggtgctgctggtcaccgatgtggctgctcgcggcata
gacatccccctgctcgacaacgtcatcaattacaacttcccctccaagcccaagctgttc
ctgcacagagtcggtcgcgtggcgcgtgcgggccgggggggcgtggcctacagcctggtg
tgttcagacgaggttccctacgtgtatgacctccacctgttcctgggacgacctgtgacc
ctggcctccgccgacatgcctcaagacactgacggggcgttcggccgcgtcccccagagt
atccttgacgacgaggagtccctgctgacctctgccctccagagctctctggatctccag
aacctccagcacatctcgtccaacgcctaccaggggtacctgcgctcgcggccgctgccc
tcgcccgagtccatcaagagggtgaagaacacagacctcttcagcctggcggtgcacccc
ctgctgggatccgggctggacagactggagctggatcgtctacagatggtcgattccatc
aagagctacagatcgaaagctacgatctttgagatcaactgtagcagccgttgccagggc
agcgaggtgatgcgggcgaagcgcagcagagacgctgtcctggtggacaagttctccagg
aagagacaggagcgggcggccgagagcgagctgcacccctccgccccgcccgccccccgc
ctgcagcaggaccacacccagggagaagacgaccaggaactacagggggtgttctcccag
gtgctgggggggaagaggaggaagcaggatgacggagacacagagaggccaaaaagcaaa
aagagcaaacaggctgtgagagacgaggagcactacgtcccctatagagcccaggacctg
cacacagagcgagggctcagcatgacaggagaaggaaccacgtttgagcagcaggcctcc
acagctgtgctggacctgatgggagatgaggagggacgcctcaaccaacacaaacacatg
atgaagtgggaccgtaagaggaagcgtttcgtcagggagacggggaaggaggactccaag
aagagggtgaagctggagacgggacagatggtcagcaagatccacaagaagaacttctat
gaggactggaagaagaagtacaaggtggatgatgaggatgctgactcaggaggagagact
ggaggaagagggaggagaggaggagggggaagaggacgagggggagggagagggcgagga
ggagggagaggaggaggagggagaggaggaggaggatggggtggaggaagagaagagtgg
agtggaggaggacgaggaagaggtggatggggtggaggacgagaagagtggagtggagga
ggtcgaggcaggcgcggcgccgattcctccggccccccccagcgagcacgctctgagctg
cggagccgtgaccagatcctgaaggagaggaagaggaaggagaagcagaacttcctgcag
agcggcgggatgaagaagatcaaggggcggggccagcagaggctcaacgacgtcaagtca
tcaggcttcggacgaggggttcacaagaagggcaagatgaagaagaagatgtaa
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