KEGG   Osmerus eperlanus (European smelt): 134038739
Entry
134038739         CDS       T10927                                 
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
  KO
K20100  YTH domain-containing protein 1
Organism
oep  Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:oep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oep03041]
    134038739 (ythdc1)
Spliceosome [BR:oep03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    134038739 (ythdc1)
SSDB
Motif
Pfam: YTH
Other DBs
NCBI-GeneID: 134038739
NCBI-ProteinID: XP_062340268
LinkDB
Position
18:complement(5239974..5249536)
AA seq 689 aa
MAVDRRDEKEGELNVLEDILTEAPDQDDELYNPESEHDVNEKKGSKRKNDRVDNQELKRL
RPSGHTTRQASKRPLPAAGASGKKSLSTRGRHPSEYKSEEYYEDRKTQPMRAGMSRGDPG
KVHNDKPMARRREPDRRIKPLMPDLSEKRRRTSEESVGRASPASKEEANSEEYVTDQETG
STAGSSDGNESNLDDEDVMEEEEGEKGPDDEEEEADEDEEEEGEEDDDEYELEEGDRRGG
NEPNDYDTRSEASDSRSESVTFSDGESVRSGSGSDASGSEKKHDKLSSSVRAVRKGKENQ
TSKLKYVLRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVR
ESGKFQGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLSNT
WNEHKPVKIGRDGQEIETECGMQLCVLFPQDESIDLYQVIHKMRHKRRMPSEPRSRGRPP
HREPARDLGRRRPEEFDIHNRKRPRIDYPPEFPQRPGFIQDPRNPPVDRRFPGVRRDVFL
NGSYNDYMREFHHNIGPPPPWQGMAPYPGMEQPPHHPYYQHHPPPPQAHPPYSGHHPVPH
DARFREKRVVRSFSSSLHDYDMRVDDFLRRTQAVVTGRRSRPRERDRQRERDRPRDVRRG
DRDRGRERDRERDRVRDREREKERGRYRR
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggccgttgacagacgagacgaaaaagaaggagagttaaatgtccttgaggacatactc
actgaagcccctgaccaagacgatgagctgtacaacccagaaagcgaacatgacgttaat
gagaagaaagggtcgaaaaggaagaatgaccgcgttgataaccaagagttgaaacgcctg
aggccctccggacacaccactaggcaggcctcgaaaagacctctcccagccgccggagcc
agtggcaaaaagtctctcagcacgagaggcagacaccccagtgaatacaaaagcgaggag
tattacgaagacaggaaaacgcagcccatgagagctggcatgtccagaggtgaccccggc
aaagtgcataacgacaagcccatggcccgcaggagagagcccgaccggaggatcaagccc
ctgatgccggatttgtcagagaagcgcaggagaaccagcgaggagagcgtcggcagggcg
agccccgcttccaaggaggaggccaactcggaggagtacgtcaccgaccaggagacgggc
agcacggccggctcctctgacggcaacgagtccaacctggacgacgaggacgtgatggag
gaggaggagggcgagaagggcccggacgacgaggaggaggaggcggacgaggacgaggag
gaggagggcgaggaggacgacgacgagtacgagctggaggaaggcgaccggcggggtggg
aacgagccgaacgattacgacacccggagcgaagccagcgactcccggtcggagtcggtc
accttctccgatggcgagtcggtccgctcgggctcggggtccgacgcctcaggttctgaa
aagaagcacgacaagctgtcctcctcagtccgagctgtgcgcaagggtaaggagaatcag
accagcaagctgaagtatgttctcagagatgcaagattcttcctgatcaagagcaacaac
cacgagaatgtctccctggcaaaagctaagggtgtttggtctacgctgcctgtgaacgag
aagaagctgaacgctgctttccgctcagccagaagtgtcatcctcgtgttctccgtgagg
gaaagtggaaagtttcaaggttttgcccggctgtcgtctgagtcgcaccacgggggttcc
cccatccactgggtcctgccggcaggaatgaatgccaagatgctcggcggcgtcttcaaa
attgactggatttgcagacgcgagttgccattcacaaaaacggctcacctctcgaacacg
tggaacgaacacaagcccgtgaagatcggccgggacggacaggagatcgagacggaatgc
gggatgcagctctgcgtgcttttccctcaggacgagagcattgacttgtatcaggttatt
cataaaatgcgtcacaagaggaggatgccgtccgagccgcgctctcgaggacggccgccg
caccgagagcccgcgcgcgacctgggaaggcgtcggccagaggaatttgacattcacaac
aggaaacggccacggattgactatccacctgagtttccccaaagaccaggttttatacag
gacccacgcaacccgcctgtggacaggcggttccctggggtccgaagagatgtctttctc
aacgggtcctacaacgactacatgagggaattccatcacaacatcggaccgccacctcct
tggcagggaatggccccataccccggaatggagcagcccccccatcatccatactaccag
caccacccacccccaccccaggcccacccgccctattctggccatcaccctgtcccgcac
gacgccaggttcagagaaaagagagtcgttcgctccttttcatccagcctgcatgactac
gatatgcgggtcgatgacttcctgcggcgcacgcaggcggtggtgactggccgccgcagc
cgtcctcgcgagcgggaccgacagagggagcgagaccggcccagggacgtgcgtcgaggc
gaccgagaccgtggacgcgaacgggaccgggagagagaccgggttagagaccgcgaacga
gagaaggagaggggccgctataggagatag

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