Osmerus eperlanus (European smelt): 134038739
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Entry
134038739 CDS
T10927
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134038739 (ythdc1)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134038739 (ythdc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
134038739
NCBI-ProteinID:
XP_062340268
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Position
18:complement(5239974..5249536)
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AA seq
689 aa
AA seq
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MAVDRRDEKEGELNVLEDILTEAPDQDDELYNPESEHDVNEKKGSKRKNDRVDNQELKRL
RPSGHTTRQASKRPLPAAGASGKKSLSTRGRHPSEYKSEEYYEDRKTQPMRAGMSRGDPG
KVHNDKPMARRREPDRRIKPLMPDLSEKRRRTSEESVGRASPASKEEANSEEYVTDQETG
STAGSSDGNESNLDDEDVMEEEEGEKGPDDEEEEADEDEEEEGEEDDDEYELEEGDRRGG
NEPNDYDTRSEASDSRSESVTFSDGESVRSGSGSDASGSEKKHDKLSSSVRAVRKGKENQ
TSKLKYVLRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVR
ESGKFQGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLSNT
WNEHKPVKIGRDGQEIETECGMQLCVLFPQDESIDLYQVIHKMRHKRRMPSEPRSRGRPP
HREPARDLGRRRPEEFDIHNRKRPRIDYPPEFPQRPGFIQDPRNPPVDRRFPGVRRDVFL
NGSYNDYMREFHHNIGPPPPWQGMAPYPGMEQPPHHPYYQHHPPPPQAHPPYSGHHPVPH
DARFREKRVVRSFSSSLHDYDMRVDDFLRRTQAVVTGRRSRPRERDRQRERDRPRDVRRG
DRDRGRERDRERDRVRDREREKERGRYRR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgacagacgagacgaaaaagaaggagagttaaatgtccttgaggacatactc
actgaagcccctgaccaagacgatgagctgtacaacccagaaagcgaacatgacgttaat
gagaagaaagggtcgaaaaggaagaatgaccgcgttgataaccaagagttgaaacgcctg
aggccctccggacacaccactaggcaggcctcgaaaagacctctcccagccgccggagcc
agtggcaaaaagtctctcagcacgagaggcagacaccccagtgaatacaaaagcgaggag
tattacgaagacaggaaaacgcagcccatgagagctggcatgtccagaggtgaccccggc
aaagtgcataacgacaagcccatggcccgcaggagagagcccgaccggaggatcaagccc
ctgatgccggatttgtcagagaagcgcaggagaaccagcgaggagagcgtcggcagggcg
agccccgcttccaaggaggaggccaactcggaggagtacgtcaccgaccaggagacgggc
agcacggccggctcctctgacggcaacgagtccaacctggacgacgaggacgtgatggag
gaggaggagggcgagaagggcccggacgacgaggaggaggaggcggacgaggacgaggag
gaggagggcgaggaggacgacgacgagtacgagctggaggaaggcgaccggcggggtggg
aacgagccgaacgattacgacacccggagcgaagccagcgactcccggtcggagtcggtc
accttctccgatggcgagtcggtccgctcgggctcggggtccgacgcctcaggttctgaa
aagaagcacgacaagctgtcctcctcagtccgagctgtgcgcaagggtaaggagaatcag
accagcaagctgaagtatgttctcagagatgcaagattcttcctgatcaagagcaacaac
cacgagaatgtctccctggcaaaagctaagggtgtttggtctacgctgcctgtgaacgag
aagaagctgaacgctgctttccgctcagccagaagtgtcatcctcgtgttctccgtgagg
gaaagtggaaagtttcaaggttttgcccggctgtcgtctgagtcgcaccacgggggttcc
cccatccactgggtcctgccggcaggaatgaatgccaagatgctcggcggcgtcttcaaa
attgactggatttgcagacgcgagttgccattcacaaaaacggctcacctctcgaacacg
tggaacgaacacaagcccgtgaagatcggccgggacggacaggagatcgagacggaatgc
gggatgcagctctgcgtgcttttccctcaggacgagagcattgacttgtatcaggttatt
cataaaatgcgtcacaagaggaggatgccgtccgagccgcgctctcgaggacggccgccg
caccgagagcccgcgcgcgacctgggaaggcgtcggccagaggaatttgacattcacaac
aggaaacggccacggattgactatccacctgagtttccccaaagaccaggttttatacag
gacccacgcaacccgcctgtggacaggcggttccctggggtccgaagagatgtctttctc
aacgggtcctacaacgactacatgagggaattccatcacaacatcggaccgccacctcct
tggcagggaatggccccataccccggaatggagcagcccccccatcatccatactaccag
caccacccacccccaccccaggcccacccgccctattctggccatcaccctgtcccgcac
gacgccaggttcagagaaaagagagtcgttcgctccttttcatccagcctgcatgactac
gatatgcgggtcgatgacttcctgcggcgcacgcaggcggtggtgactggccgccgcagc
cgtcctcgcgagcgggaccgacagagggagcgagaccggcccagggacgtgcgtcgaggc
gaccgagaccgtggacgcgaacgggaccgggagagagaccgggttagagaccgcgaacga
gagaaggagaggggccgctataggagatag
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