Osmerus eperlanus (European smelt): 134038896
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Entry
134038896 CDS
T10927
Symbol
smarcb1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1b isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03082
ATP-dependent chromatin remodeling
oep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134038896 (smarcb1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134038896 (smarcb1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134038896 (smarcb1b)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oep03021
]
134038896 (smarcb1b)
03036 Chromosome and associated proteins [BR:
oep03036
]
134038896 (smarcb1b)
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134038896 (smarcb1b)
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134038896 (smarcb1b)
SWI/SNF complex
134038896 (smarcb1b)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134038896 (smarcb1b)
PBAF complex
134038896 (smarcb1b)
SWI/SNF complex
134038896 (smarcb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
134038896
NCBI-ProteinID:
XP_062340532
LinkDB
All DBs
Position
18:complement(185001..191873)
Genome browser
AA seq
370 aa
AA seq
DB search
MALSKTFGQKPIKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKI
VASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPNSS
HHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLDMEIDGQK
LRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESHPTDTLLEEQAD
QRVIIKLNIHVGNISLVDQFEWDMSERENSPETFALKLCSELGLGGEFVTTIAYSIRGQL
SWHQRTYAFRSDFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRM
RRLANTAPAW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcactaagcaaaacctttgggcagaaaccgataaaatttcaattagaacaagatgga
gacttttacatggttggatcagaggttggcaactacctgcgcatgttcaggggctctctt
tataaaagatacccatcgctatggagacgcttagcctcggtggaggaaagaaagaaaatt
gttgcgtcgtcacacgccaccagtgtgactctgctgaaggcgtcagaatgcgaggagatc
tttgagggcaatgacgagaagtacaaagcggtgtcgatcagcacagagccacctgcctac
ctcagggagcagaaggccaagaggagtagccagtgggttcccacgctgcccaacagctcc
catcacctggacgccgtgccctgctccaccaccatcaaccgcaaccgcatgggccgcgac
aagaagaggaccttccctctctgttttgacgaccacgacccggctgtgatccacgagaac
gcgtcgcaggccgaggtgctggtccccatccggctggacatggagatcgacggccagaag
ctgcgagacgccttcacctggaacatgaacgagaagttgatgaccccggagatgtttgca
gagatactgtgtgacgacctggatctgaaccctctgaccttcgtgccagccatcgcctcg
gccatccggcagcagatcgagtcccaccccaccgacaccctgctggaggaacaggccgac
cagagggtcatcatcaagctgaacatccatgtggggaacatctctctggtggaccagttt
gagtgggacatgtctgagagggagaactccccagagaccttcgccctgaagctgtgctct
gagctgggcctgggaggggagttcgtcaccaccattgcctacagcatccggggccagctc
agctggcaccagcgcacctacgccttcaggtctgacttcagtgagaaccccctgcccaca
gtggagattgccatcaggaacacgggcgacgccgaccagtggtgccccctgctggagacc
ctgacagacgcagagatggagaagaagatccgggaccaggacaggaacaccaggcgcatg
agacgcctggccaacaccgcccccgcctggtga
DBGET
integrated database retrieval system
