Osmerus eperlanus (European smelt): 134038957
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Entry
134038957 CDS
T10927
Symbol
sema4d
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oep04090
]
134038957 (sema4d)
CD molecules [BR:
oep04090
]
Proteins
134038957 (sema4d)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
ig
Ig_3
Ig_2
I-set
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
134038957
NCBI-ProteinID:
XP_062340652
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Position
18:complement(9753108..9885235)
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AA seq
906 aa
AA seq
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MTDKGNVTVSKYPESNMAFGVLGVFLGLLLEVSTHSPSSAPRTSWKHEEVNLIEFSEPGV
FNYSTLLMSEEKEVLYVGAREAIFELSIRNVSIRNNKVQWTVPQTPMMMCTAKGKSKETD
CLNYIRVLQVLDDDHLYVCGTHAFQPLCDYLSLKDFSLEGRAEDGRGKCSFDPSQSFTTV
MVDGELYSGTAYNFLGSEPIISRYSLSQSLLRTEYSTSWLNEPSFVFADVIREGKNSADG
EDDKIYYFFTEVSVEYEFYGKLLIPRVARVCKGDLGGQRTLQKKWTSFLKAKLVCSMPEL
NFVFNVVHDVFILKTPDWRQTVIYGVFTSQWANVGLSAVCAYNMTSVEEVFSKGKYMQKA
TVEQSHTKWVRYNGITPMPRPGACINNQNRLRNITSSLHLPDKTLQFVKDHPLLEDPVLP
IGNGPQLITKDVNYTQIVVERVRALNNNVYDIIFTGTDKGVLHKSVVYEGEVHTVEEIQL
LQNSEPIQNLLLSSHGTRSIYAGSNSGIVQSPTAFCEKYTSCEDCILARDPYCAWNPDTA
VCINIFHTSTKTHRNLIQSLNGDADKCPSSLSLSVDEYQSVTVKLWSSVELPCTVRSNLA
QTLWMVNGSALTEGSRGFHLLGDMGLLIHSVAPEDQGFYECWSLETAAGKNFTRLLAGYM
LSLGKAPSQSSHSTVPLSSRLSTLNHTEGNRHGNTVPLTSAPPGFTGFNSPSLSASSLTL
PPGTINSSSTTKFLPKHLTPSSSTPRLETPGDPATEYLQRDNSTALLFLFLLFFLLFLAA
LAYNCYMQYLPETCLRLRAAMLGSTKKPQPEYVACEAGHGLMEQGAGEKLDLTKQQHHPH
PTQNGKQNQNQLRALRDTGYETEPEYGNGRVPSHSYADESPGKEKPFDVDCVSQPIEYAD
ADEPFC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaaggaaacgttacggtttcaaagtatccggaatcgaacatggcattcggt
gtccttggtgtgttcctgggcctgctgctggaggtctccacccacagtccttcaagtgcc
ccaaggacctcctggaaacatgaagaggtcaatttgatagagttctctgagcctggagtt
ttcaactattccaccctactaatgagcgaagaaaaagaagttctctacgttggggccagg
gaggccatctttgagctgagcataagaaacgtgtccatcagaaacaacaaggttcaatgg
acagttccacaaaccccaatgatgatgtgcacggcaaaaggaaaatctaaagagactgac
tgtctgaactacataagagtgctccaggtgttggatgacgaccatctgtatgtctgtgga
acgcacgcttttcaaccactgtgtgactacttgtctctcaaagacttctctctggagggg
cgagcagaggacggacgagggaagtgttcttttgacccctctcagagctttactaccgtc
atggtcgatggagaactgtattctgggacagcttataacttcttgggaagtgaacccatt
atttctcgatattccttgtcacagagtctgttgagaaccgaatattccacatcgtggtta
aatgagcctagttttgtctttgccgatgtcatccgggagggaaagaacagcgcagatggt
gaggatgataagatatactacttcttcacagaggtgtcggtggagtacgagttctatgga
aagctgctgatccctagagtagctcgtgtctgcaagggggatcttggaggccagaggact
ttgcagaagaagtggacctccttcctgaaggccaagctggtgtgctctatgcccgaactc
aactttgtcttcaatgtggtccacgacgtgttcatcctcaagactcccgactggaggcag
acagtcatctacggggtctttacctcccagtgggcgaacgtaggtctatcggcagtgtgt
gcctacaacatgacctcggtggaggaggtcttctccaaggggaagtacatgcagaaggcc
actgtggagcagtcccacaccaagtgggtgaggtacaatggtatcacgccaatgccacgc
cccggagcgtgcatcaacaaccagaaccgcctccggaacatcaccagctcgctccacctg
cccgacaagaccctgcagtttgtcaaagaccaccccctgctggaggaccctgtgcttccc
attggcaatgggcctcagctcatcaccaaggatgtgaactacacccagattgtagttgag
agggtgcgggcactgaacaacaacgtctatgacataatcttcactggaactgataaagga
gtactgcacaagtctgtagtatatgaaggagaggtccacactgtggaggagatccaactg
cttcagaattctgaacccattcagaacctgctgctatcatcacatgggactaggtctatc
tacgccggctccaactcgggcatagttcagtctccaacagccttctgtgagaaatacaca
tcctgcgaagactgtatcttggccagagacccgtactgtgcctggaacccagacactgca
gtctgcatcaacatcttccacacctcaaccaaaacacaccggaacttaatccagagtctc
aatggagatgcagacaagtgtccttcatctctatctctctctgtggacgagtaccagtct
gtgactgtgaagctatggagctcagtggagctgccctgcacagtgcgctctaaccttgcc
cagaccttgtggatggtgaacggcagtgccctcaccgagggctcaaggggtttccacctg
ctgggggacatgggtctgcttatccacagcgtggcccccgaggaccaggggttttacgag
tgctggtccctggagacagcggctggaaagaacttcacccgcttactggccggttacatg
ctgagtctggggaaggccccttcccagtccagtcactccacggtccctctcagctccagg
ctctctaccctgaaccacactgaaggtaatcgtcacggtaacactgtcccactaacatca
gcccctcctggctttaccggcttcaactcaccctcactcagcgcttcatcactaactctg
ccccctggcacgatcaacagcagcagcacaaccaagttcctgccaaagcatctcaccccc
agctccagcacaccccgcctagagacgcccggcgaccctgccacagagtacctgcagcgt
gacaacagcaccgccctcctcttcctctttctgcttttcttcctgctcttcctggcggcg
ctggcctacaactgctacatgcagtacctgccggagacgtgcctgcgactccgcgccgcc
atgctggggagcaccaaaaagccccagccagagtatgtggcctgcgaggccggccatggg
ctcatggagcagggcgcaggagagaagctggacctgaccaagcagcagcaccacccccat
cctacccagaacgggaagcagaaccaaaatcagctgagagctctgagggacaccggatat
gagacagaacccgagtatggtaatggcagggtcccttcccacagctatgctgacgagagt
ccggggaaggaaaagccctttgacgtggactgtgtgtcccaaccaatagaatatgctgat
gcagacgagcccttctgctag
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