Osmerus eperlanus (European smelt): 134039052
Help
Entry
134039052 CDS
T10927
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor VAV2-like
KO
K05730
guanine nucleotide exchange factor VAV
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134039052
09142 Cell motility
04810 Regulation of actin cytoskeleton
134039052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
DUF7145
Nup88
SH2_2
C1_2
PH_10
Motif
Other DBs
NCBI-GeneID:
134039052
NCBI-ProteinID:
XP_062340787
LinkDB
All DBs
Position
18:1331972..1367611
Genome browser
AA seq
759 aa
AA seq
DB search
MLLQSPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVEVR
QPMIRYMQKMGMTEEDKRNCCLVEIHETEAKYYKTLEDVDKNYMIPLKQVLSQQDMEAIF
VNLEDIIRVHLALLKAVDLNMLSGGSGLAKIFLDFKERLLIYGLYCSHMENAQKTLDELI
ATREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKVPVESSADRPERQQLKE
ALEAMQDLAMYINEVKRDNETLKKISEFQSSIENLQQVRLEEYGRPKIDGELKVSSIVNR
NXQDRYIFLFDKVVIVCKRKGYSYELKEIIELEPYKMSDDPMNNRDLKKSSGKMWSYGFY
LIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPERATANQHNFQMHTFEKNTNCRAC
KMLLRGIFYQGYFCSRCGTGAHKECLEVITICKINPLDLEPELSTGPKMVAVRNYHGTPA
PPGKPPLSLQTGDFIELLKGDPDTSWWEGKIMQTQKSGFFPSSCVKPFLDPKPIQSFPAR
QSSRETEYYGYPWFAGNMERQQADNLLKSHSSGTYLIRERTAEAERFAISIKFNEEVKHI
KVIEKDSWIHITEAKKFESLLELVEYYQAHSLKESFKLLDTTLRHPYKARERSLTRASSR
SPAATCASYNFSFLSPQGLNFSSSQSSAPFWSVFTPRVVSTAVARYSFAARDMRELSLRE
GDVVKIYSKIGGDQGWWKGEANGRIGWFPSTYVDEEGVQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcttctacaatcgcccttcccttcagaggacactgctctgaacgaggatgatgtgtac
cgaagccttgaggagctggctgatgagcatgatgtcggggaggacgacatctacgactgt
gttccctgcgaggacgatggtgatgacatctatgaggacatcatcaaggtggaagtacga
cagcccatgatcagatacatgcagaagatgggcatgacggaggaggacaagaggaactgc
tgcctggtggagatccacgagaccgaggccaagtactacaagactctggaagatgtagac
aagaactacatgattcccctgaagcaggttctcagccagcaagacatggaggccatcttt
gttaacctggaggacatcattagggtccacttggcactgcttaaggcagtcgacctcaac
atgctgagtgggggtagcggcctggccaagatcttcctggacttcaaggaaaggctgctg
atctacgggctgtactgcagccacatggagaacgcccagaagaccctggacgagctcatc
gccacgcgagaggacgtcaagatgaaggtggaggagtgtaccatgaaggtgcaggagggg
aagttcaagttgcaggatctgctggtggtccccatgcagagggtcctcaagtaccatctc
ttactgaaggtacctgttgagtcatctgcggatcgtccagaacgacaacaactaaaggag
gctttggaggccatgcaggacctggccatgtacatcaacgaggtgaagcgagacaacgag
accttgaagaagatcagcgagttccagagctccatcgagaaccttcagcaggtgaggctg
gaagagtatggcagaccaaagatagatggagagctgaaggtttcctccatcgtcaacaga
aactaacaggaccggtacatcttcctgtttgacaaagtggtcatcgtgtgcaagcgtaaa
ggctacagttacgagctcaaggagatcatcgagctggagccgtacaagatgtccgacgac
cccatgaacaacagagacctgaagaagtcaagtggaaaaatgtggtcctatgggttctac
ttgatccacctgcaggggaaacagggcttccagttcttctgcaagaccgaggacaccaag
aggaagtggatggagcagtttgagatggccatgtccaacatcaagccggagagggcaacg
gccaatcagcacaacttccagatgcacacgtttgagaagaacaccaactgtcgggcctgc
aagatgctgctgaggggtatcttctaccaaggttacttctgttctcgctgtggcacaggg
gcacacaaggaatgtctggaagtcatcaccatctgtaaaatcaatcccctggatttggaa
ccggagctatcgacaggtcctaagatggtggcggtgcgtaactatcacgggacacccgcc
cccccggggaagccccccctctccctccagacgggggacttcatcgagctgctaaagggc
gaccctgacacctcctggtgggagggtaagatcatgcagacccagaagagtggcttcttc
cccagctcctgtgtgaagccattcctggaccccaagcccatccagtccttccccgcccgc
cagtcgtcaagggaaacggagtactacggctacccctggtttgccgggaacatggagcga
cagcaggcggacaacctgctcaagtcccacagcagcggcacctacctgatcagggagagg
acggcggaggccgagagattcgccatcagcatcaagttcaacgaggaggtcaagcacatc
aaggtgatcgagaaggacagctggatacacatcacagaggccaagaagtttgagagcctg
ctggagttagtagagtactaccaggcccactccctgaaggagagcttcaagctgctggac
accacgctccgtcacccctacaaggccagggagcgctccctcacccgggccagctcacgc
tcgccagcagccacctgtgcttcctacaacttctccttcctcagtcctcaaggtctcaac
ttctcctcctctcagagctctgctcccttctggtcagtgtttacccccagagtggtgagc
acggcagtggctcgctacagcttcgcggcgcgggacatgagagagctgtcgctccgagaa
ggagacgtcgtgaagatctacagcaagatcggaggagaccagggctggtggaaaggagag
gccaacggaaggatcgggtggtttccatccacctacgtcgacgaggaaggagtccagtga
DBGET
integrated database retrieval system
