Osmerus eperlanus (European smelt): 134039211
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Entry
134039211 CDS
T10927
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134039211
Transcription factors [BR:
oep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134039211
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134039211
NCBI-ProteinID:
XP_062340908
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Position
19:11561748..11564120
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AA seq
292 aa
AA seq
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MYNMLEHQMKSSVQTHQPGPGMIPGNGPGVGGAHTGSKTTACQPGSDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGADWKQLTDAEKRPFIDEAKRLRAQHMKEYPDYK
YKPRRKTKPMLKKDNLVNNYMSPGMLSAPTAQGPGSNQRMDSYGWGPAGGYTGMQNEALS
YTQQLHRYDLSALPYPSGMASAQAYMNGANSYSPMSYSSSPQQPSPVMKPDSMAHSPTGS
HPHAHQRGLQGDLRDMISMYMPPGESTDPNGQRGYSNIPQHYLGGSVPLTHI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgctggagcaccaaatgaaatcgtccgtccagacgcaccagccaggacct
gggatgatccctggcaacgggccaggtgtgggcggtgcacacacaggtagcaagaccaca
gcctgccagcctggctccgaccccatggacaaggtcaaacggcccatgaacgccttcatg
gtctggtctcgaggccagcggagaaaaatggctcaggagaatcccaaaatgcacaactct
gagatcagcaagcgcctgggcgccgactggaagcagctgacggacgcggagaagagaccc
ttcatcgacgaggccaagaggctgcgagcccagcacatgaaggagtaccccgactacaag
tacaagccccgccgcaagaccaagcccatgctgaagaaggacaacctggtcaacaactac
atgagtcctggcatgctgagcgcccccacagctcaggggcccgggtccaaccaacggatg
gacagctacggctggggcccggcgggggggtacaccgggatgcaaaacgaagcgctcagc
tacacccagcagctgcaccgctacgacctgtcagcactgccgtacccctcgggcatggcc
tcagctcaggcctacatgaacggagccaactcatacagccccatgtcctacagcagcagt
ccccagcagcccagcccggtgatgaagccagacagcatggcccactcccctacaggcagc
catccccacgcccaccagaggggcctgcagggggacctgagggacatgatcagcatgtac
atgccacccggagagtccacagaccctaacggtcagagaggctactcaaacatcccccag
cattacctcggaggctcggtacctctaactcacatctga
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