Osmerus eperlanus (European smelt): 134039280
Help
Entry
134039280 CDS
T10927
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134039280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134039280
03036 Chromosome and associated proteins [BR:
oep03036
]
134039280
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
134039280
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
134039280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
ATRX_C
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134039280
NCBI-ProteinID:
XP_062341016
LinkDB
All DBs
Position
19:complement(13716094..13732084)
Genome browser
AA seq
1948 aa
AA seq
DB search
MSGEVLSTSKLNVLITKLHEYLSYSSVDDNDDSLGARGPDGIKNKGNGLPHSSDNTEVGT
SAETPKVSAALGSRRKPSVVTKHSGLDESGDSNDTNEDWDLDFNSNGRLDVTRLPKGTVV
VRPEPVDQGRDDFRGPEFRSRRSGTLKRDLPRRRGGGEHLEIVSCTACGQQVNHFQRDSF
YQHPVLKVLICKSCFKYYSSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILR
NLGRKELSGILDEESKWYCYVCSPEPLLDLVVACDSVLDNLERLCHQNRKRSRGENDKSG
LSNTIPRDSQNLHLGGCSHSIMEGHEEFSSSLPIPDDLTEKVKFLVHSTNSLNATFVKLV
QSGKDKQTTNDRRMYLRSFESVLKDLRTSHDALEDALKEASELEMLNSEDEAGCPDSDAT
QPAGLELNIADENCLNEPKQMATEQVLEDDSDSKGPTANGESLFSDTKGGLESSEGGGET
MQRRTRGRPRKTPAEPSESSANVTKELVVKLTPVPAVDETPASELETDAVVKTEEQDEDT
EEQMEEEKDEAPDVAECKDEPPAEVRECLVVEEEHDNRRSPRVKTTPLRRPGDQIKPSLP
GAACESDTDPDDPAADAAHGVEDREVGKITEDSDSDEVPAALLQLGAVKHGSDEADSDEE
IEGSTRVRKKCLFGLTKNKPLSPERMVRKRKTQDRCSDSDESENRTKVQRARGSDSSSDD
PDLQKEIKALSQLTPRGAPRRAQTEGASVDGKPSRQGPGPKKASDTPRAQTKTEPTSTTS
DEEGDLDSDSGDDVDVQKIKTITEDVCLLGPSSFHQSSGEDDQACSGPSGAADDDDDDDP
ENRIAKKMLLAQIKANYSSGEEFSSDEESTQDEESEEGKSRGQRGGRTDDSVDEEGETSL
SSSSEESKTGRRHRLLRHKLSLDEGTLDDPKPTEKGNEQVRRKERSKDSQSGEDDSQSEQ
EKSGMSEELSQSEDNENEDKPKNSKSSSKMEKEVLRSYLQKKQQQPSCIVLSDSSTDMEG
DGEGDSKETSKGRKKIRKIIDDDHLRSETLRALKEEEERCKRLAEREQNREDLREVIVID
DESQVACPITTKLVLDQDETTKEPLIQVHRNLVTRLKPHQVDGVQFIWDCCCESVKKANT
TPGSGCLLAHCMGLGKTLQVVTFLHTMLQSKILMFRTALVVCPLNTILNWVNEFDKWQDN
MGDDKVKVTELATLKRPQERYIALQKWQRDGGVMILGYEMYRNLTLGHKVNNQQLKKTFH
CTLVNPGPDFVICDEGHILRNEASNISKAMSAIKTKRRVVLTGTPLQNNLNEYHCMVNFI
KENLLGSLKEFRNRFINPIQNGQCADSTPRDVRIMKNRAHVLHAMLAGCVQRRDYSALTK
FLPPKVEYVLAVRVTTLQIRLYRYYLDNFTRAGSLVDGARVKAGTSLFKDFQILSRIWTH
PWCLQLNYISKENKGHFEGKNQIRAAHLLGSDEPAVSDSKEKEEKGSLPPPGDDEDDDVI
IVWDSVLKGAHVEKDKPANPAVEAVKAGSSTRADSPAVDWFKVLLSDTDSSVLEHSGKMV
LLFEILRMAEELGDKVLVFSQSLISLDLVEDFLDLANKARNKGETSPYKGPGSWIRNTDY
YRLDGSTSATSRKKWAEDFNDSINTRGRLFLISTRAGSLGINLVAANRVIIFDASWNPAY
DIQSIFRVYRFGQQKNVFVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTLFE
LTELYMFEPDLLEEPNSEKKNKKTTHLLPKDLILADLLQGCREHIVRYHEHESLLDHKEE
EELSEADRKAAWDEYEAEGAIFLNKQSSNAVVPSPSNLPGQFSQNMLSKKTNEQLKKMIH
DSRTKVTEAIKALRGVENRPLEYYKIILWKDNPMLTEADVSTMAERWKSSNDTEHQRRMT
TYEELLSKQHSLTFCIQRILSSRKNNDA
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagaggtgctaagtacaagcaaactcaatgtgttgatcaccaaactccacgag
tatttgtcttattcatcagtggatgataacgatgattcactgggggctcgaggtcctgat
ggtataaaaaataagggcaatgggctgccccactcatcagataatactgaggtgggtact
tcagcagagactcctaaggtttctgcagcactcggttcacggaggaaaccctcagttgtc
accaaacattctggcctggatgaatctggtgactcaaacgacactaatgaagactgggat
ttggacttcaattcaaatggtcgtctcgatgtaaccagattgccaaaaggcactgttgtg
gtgaggcctgaaccagtggaccagggcagagacgacttcagaggtcctgaatttcgaagc
cgcagatctggaacactgaaaagagatttaccccggagacgaggtggaggtgaacactta
gaaatagtgagttgcactgcatgcggacagcaagtgaaccacttccagagggactccttt
tatcagcaccctgtacttaaagtacttatttgcaagtcatgtttcaaatactactcaagc
gatgacatcagcaaggatggagatggtatggatgagcagtgcaggtggtgtgcggagggt
ggaaacttgatctgttgtgatttctgcagcaatgctttctgtaagaagtgtattttaagg
aacttggggcgtaaagagttgtctgggattctggatgaggagagtaaatggtactgttat
gtatgcagtccagaacccctgttagacctggtggtcgcctgcgacagtgtccttgacaac
ttagaacgtctttgtcatcaaaatcgtaagaggagcagaggagaaaatgataaatctgga
ctcagtaacacaataccaagggactctcaaaacctgcacttgggtgggtgcagtcatagt
atcatggaaggtcatgaggagttcagcagctctctaccaatcccagatgatctcactgaa
aaggtcaaattcctagtccactccacaaattccttaaacgcaacatttgtcaagctcgtc
caaagcggcaaagacaaacagacaaccaacgaccgtcgaatgtacctgaggtcttttgag
tccgtgcttaaagatctgaggacgtcccacgacgccctcgaggacgccctgaaggaggcc
agcgagctcgaaatgctgaacagtgaagatgaagctgggtgtccagattcagacgccact
caaccggccgggttggagctgaatatcgcagacgaaaattgcttaaatgaacctaagcaa
atggccaccgagcaagtgctggaggacgactcggactccaaaggcccgacagctaacgga
gagtcgttgttctctgatacgaaaggtggccttgagtcttccgaggggggaggggagacg
atgcagcgacggacccgaggcaggcctcgcaaaacccccgcagagccttcagaaagttcg
gccaacgtgacgaaagagttagtggtgaagctcacgcccgtgcctgccgtggacgagacg
ccagcgagcgagctggagaccgacgctgtcgtgaagacggaggagcaggacgaagatacg
gaagaacaaatggaagaggagaaggacgaagcccctgacgtggcagaatgcaaggacgaa
ccccccgctgaggtgagagaatgtttagttgtggaagaagagcacgacaacagacgttcc
ccgcgggtgaagaccacccccctgcgccgcccgggcgaccaaatcaagccctcccttccg
ggcgcagcctgcgagagcgacactgaccccgacgaccccgctgccgatgccgctcacggt
gttgaggaccgagaggtcggcaaaatcacggaagactccgactcggacgaggttcccgct
gctctcctgcagttgggagccgtgaaacacggctctgacgaagccgacagcgacgaggaa
atcgagggctccactcgcgtgaggaagaaatgcctctttggactgaccaagaacaagccg
ctctccccggaaaggatggtccgcaaacgcaaaacccaagaccgctgctccgactcggac
gagagtgagaacaggacgaaggtccagagagccagaggcagcgactcctccagtgatgac
cccgacctgcagaaggagatcaaggctctgagccagctgacgcccagaggggcgcctcgc
agggcccagacagagggagccagtgtggacggtaagccgagcagacaagggccggggccc
aaaaaggcatcagacactcccagggcccagacgaaaacagagccgacctcaaccacgagc
gacgaggaaggtgacctggactctgactccggggatgatgtcgacgtccagaagatcaag
accatcacagaggatgtgtgtttattagggccctcgagcttccaccagtcctccggagag
gatgatcaggcttgctctgggccatctggggcggcggatgatgatgatgatgatgaccca
gaaaatagaattgccaagaaaatgctcttggcccagatcaaagccaactactcctctggg
gaagaattctcttccgatgaagagtcgacgcaagacgaggagtcagaggaagggaagagc
agggggcagagaggagggaggactgacgacagtgtggacgaggaaggagagacctctctg
agttccagctctgaggagagtaagactgggcggagacaccgcctgctccgacacaagctc
tctctcgacgagggaaccctagatgatcccaaaccgacggagaaggggaatgagcaggtc
aggagaaaagagcgaagcaaagattcgcaaagtggtgaagatgacagccaatcggagcaa
gagaaatctggcatgagtgaggagctgagccaatcagaagacaatgaaaatgaagataag
cccaaaaactccaaatcatcgtccaaaatggagaaagaagtcctccgcagttatctgcag
aagaagcaacagcagccgtcgtgtatcgtgctgtctgactcgagcacggacatggaaggc
gacggggaaggcgactccaaagagacgtcgaaaggccgcaaaaagatccgtaaaatcatc
gacgacgatcacctgcgctcggagacgctgagagctctcaaggaagaggaggagagatgc
aaacgccttgccgaaagagagcagaacagggaggacctgagagaggtcatcgtgatagac
gacgagtcgcaggtggcctgtcccatcaccaccaagctggtgctggaccaggatgaaacc
accaaggagcctctcatccaggtgcaccggaacctggtgaccaggctgaagccccaccag
gtcgacggtgttcagttcatatgggactgctgttgtgagtcggtgaagaaggctaacacc
acccctggatctgggtgtctactagcccactgcatgggcctgggaaagactctgcaggtt
gtaaccttccttcacacgatgctgcagtcgaagatcttgatgttcaggaccgctctggtg
gtgtgtcccctcaacactatcctcaactgggtcaacgagttcgacaaatggcaagacaac
atgggagatgataaagtcaaggtgacggagttagccactctgaagcgaccccaggaacgg
tacatcgccctgcagaagtggcagagagatggaggcgtcatgatcctggggtacgagatg
taccgtaacctcacgctgggccacaaagtcaacaaccaacagctcaagaagaccttccat
tgcacacttgtcaacccaggtccagactttgtgatctgcgacgagggccacatcttgagg
aatgaggcgtcaaacatctccaaagcgatgagtgccatcaagaccaagcggagagtggtg
ctgactggcaccccgctccagaacaacctcaacgagtaccactgcatggtcaacttcatc
aaggagaaccttctgggttcgctgaaggagttcaggaaccgcttcatcaatcccatacag
aacggccagtgtgccgactccacccctagagacgttcgcatcatgaagaaccgcgcccac
gtcctgcatgcgatgctggcgggatgtgtacagaggagagattactctgccttgaccaag
ttcctccctcccaaagtggagtatgttctggccgtgagggtgacaactctacagatcagg
ctgtatcgatactacctggacaacttcacacgtgcagggtcgttggtggatggggcgagg
gtaaaggccgggaccagcctcttcaaggacttccagattctcagccgcatctggacacat
ccctggtgtctgcagctcaactacattagcaaagaaaacaagggccattttgaaggaaag
aaccaaattagagctgctcatctcctgggatcggacgaaccagctgtgtccgacagcaaa
gagaaagaggaaaaggggagcctgccaccgcctggggacgatgaggatgacgacgtgatc
atcgtgtgggacagcgtgttgaagggggcccacgttgagaaggacaaaccagcaaatcca
gcagtagaagcagtgaaagcaggcagcagcacccgggcggacagtcctgcggtcgactgg
ttcaaggtcctgctgtcggacactgactccagcgtcctggagcactctggcaagatggtg
ctgctgtttgagatcctcaggatggccgaggaactgggggacaaagtgctggtgttcagt
caatccttgatctcgttagatttggtggaagatttcttggacctcgccaacaaagccaga
aacaagggagaaacctccccgtacaaaggacctggaagctggatcagaaacacagattac
taccgtctagatgggtccaccagcgccacatctaggaagaaatgggccgaagattttaat
gactcaatcaacacacggggccgcctgtttctgatctcaacgagagctggatccctgggt
atcaacctagtggctgcaaacagagtcatcatctttgacgcttcctggaaccctgcctac
gacattcagagcatcttcagggtgtaccgcttcggtcagcagaagaacgtgttcgtttac
cgcttcctggctcagggcaccatggaggagaagatttacgacaggcaggtggccaagcag
tccctgtcgttcagggtggtggaccagcagcagatcgagagacacttcaccctgtttgag
ctgaccgaactttacatgtttgagcccgacctgctggaggagcccaactcagagaagaag
aacaagaagaccactcacctgctccccaaggacttgattctggcggatctgcttcagggc
tgcagagaacacattgtgcgttaccacgaacacgagtcgctgctcgaccataaggaggag
gaggagctaagcgaggctgaccgcaaagcagcctgggacgaatatgaggctgagggggcc
atcttcttgaacaagcagtcgagcaacgcagttgttccaagcccctccaacctgccagga
cagttcagccagaacatgctgagcaagaaaacaaacgagcagcttaagaagatgattcat
gacagtcgtacaaaggtcactgaggccatcaaggcactgcgaggtgtagagaaccgcccc
ctggaatactacaagataatcttgtggaaggataaccccatgctgacagaggcagatgtc
agcaccatggcagagagatggaagagcagcaatgacacagagcatcaacgcaggatgacc
acatacgaagagcttctctcaaaacagcactctctgactttctgcatccagaggattttg
agcagccgaaaaaataacgatgcataa
DBGET
integrated database retrieval system
