Osmerus eperlanus (European smelt): 134039313
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Entry
134039313 CDS
T10927
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134039313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134039313
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134039313
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134039313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
134039313
NCBI-ProteinID:
XP_062341094
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All DBs
Position
19:10322136..10386874
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AA seq
827 aa
AA seq
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MTLPQRRLAGVWPWLLMAALQVVFGQTGLELAAAVESERSAPRAVIKVTLLKHEHTGTPI
TLEGLFVGGSAGYAEGKLMQSHPLSLCNASEDERQESDFITIVKLEHKVPRCQSLISKAH
LALERGAQAIIFDVSDDANAALELHSQSYEDYLPHPVVLVEAENAEKLMGLVNKNEEARV
QIDIIREVPKWPHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAIGRLE
TRTYSSGCSGSQRHRGGWGSASSNSSPVCAICLEEFLDGQDLRIISCRHEFHKECVDPWL
LQHRTCPLCMHNIMGTDLASRQSQRSRIQQTPEHSQNFLHPHSYGGPHSHAYSPHAIPFS
MRPHYPRGPSGPYPSLGHYTGSPPSEHQTLRFLPSRPLGSGCGYHLPAEVPGRPHRVGGG
CRPGGHYVARRPCHGYRSACPAQRSASSSRLHQPPSSAPQARAAGAPHNRQDEGSCSGGS
YHTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFV
YYGPGPGPVRTPRRNSLEAGARPRSLDSVVNRGGCPEEQQQQTVFSHVHYHRHRHHHYEE
GEHGQGPGRGSDEEQGATAACPAPAPDKDSPLCPLKHSPCHCPIVDPIDRPIPVTEDQDH
EPSPPSGPPVLLPPGPLQPPPPPCCHQAHGPPNRRSGRLGGCVMDGPSVRFHQSLDLQDD
CSIHIHYGQGPGYCCPPPPEMPPALLPVPLILDSGAIEDWPCCGGAHVVWQKRVQPAHSE
PQLPGPGAHMDRPRCRLHHSPTTERSMDVCLYCQTLHHQGSEEESGV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgacccttccccagcggcgactggccggtgtctggccgtggctgcttatggcggccctg
caggtggtgttcggccagactggcctggagctggctgcggctgtggagtctgaacggtcg
gcccctagagctgtcatcaaggtgacactgctcaagcatgagcacaccgggacgcccatt
accctggaggggctgtttgttggaggaagtgccggttatgcggaggggaaactgatgcag
tcgcaccctctgtccctgtgcaacgccagcgaggacgagcgccaggagagcgacttcatc
accatcgtcaagctggagcacaaggttccccggtgtcagtctctgatcagcaaggctcac
ctggcgctggagagaggggctcaggccatcatcttcgacgtctcggacgacgccaacgct
gctctcgagttgcattcacagtcatatgaagactaccttccccacccggtggtgctggtc
gaggctgagaatgcagagaagctgatgggtctggtcaacaagaacgaggaggccagggtc
cagattgatatcataagggaggtccccaaatggccccattacgatgttgggatcctcctc
actattgttctggccatcctgaccatcgtcctgatctttgcctttcgctacaaatgcaag
tccaaccgaacctgggactcagtccaccagcagaccatgcgggccatcggtcgcctggag
acccggacgtacagctcgggctgctcgggctcccagcgccaccgcgggggctggggctcc
gccagctccaactccagccccgtgtgcgccatctgtctggaggagttcctggacggacag
gacctgaggatcatctcctgtcgtcacgagttccataaggagtgtgtggacccctggctg
ctgcagcatcgcacctgccccctctgcatgcacaacatcatgggcacagatctagcgtca
cgccagtcccagaggagccgaatccagcagaccccagagcacagccaaaacttcctgcac
ccccactcctacggaggtccccacagccacgcctactccccgcacgccatccccttctcc
atgaggccccactacccccgcggcccctcggggccctacccctccctgggacactacacc
ggctccccgccttcggaacaccagaccctgcgcttcctccccagccgcccgctgggttcc
ggctgcggttaccacctccctgcggaggtccctgggagaccccacagggtggggggcggc
tgcaggccgggggggcactacgtggcgcgccgcccttgccacggctaccgctcggcctgc
cccgctcagcgcagcgcctccagctcccggctgcatcagccgccctcctccgccccccag
gcccgcgccgcgggggccccgcacaacaggcaggacgagggcagctgctcgggggggagc
taccacacggagcgtagcggctatctggccgacgggccagccagtgactccagctccggg
ccctgccacggctcctccagcgactcggtgctcaactgtaccgacgtttccctgcagggc
gtctacggcagctggtccaccttccgcagctctctgagcagtgactatgacccgtttgtg
tactacgggcccgggcccggtcctgtcagaacgccacgcaggaacagtctggaggccggg
gcccggccgaggtctctggactcggtggtgaacagagggggctgccctgaggagcagcag
cagcagacagtgttcagccacgtccactaccaccgccacagacaccaccactacgaggaa
ggggagcacggccagggcccaggcaggggctctgatgaggagcagggggctacggctgca
tgccccgccccagctccggacaaggactcccccctgtgccccctcaagcacagcccctgc
cactgccccatagtagaccccattgacagacccatccctgtgacagaggaccaggaccat
gagcccagccccccctcaggccctcctgttctgttgccccctggccccttacagccccct
ccacccccctgctgccaccaggcccacggaccccccaacaggaggagcggccggctggga
ggctgcgtgatggacggaccctctgtgcgtttccatcagagcctggacctgcaggacgac
tgcagcatccacatccactacggccagggaccaggttactgctgccccccgccgcccgag
atgccccccgccctgctgcctgtgcctctcatcctggactcgggggccatagaggactgg
ccctgctgcggcggggcccacgtggtgtggcagaagcgggtgcagccggcccactcggag
ccccagctgccggggcccggagcccacatggacaggccccgctgccggctccaccacagc
cccaccacggagcgcagcatggacgtttgtttatactgccaaacgttacaccatcaggga
tcagaggaggagtctggcgtgtga
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