KEGG   Osmerus eperlanus (European smelt): 134039353
Entry
134039353         CDS       T10927                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep00565  Ether lipid metabolism
oep01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oep00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    134039353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oep03036]
    134039353
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oep04147]
    134039353
Chromosome and associated proteins [BR:oep03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    134039353
Exosome [BR:oep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134039353
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP ANAPC4_WD40 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_EML Beta-prop_DCAF4 Beta-prop_Vps41 WDR90_beta-prop_4th LisH WD40_RFWD3 LisH_PAC1 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH SutA-RBD LisH_2 DUF2570
Other DBs
NCBI-GeneID: 134039353
NCBI-ProteinID: XP_062341151
LinkDB
Position
19:10670815..10680433
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDVNEEGDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECVRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVTASKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVVVHPGGRFIVSCADDK
TLRIWDYKNRRCMKTLCAHEHFVTSLDFHRSAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggttctctctcagagacaacgagatgaactaaaccgagcgatagcagactacctccgc
tccaacgggtacgaggaggcgtactccactttcaagaaggaggcagagttagatgtgaat
gaagaaggagacaagaagtacgccggacttctggaaaagaaatggacctcagtcatcaga
ttacagaagaaggtgatggagctggagtcgaagctgaacgaggccaaggaggagatgact
cacgggggtccggtggcccagaagagggatcccaaggagtggatcccccgccccccggag
agatacgccctaagcggccatcgctcgcctgtcacgcgggtcatcttccacccagtcttc
tctgtcatggtcacggcctctgaagacgccaccatcaaggtgtgggactatgaggctggg
gactttgagcgcaccctgaagggccacacagactctgtgcaggacatctccttcgaccag
acaggcaagctgctggcctcctgctccgcagacatgaccatcaagctgtgggacttccaa
ggcttcgagtgcgtccgcaccatgcatggtcacgaccacaatgtgtcgtctgtagccatc
atgcccaacggggaccacatagtctccgcctcccgagacaagaccatcaagatgtgggag
gtggccactgggtattgcgtgaagacgtttacgggccacagagagtgggtgcgcatggtt
aggcccaaccaggacggttctctgatcgccagctgctccaacgaccagacggtgcgtgtg
tgggtgacggcctccaaggagtgcaaggcggagctgcgggagcacgagcacgtggtggag
tgcatcgcctgggcccccgacagcgcccaccccaccatcctggaggccactggctccgag
agtaagaagagtgggaagcctggcccattcctgctgtctggctccagggataaaaccatt
aagatgtgggacatcagcactggcatgtgccttatgactctggtgggccatgataactgg
gtacgtggtgtggtggtccacccaggaggcaggttcatagtgagctgtgctgacgacaag
accctgaggatctgggactacaagaacagacgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatttccaccggtctgctccctatgtggtgacgggcagcgtt
gatcagacagttaaagtctgggagtgtcgctga

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