Osmerus eperlanus (European smelt): 134039440
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Entry
134039440 CDS
T10927
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03320
PPAR signaling pathway
oep04120
Ubiquitin mediated proteolysis
oep04137
Mitophagy - animal
oep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134039440 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134039440 (ubb)
04137 Mitophagy - animal
134039440 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
134039440 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134039440 (ubb)
Ubiquitin system [BR:
oep04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
134039440 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
134039440
NCBI-ProteinID:
XP_062341296
LinkDB
All DBs
Position
19:complement(7321565..7324259)
Genome browser
AA seq
609 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagaccctcactggcaagaccatcacacttgaggttgagccaagc
gacaccattgagaacgtcaaggcaaagatccaggacaaagaaggcattcccccagaccag
cagaggttgatctttgctggcaagcagctggaagatggccgcaccctgtcagactacaac
atccagaaagaatccaccctccatcttgtccttcgcctcaggggaggcatgcaaatcttc
gtgaagaccctcactggcaagaccatcacacttgaggttgagccaagcgacaccattgag
aacgtcaaggcaaagatccaggacaaagaaggcattcccccagaccagcagaggttgatc
tttgccggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagaa
tccaccctccatcttgtccttcgcctcaggggaggcatgcaaatcttcgtgaagaccctc
actggcaagaccatcacacttgaggttgagccaagcgacaccattgagaacgtcaaggca
aagatccaggacaaagaaggcattcccccagaccagcagaggttgatctttgctggcaag
cagctggaagatggccgcaccctgtcagactacaacatccagaaagaatccaccctccat
cttgtccttcgcctcaggggaggcatgcaaatcttcgtgaagaccctcactggcaagacc
atcacacttgaggttgagccaagcgacaccattgagaacgtcaaggcaaagatccaggac
aaagaaggcattcccccagaccagcagaggttgatctttgccggcaagcagctggaagat
ggccgcaccctgtcagactacaacatccagaaagaatccaccctccatcttgtccttcgc
ctcaggggaggcatgcaaatcttcgtgaagaccctcactggcaagaccatcacacttgag
gttgagccaagcgacaccattgagaacgtcaaggcaaagatccaggacaaagaaggcatt
cccccagaccagcagaggttgatctttgctggcaagcagctggaagatggccgcaccctg
tcagactacaacatccagaaagaatccaccctccatcttgtccttcgcctcaggggaggc
atgcaaatcttcgtgaagaccctcactggcaagaccatcacacttgaggttgagccaagc
gacaccattgagaacgtcaaggcaaagatccaggacaaagaaggcattcccccagaccag
cagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtcagactacaac
atccagaaagaatccaccctccatcttgtccttcgcctcaggggaggcatgcaaatcttc
gtgaagaccctcactggcaagaccatcacacttgaggttgagccaagcgacaccattgag
aacgtcaaggcaaagatccaggacaaagaaggcattcccccagaccagcagaggttgatc
tttgctggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagaa
tccaccctccatcttgtccttcgcctcaggggaggcatgcaaatcttcgtgaagaccctc
actggcaagaccatcacacttgaggttgagccaagcgacaccattgagaacgtcaaggca
aagatccaggacaaagaaggcattcccccagaccagcagaggttgatctttgccggcaag
cagctggaagatggccgcaccctgtcagactacaacatccagaaagaatccaccctccat
cttgtccttcgtctcagaggagggcagtaa
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