KEGG   Osmerus eperlanus (European smelt): 134039478
Entry
134039478         CDS       T10927                                 
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03020  RNA polymerase
oep03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    134039478 (polr2j)
  09124 Replication and repair
   03420 Nucleotide excision repair
    134039478 (polr2j)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oep03021]
    134039478 (polr2j)
   03400 DNA repair and recombination proteins [BR:oep03400]
    134039478 (polr2j)
Transcription machinery [BR:oep03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     134039478 (polr2j)
DNA repair and recombination proteins [BR:oep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      134039478 (polr2j)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 134039478
NCBI-ProteinID: XP_062341353
LinkDB
Position
19:9457480..9458717
AA seq 117 aa
MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcacctccggcattcgagtcatttttgttgttcgaaggagaaaagaaaattact
attacaaaggacacaaaagttcccaatgcctgccttttcacgttgaacaaagaagatcat
acactggggaacatcatcagatcacaactgctgaaagacccccaggtgctctttgctggc
tataaagttcctcatcctctggagcacaagattgttatacgtgttcagaccactccagac
tacagtcctcaggaagctttcaccaatgccatcaccgatctgatcagtgagctgtctctg
ctggaggagaggtttagggttgctatcaaggacaagcaggaagggattgaatga

DBGET integrated database retrieval system