Osmerus eperlanus (European smelt): 134039560
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Entry
134039560 CDS
T10927
Symbol
dscama
Name
(RefSeq) Down syndrome cell adhesion molecule a isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
oep Osmerus eperlanus (European smelt)
Brite
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
DSCAM family
134039560 (dscama)
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GFIT
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NCBI-GeneID:
134039560
NCBI-ProteinID:
XP_062341471
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Position
19:complement(9021325..9094454)
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AA seq
2048 aa
AA seq
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MWILANIFFQCILNVFSEDLRSSLYFVNASVQEVVFASTTGTSVPCPAAGAAPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHFPPSSFSNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPPSVEAYITVVSWEKDTMSINAEMSRFLITSTG
ALYILDVQIEDGLYNYRCMTRHRYTGETRQSNSARLFVSDPTNSAPNILDGFERREVMAS
HRVELPCKASGHPVPKYRWLKDNRPLEPDTRFRQSVTGLLIERAQPSDTGGYVCEVWNSY
GNAEVVGRLLVKEPLKAVVSPRKVKGSVGSQVSLSCSVTGSEEYELSWYRNGELIYPGNS
VRMTGDNRENLVMAGMAKSDGGAYQCFARNGKMSAQDFVQVILEDGTPKILSSFSEKVFN
INEFVSLACTVKGTPEPRVAWLLDDEPVSRDSRHRMSHFTNAEGHVISHLNISHTHVPDG
GVYRCTCNNSAGAVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWYK
DSNLLPYNHRQRAFENNGTLKLYDVQKDVDEGEYTCHVLVQPQLSTHQSVHVSVKVPPAI
HPFEFPRFSIGQRVFIPCVVMSGDQPVFITWQKDGRPIPASLSVTIDNIDFTSSLRISNL
SLLHNGNYTCIARNQAAAVEHQSQLIVRVPPKFVVQPKDQDGIYGKAVILNCSAEGYPVP
TIQWKYSKVGLDGGVVDGNRSSQRTNNSGAGVPQFQPIALNSGFRVQVLVNGSLLIKHVL
EEDSGYYLCKVSNDVGADVSKSMYLNVKIPAMITSYPNTTLATQGEEKKMSCTAHGEKPI
MVRWEKEERIINPETSRYVVTVKEVADEVISTLQIMPTVREDSGFFSCHAINSYGEDRGI
IQLTVQEPPDPPEVEIREVKDRTIALRWTMGFDGNSPITGFDIESKNKSASWDTAQKTKD
VSPQLNQATIIDLHPSSTYNIRMFAKNLIGKSEPSNELTITTDEAAPDGPPQEVQLEALS
SQSIRVSWRAPKKHLQNGAIRGYQVGYREYSSGGNYQFSVISMETTGDNSESLILDNLKK
FTQYGVVVQASNSAGTGPSSAEVSSTTLEDVPSRPPENVQATASSPEIISLSWLTPPKEA
LNGNLLGFRVIYWANLPDGELGEIRNVTTSKPSLELDGLEKYTNYSIQVLTFTRAGDGVR
SEQIYTRTKEDVPGPPAGVKAAAASNSVVFVSWLPPLKLNGIIRKYTVFCSNPHPTVSSE
FEAAPDVFFYRIPNLSRTRQYSIWVVAVTAAGRGNASDIITIKPLAEAPARILTFNGTVT
TPWMRDIVLPCKAVGDPAPTVKWLKETNGSPAPAVIDSRRSVHGNGSLVIRTVKAEDSGN
YTCVASNSFGPDKIILNLQVQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQY
SEDNSEQWGNYAISPSERSYRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQ
YSKDQELFTSINATRVRLNLVGWNNGGCPITSFTLEYRPVESPAWTTAQRTSLTKSYILY
DLQEATWYELQMKVYNSAGFAEKRVKFATLSYDGSTIAPLVRAPNGPPEGSSSGNEGLKM
MVTISCVLVGIVLVFTLLLVLRRRRREQRLKRLRDAKSLAEMLMSKNTRPAETINKQQQT
LRMHIDIPRAQLLIEERDTMETVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQAT
GPLVDVSDARPGTSKSNPTARRTAKAGPAARNRYASQWTLNRPHPPVSAHTLSTDWRLPT
PRVAGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKF
TITECFISDTSSEQMTAGTNDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKA
HRPGGELVHLPPYLRMDFLLNRGMSCSGTSRGGASGEGAMGQACLEPQKSRSLKRPSRMA
PPTPTEAPQASRDPVAQWQPGSAATLPHREGSELAQAAKLSTSQESLLDSRGHLKPSSNP
YAKSYTLV
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctaatatctttttccagtgcatcttgaatgttttcagtgaagaccta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgttcgccagcaccaca
gggacctcggtgccctgtcccgccgcgggcgcggcccccgcctcgctgcgctggtacctg
gccacgggcgaggagatctacgatgtgcccgggatacggcacgtgcaccccaatggcacc
ctccagatcttccacttccccccttccagcttcagcaaccttatccatgacaacacctac
tactgcacagccgagaatccatcagggaaaatcaggagccaagatgtccatattaaggct
gtcctacgagagccctacacggtccgagtggaggaccagaaagcaatgaggggcaatgtg
gcggtcttcaagtgcattatccccccctctgtggaggcctacatcactgttgtgtcctgg
gagaaagacacaatgtcaatcaacgctgagatgtcgcggtttctcatcacatccacgggg
gcgctgtacatcctggacgtgcagattgaggacggcctgtacaactaccggtgcatgacg
cgccaccgctacaccggggagacgcggcagagcaacagcgctcggctctttgtctccgac
cccacgaactcggcgcccaacatcctggatggctttgagcgtcgcgaggtcatggcgtct
caccgggtggagctcccgtgcaaggcgtccggtcacccggtgcccaagtaccgctggctg
aaggacaaccgccccctggagcccgacacgcgcttccggcagagcgtcacaggcctgctt
atcgagcgagcccagcccagcgacacggggggctacgtgtgcgaggtgtggaacagctac
ggcaacgctgaggtggtgggccggctgctggtcaaagagcccttgaaggcggtggtgagc
cccaggaaggtgaaaggcagcgtgggtagccaggtgtccttgtcctgcagcgtgactggc
tccgaggagtacgagctgtcctggtaccgcaacggagagctcatctaccctgggaacagc
gtccgcatgacgggggacaaccgggagaatctggtgatggcgggcatggccaagagcgac
ggcggagcctaccaatgcttcgccaggaacggcaagatgtccgcccaggacttcgtccag
gtcatcctggaagacggcactcccaagatcctctcctccttcagcgagaaggtcttcaac
atcaacgagtttgtgtcactggcgtgcaccgtgaagggcacgccggagccgcgcgtggcc
tggctgctggacgacgagccggtgagccgggacagccggcaccgcatgtcccacttcacc
aacgccgagggccacgtcatcagccacctgaacatcagccacacccacgtgccggacggg
ggcgtctaccgctgcacctgcaacaattcggccggggcagtctcctaccaggcgcgaata
aacgtaagagggcctgccagtatacgaccaatgaaaaacctcacagccatcgccgggcga
gacatgtacatccactgccgcgtcattggctacccgtactactccatcaagtggtacaaa
gactccaacctgctgccgtacaaccaccggcagcgtgcgttcgagaacaacggcacgctg
aagctgtacgacgtgcagaaggacgtggacgagggcgagtacacgtgtcacgtcctggtg
cagccgcagctctccacccaccagagcgtccacgtcagcgtgaaagtcccccctgccatc
catcccttcgagttccctcgcttctctatcggccagcgggtgttcatcccctgcgtggtg
atgtcgggcgaccagcccgtcttcatcacctggcagaaggacggccggcctatcccggcc
agcctgagcgtcaccatcgacaacatcgacttcaccagctccctgcgcatctccaacctg
tccctcctccacaacggcaactacacctgcatcgcccgcaaccaggcggcagccgtggag
caccagagccagctcatcgtgagggtcccccctaagtttgtggtgcagcctaaagaccag
gatggcatctatggaaaggctgtgatcctcaactgttctgcagagggctaccctgtccct
accattcagtggaagtactccaaagtgggtcttgatggaggtgtggttgatggaaaccgt
tcaagtcaacgtaccaataactctggtgcgggtgtgcctcagttccagcccatagccctc
aactcaggcttcagagtccaggtgctggtcaacggctccctgctcatcaagcacgtgctg
gaggaagacagcggctactacctgtgcaaggtcagcaacgacgtcggcgccgacgtcagc
aagtccatgtacctcaacgtcaaaatcccggccatgatcacgtcgtaccccaacaccacg
ctggccacgcagggcgaggagaagaagatgagctgcacggctcacggcgagaagcccatc
atggtccgctgggagaaggaggagcgcatcatcaacccggagaccagccgctacgtggtc
accgtcaaggaggtggccgacgaggtcatctccacgctgcagatcatgcccaccgtgagg
gaggactcgggcttcttctcctgccacgccatcaactcctacggagaggaccgaggcatc
atccagctcactgtgcaagagcccccggaccccccagaggtggagatcagggaggtgaag
gacaggactattgcccttcgttggaccatgggctttgacggcaacagtccaatcacaggg
ttcgacatcgagagcaagaacaaatcagcctcctgggatacggcccagaagaccaaagac
gtctccccccagctcaaccaggccaccatcatcgacctccacccctcctccacctacaac
atacgtatgttcgccaagaacctcatcggcaagagcgagcccagcaacgagctcaccatc
accacggacgaagcagctcctgacggccccccacaggaagtgcagctggaggctctctct
tcccaaagcatccgggtgtcatggagggcccccaagaagcaccttcagaatggggcgatc
cggggctaccaggtgggctacagggagtacagctccggggggaactaccagttcagcgtg
atcagcatggagaccacaggggacaacagcgagagcctgatcctggacaacctgaagaag
ttcacccagtacggcgtggtggtccaggctagcaacagcgccgggaccgggccctcctcc
gcagaggtgtcctccactaccctggaagacgtacccagccgccctccagagaacgtccag
gccacggcctcctccccagagatcatctccctgtcctggctcacccctcccaaggaggct
ctcaacggcaacctgctgggcttcagggtcatctactgggccaacctaccagatggagag
ctgggggagatccggaacgtgaccacctcaaagccttccctggagctggatggtctggag
aagtacaccaactacagcatccaggtgttgaccttcacccgggccggggacggtgtccgc
agcgagcagatctacacgcgcaccaaggaggatgtccctggtcctcccgccggcgtgaag
gcagcagcggcgtctaactcggtggtgtttgtgtcctggctccctcctcttaaactcaat
ggcatcattaggaagtatacggtcttctgctccaatccacaccctacggtgagcagtgag
tttgaggcagcgccggacgtgttcttctaccggatccccaacctgagcaggacccgtcag
tacagcatctgggtggtggccgtgaccgccgcggggcgcggcaacgccagcgacatcatc
accatcaaacccctggccgaggcccctgccaggatcctaaccttcaacgggaccgtcacc
accccttggatgagggacattgtgttgccctgtaaggcggtcggtgaccccgcccccacg
gtcaagtggctgaaggaaaccaacggaagccccgcccctgctgtgattgacagccggcgc
agtgtccatggcaacggtagcctggtgatccgcacagtgaaagccgaggactctgggaac
tacacctgtgtagccagtaacagcttcggccctgataagatcatcctaaacctgcaggtt
caagttcccccggaccaaccacgcctaaccgttaccaagacaaccaccacatccatcacc
ctgtcctggatacccggggacaatggaggcagctccatcagaggctacatcctgcagtac
tcagaggacaacagcgagcagtgggggaactacgccatcagccccagcgagcgttcctac
cggctggagaacctcaagtgtggaacctggtacaagttcaccctgacggcccagaatgca
gtggggccgggacggatcagcgagatcatcgaggccaagacccacgggaaagagcctcag
tactccaaggaccaggagctgttcacgagcatcaacgccacgcgcgtcaggctcaatctg
gtcggctggaacaacggcggctgccccatcacgtccttcaccttagagtaccgcccggtg
gagtcgccggcgtggaccacggcccagcgcacatcgctgaccaagagctacatcctgtac
gacctgcaggaggccacctggtacgagctgcagatgaaggtgtacaacagcgcgggcttc
gccgagaagagggtcaagtttgccacgctcagctacgacggcagcaccatcgcccctctg
gtcagggctccaaacgggcctccagaaggcagctcgtcaggcaacgagggtctgaagatg
atggtgaccatctcctgcgtgctggtgggcatcgtgctggtcttcaccctcctgctggtg
ctgaggaggaggaggagggaacagaggctcaagaggctgagagatgctaaaagtttggct
gagatgctcatgagtaaaaacaccagaccagcagagaccattaacaagcagcagcagacc
ctgcgaatgcacatcgacatcccccgagcccagctcctcatcgaggagagagacaccatg
gagactgttgacgacaggtccaccgtgctgctgacggacaacgactttggggagacccag
aaacagaagtcctccacggtgacgcacacagtccactaccagtccctgtcccaagccacc
ggaccactggtggacgtgtccgatgccagacctggaaccagtaagtccaaccccacagct
cggcgtaccgccaaagctggccctgccgctcgcaaccgctacgcaagccagtggaccctc
aacaggccacacccccctgtctccgcccacacgctgagcactgattggaggcttcccacg
cccagagtggcaggttctgtggacaaggagagtgacagctatagcgtcagcccatctcag
gacacagaccgggcgcggagcagcatggtctccacggagagcgcctcctccacatacgag
gagctggcgcgggcctacgagcacgccaagatggaggagcagctgcgccacgccaagttc
accatcaccgagtgcttcatctccgacacgtcctcggagcagatgacggcgggcaccaac
gactacacggacagcctgacctccagcacgccctccgagtcgggcatctgccgcttcacc
gcctccccgcccaagccccaggacgtcagccgcgtcatgaacatggccgtgcccaaggcc
cacagaccggggggcgagctggtgcacctgcccccatacctgaggatggacttcctgctc
aaccgtggcatgtcatgctcggggacatccaggggcggagccagcggagagggcgcgatg
ggccaggcgtgtctggagcctcagaagagccgctccctgaaacgcccctcacgcatggcc
ccccctacgcccactgaggccccccaggccagcagggacccagtggcccagtggcagccc
ggctcagctgccacgctgccccacagagagggctcggagctggcccaggctgccaagctc
agcacctcccaggagtccctgctggactccagaggacacctcaaaccgagcagcaacccc
tacgcaaagtcctacacgctggtataa
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