Osmerus eperlanus (European smelt): 134039693
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Entry
134039693 CDS
T10927
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134039693 (zc3h12b)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
134039693 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
134039693
NCBI-ProteinID:
XP_062341695
LinkDB
All DBs
Position
19:14033715..14040953
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AA seq
974 aa
AA seq
DB search
MVLELTVPASAGPLLYRSVSYIERVFRVRVNHRSAVSSCNGATASTSSIVISVEEGEEDD
CTKAKDYIVSLTSPAHRKREHLTLTLHKQLQLLKSTIEYESQAVVEAKEHVVEISGGEAN
VMTAWSMVERLKMETCPCREENSGLREAQHASGESEEGSSSESESEQQLQLQVSGGICCR
RREPFVTNKPHRQLCRSPCLDRPSFSQSSTLQDPRTEEAKVGAVFRPASDREYQTKMEFA
LKLGYSGEQVETVLNKLGASALINDVLAELVRLGNKEEPDSQAGSGTASSVSRGGAGPKE
AVSPEASLEDESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDIT
VFVPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERASQPQRSVADELRAFAKLSAVKTMSEGALAK
CGTGPATSKGDFGSEAKRVAPKRQSDPSIRSVACEPDERLSAVRKPEANSVPSLVSALSV
PTMQPAKSHAAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPPILVTNSHGASVTYSEQ
FPKYDSVSDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGAYQRPPGHRAESCLSHSTS
DSFSSYGDLYMSSVDSSLDDSVKGQQQSPAQSRLQAFSHGFHHDTLTRVQSYGPEEPKQG
PRKQSISHLAPHTQHPVVGARSSCPGDYPLPQNTLPSSSSQPGRSLGMTRMDSISDSRLY
ESNPMRQRRPAPGLRRPPLCREQHASWDPLPCGESYGYHSFPLSNSLMQPCCEKVMVRSM
PDKMEQIWRSPWENPLPHEHQERHIIPEHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQ
QLAAVIVTKLRSRH
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctcacagtgcccgctagtgcaggccccttgctttaccgctccgtttcg
tacattgagcgagttttccgggtgagggttaaccacagatccgccgtgtcaagctgcaac
ggcgcaactgctagcaccagcagcatagttatctctgtcgaagagggtgaagaagatgac
tgcaccaaggcaaaggattacatagtatcgctgacctcaccagctcacaggaagagggaa
catctaacactgactttacataaacagcttcagctgctcaagtcaaccatcgagtatgag
tctcaggccgtagtggaggcgaaggagcatgtggtggagatctcagggggggaggctaac
gtgatgacagcatggtccatggtggagaggctcaaaatggagacgtgcccttgcagggag
gagaacagcgggctgagggaagcccagcatgctagcggcgagtccgaggagggcagcagc
tctgagagcgagtcagaacagcagctgcagctgcaggtgagcggtggcatctgctgcagg
aggagggaaccgttcgtcaccaacaagccccaccgccagctctgtcgctccccctgcctg
gaccggcccagcttctcccagagcagcaccctgcaggacccccgcacggaggaggccaag
gtgggggcggtcttcaggcccgccagcgaccgggagtaccagaccaagatggagttcgcc
ttgaagctgggctactccggggaacaggtagagaccgtcctgaacaagctgggggcgtcc
gccctcataaacgatgtcctggctgagctggttagactggggaacaaggaggagccggac
agccaggccggcagtggcacggcctcctccgtgtctcgggggggcgcgggccccaaggag
gccgtcagccctgaggcctccctggaggacgagtcggtggacacctacgacaacctccga
cccatcgtcatagacggctccaacgtggcgatgagccatggaaacaaagaggttttttcc
tgccgtggcatccagttggctgtggaatggtttctggagaagggacacaaagacatcaca
gtatttgtccctgcctggaggaaagagcagtcaaggcctgatgcccccataacagatcaa
gacattttgcgaaagctggagaaagagaagattctggttttcactccatcaaggcgtgtc
cagggaagaagagtggtgtgctacgacgatcgcttcatagtgaagctggcctgtgactct
gatggcattattgtgtcaaatgacaactacagggacttgcagaacgagaagccagagtgg
aagaaattcatagaggagcggttgctaatgtactcgtttgtcaacgacaaattcatgcct
cctgatgatccgttgggaagacacggacccagcttagagaatttcctccgcaagcggcct
gttgtcccggagcacaaaaagcaaccttgtccatacgggaagaagtgcacctatggccac
aaatgcaagtactaccacccagagcgagccagccagccgcagagatcggtggcagatgaa
ctgcgggcgtttgccaagctgtctgccgttaagacaatgagcgaaggggctctggccaag
tgtggcaccggcccagcgaccagcaaaggggacttcggctcggaggccaaacgcgtggcc
cccaagcgccagtccgaccccagcatccgctcagtggcctgtgaaccagacgagagactg
tctgccgttcggaagccggaggccaattctgtgccttctcttgtgtcggcactcagcgtg
cccaccatgcagcccgccaagagtcacgcagccggtgccctgaacaccagatccgccagc
agccccgtgccgggatcactccagttcacccacagctccctggaacacatgtccagcgtg
cagtaccctcccatcctagtcaccaacagccacggcgcctccgtcacttacagcgaacag
ttccccaagtacgactccgtgagcgaccacgggtactactcgatgctgagtgatttttcc
aacatgagcatgagcagcatgcacaacgtggacagcttctgtagcatggagcacgagcat
ggggcgtaccagaggcccccgggccaccgtgcagagtcctgcctcagccactccaccagc
gactccttctcctcctacggggacctgtacatgagctccgtggacagcagcctggacgac
agcgtgaagggccagcagcagtctcccgctcagagccgcctccaggccttctcccacggc
ttccatcacgacaccctgaccagggtgcagagctacggccctgaggagcccaagcagggc
ccccggaagcagtccatatcccacctggctccccacacccagcaccctgtggttggagca
aggtcgagctgtcctggggattaccccctacctcagaacacgctcccctcctcgtcctcg
cagcccgggcgctcactgggcatgactcgcatggacagcatctccgactcccggctgtac
gagagcaaccccatgaggcagaggaggccggctcccggcctgaggagaccccctctgtgc
cgggagcaacatgccagctgggaccctctgccgtgcggcgagtcgtatgggtaccactcg
ttccccctcagcaacagcctgatgcaaccctgctgcgagaaagtcatggtccgcagcatg
cctgacaagatggagcagatctggcggtcgccgtgggagaacccgttgccgcacgagcac
caggagcgccacatcatcccggagcatcagtaccaaacgtaccgcaacctctgcaacatc
tttcccgcttacgtggttcattccgtcatggagaagaaccctcacctgaccgacccccag
cagctagcggccgtcatcgtcaccaagctgaggtcgcgccactga
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